Sardina pilchardus (sardine): 134062637
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Entry
134062637 CDS
T10667
Symbol
caprin2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spil03019
]
134062637 (caprin2)
Messenger RNA biogenesis [BR:
spil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
134062637 (caprin2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
C1q
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
134062637
NCBI-ProteinID:
XP_062374698
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Position
17:complement(3722929..3731675)
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AA seq
979 aa
AA seq
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MLGIFARSPQRPRFHHHTERVRSVSETPNMVQLSASPEPDMSPSPSRHSGEVEEKHGSPK
SDCSPRSLTSLQLALSASTTAYPGYETYIEDGLICLKHKIRNIEKKKLKLEEYRRRLKSG
EKLNEDQLDAVKKYEEVIHNLAFAKELHKTLSSLTQDLLKAQKKAVKREQVVRMEAERKR
LCTVLQMQYVLQSLQHEHVRKDVLNSASRPLLISAKELEGLRDLGTLLNRKKDDHSSLED
EMMRGAIVYWELLEGKEKPVVGHTYKHMKEWLAKLMDCGYFDQVVAPKDQKESENHVRPG
GLAALVKFRTNEVPTRVFLNRHYIPDEGLNDGSLDKNSPSLNWKEDFLARKEQEPPDSWE
MEFNDAPPSSKTTALQKPSRGAAGFILKDQSSVKKPNTEPKPKAQRRPKSGQDVKSASRT
ETPVEVFNSPSPLPKDPILRKQELDDLMGQISGSFSFMQESLLDGEAPQTHVHPRICCPS
PVPSPVPTPPLARRESSDSSDDHPPKSMHSTPLPSKHLAKEGNTSLTNGNKSLDNWDLNA
HSVEEVEEKPQLSSREGFESPPLFRRKSSIPITPEEKLPPETPVPQPEQQQSPRDVVTPP
ATESAQAFSTPPNRQAHSISAPSAPYQSMHPVFKVSVPTPLSSGSYLKPDGTPLSGSNCV
RYATASTQTPPELNPPEAENLQPDDLIQSECMVVSGGQMYTMGRPGQPYHVRGSVRGMGR
AGRGLAHYVRSPGGHRGGFDGYRTSPRSAGGFVPQSYSMRDMTSTPINAREGGYHSNYKH
GGPGGQRANSSAGWSDSSQVSSPDREGTYMVDLVDSGHGDSLSADMPITPQGAHTLMPLH
VYPISQQIRVAFSAARTFNFAPGTLDQPIAFDLLHSNVGEMFDMPSGRFTCPVSGTYVFI
FHMLKLAVNVPLYINLMRNDEVVVSGYANDGAPDHETASNHAVLQLYQGDQLWLRLHRGA
IYGSSWKYSTFSGFLLYQD
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgttgggcattttcgctcggtcaccacaacgaccccgcttccaccaccatacagaacga
gtgagaagcgtaagtgagactcccaacatggtgcagttgagtgcatccccagagcccgat
atgtccccctctccatctcgacactcaggggaggttgaggagaagcatggaagcccaaag
tctgactgctctccgcgctccctcacctccctgcagcttgcactctctgcctccaccacc
gcctatcccggctacgagacttacatagaggatggccttatctgcctcaagcacaagatt
cgtaacattgagaaaaagaagctaaaactggaggagtacaggaggcgcttaaagagtggt
gaaaaactcaatgaagaccaactggatgcagtgaagaagtatgaagaagttatccataac
ctggcatttgcaaaagagctgcacaagacccttagttcattgacacaggacctgctgaag
gctcagaagaaggcggtgaagcgtgagcaggtggtgaggatggaggctgagcgcaagcgc
ctgtgcaccgtgctgcagatgcaatacgtcctgcagagcctccagcacgagcacgtcagg
aaggacgtcctgaacagcgccagccgcccgctgctcatctccgccaaggagctggagggc
ctgcgggaccttggtaccctgctgaaccgcaagaaggatgaccacagcagtttggaagat
gaaatgatgcgaggagctattgtctattgggagcttctggaggggaaggagaaaccagtt
gttggtcacacatataagcacatgaaggagtggctggcaaagctgatggattgtgggtac
tttgaccaagtcgtggctcccaaagaccagaaggaatcagagaatcatgtgagaccagga
ggtcttgcagcccttgtgaagttcaggacaaatgaagtgcctaccagagtgtttcttaac
agacactatatacctgatgaaggcctcaatgatgggagtctggacaagaactccccttcg
cttaactggaaagaagacttcttggcccgcaaagagcaggagcctccagactcatgggaa
atggagttcaatgatgcgccaccttcctcgaagactacagcactacaaaaaccaagcaga
ggggcagctggtttcatcctgaaagatcagagctctgtgaagaaacccaacactgaacct
aaaccgaaagctcagagaagacctaaatctggacaggatgtaaaatcagcatctcgaaca
gagactccagtggaggtgttcaactcgccatctcctctgcccaaagatcccattttacga
aagcaggagctggacgacttgatgggtcagatttcaggatccttcagcttcatgcaggag
tcattactggatggtgaagcgcctcaaacacatgtgcatcctaggatttgttgtccctct
cctgtaccctctcctgtacccacccctccacttgcccggagggaatccagtgatagttca
gatgaccaccctcccaaatccatgcattctaccccactgccttcaaaacatcttgccaaa
gagggtaatactagtctgaccaatgggaataagagtctggacaactgggacctgaatgcc
cattcagtggaagaggtagaggagaaaccacagttgtctagtcgagagggctttgagtct
cccccacttttccgccgcaagtctagtatcccgatcacgccggaagagaaactgcctcct
gaaactcctgtgccacagccagagcagcagcagtctcctcgtgatgtggtgacgcctcca
gccacggagtcagctcaagccttctccactccaccaaaccgccaagctcacagcatctca
gccccgtctgctccctaccagtctatgcatcctgtgttcaaagtcagtgtgcctacacca
ttaagcagtgggtcttacttgaagcctgacggcacaccactctctggatccaattgtgtg
agatatgccactgccagcacccagaccccacctgagctcaacccacctgaggcggaaaac
cttcagccagatgacctgatccagtccgagtgtatggtggttagtggtggccagatgtac
acaatgggacgcccgggccagccttaccatgtgcggggctctgtcagaggtatgggacgc
gcgggcaggggactggcgcactacgtccgctcacctggtggccacagaggagggtttgat
gggtacagaaccagccccagatctgctggaggttttgttccacagtcttattcgatgaga
gacatgacatccactcccattaatgcaagggagggcggataccattctaattacaaacat
ggtggcccagggggacagagggccaactccagtgctggatggagcgactcgtctcaggtg
agcagccctgatcgggaggggacgtacatggtggacctggtggactctggccacggtgac
tcgctctccgccgacatgccgatcactccccagggggcgcacaccctcatgcccctgcac
gtgtaccccatctcccagcagatcagggtggccttctccgccgcccgcaccttcaacttc
gccccgggcactctcgaccaaccgatcgccttcgacctgctgcacagcaatgtcggcgag
atgttcgacatgccgtccgggcgcttcacctgcccggtgtcgggcacctacgtcttcatc
ttccacatgctcaagctggcggtcaacgtgccgctttacatcaacctcatgcgcaacgac
gaggtggtggtgtccggctacgccaacgacggagcgcctgaccacgagacggcgagcaac
cacgccgtgctgcagctctaccaaggcgaccagttgtggctgcggctgcatcggggcgcc
atctatgggagcagctggaagtacagcaccttctcaggcttcctgctgtatcaggactga
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