Sardina pilchardus (sardine): 134063437
Help
Entry
134063437 CDS
T10667
Symbol
gbf1
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134063437 (gbf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134063437 (gbf1)
Membrane trafficking [BR:
spil04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
134063437 (gbf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
DUF1045
TNFAIP8
Gp6_C-III
Motif
Other DBs
NCBI-GeneID:
134063437
NCBI-ProteinID:
XP_062374879
LinkDB
All DBs
Position
18:2547400..2666721
Genome browser
AA seq
1833 aa
AA seq
DB search
MVDKHIYIVQGEIATVVGAIKRNSRTTHTPLDEEQDPLLNSFSHLKEVLNSIKALSDVEP
NVFLRPFLEVVRSEDTTGPITGLALTSVNKFLSYGLIDSNHEGAAEGIENMADAVTHARF
VGTDPASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEMRLSELLRKSA
EHTLVDMVQLLFSRLPQFKEEAKSFVGTNMKKLKMRAGGMSESSKWKKQKRSPRPPHHMV
RSASGSVDASSNSQSGLPYVEQSGLPVSDSVSSMSSPTTDSGLDSGSKTTSREDLSDLEQ
PSSTATTPLSPASDSCTPHAQCDVERAQSASVESIPEVLDRDSLADQSDSTSVHDMDYVN
PRGVRFTQSTQREGAALIPYGLPCLRELFRFLISLTNPHDRHNSDVMLHMGLQLLTVALE
AAHIAPYQSLLVLVKDELCRHLFQLLSVDRINLYAASIRVCFLLFEGMRGHLKFQLEMYL
KKLMGLITSENPKLAYEMKEMALDALVQLWRIPSLVTELYINYDCDFYCSNLFEDLTKLL
SKNAFPVSGQLYTTHLLSLEALLTVIDSTEAHCQAKVLNSSAQQDQSETLTSEGEGTANA
SAETLKVDGSSPGTTNGVTAAAEATPTCPPTSGHLMAEKMKLGRQEQEEADTAEKKTPKK
PHRFSTCLPDSQELNDIKIKKKLLITGTEQFNQKPKKGIQFLQEKGLLSSPMDNSEVAQW
LRENPRLDKKMIGEFVSDRKHMELLDSFVNTFQFQGLRIDEALRLYLEAFRLPGEAPVIQ
RLLETFTDNWHKVNGSPFMTNDAGFALAYAVIMLNTDQHNHNVRKQNIPMTVEQFKKNLK
GVNGSKDFDQDMLEDIYNAIKTEEIVMPDEQSGLVKENYVWSLLLHRGATSEGLFLHTPP
ASYDHDLFSMTWGPTIAALSYVFDKSLDDTIIQKAIAGFRKCAMISAHFGFSDVFDNLII
SLCKFTTLSSESVENLPTVFGSNLKAQVAAKTVFSLAHRHGDILREGWKNIMDSMLQLFR
AELLPKPMVEVEDFVEPNGKISLQREETPSQRGESAVLSFVNWLTLSGAEQSGLRGPSTE
NQEAKQAALLCIKQCDPEKLITESKFLQLESLQELMKALISVTPDEETYDEEDAAFCLEM
LLRIVLENRDRVSCVWQTVRDHLCHLCVHANESCFLVERAVVGLLRLAIRLLRREDISSQ
VLLSLRLLLMMKPQVLWRVSREVAYGLHELLKTNAANIHSTDDWYTLFSLLECIGAGVKP
PAALQMSAGNTDHDTGAQSDSEVSSHHPSEVSVDRGYTSDSELYNEQHAKSRMPRSTTDV
DVATSGWLVVGKEDVDSSKVCVGVGGSRPLLSPLVNQYSLTLGQDMGLHDTKSLIKCTES
LSFIVRDAAHVTPENFELCVKTIRVFVEASLNGGYRTHEKKKSHKYDKSSRLRKKPREKD
VASRRAKASQRLSRSHSDDEEDEGVPASYHTVSLQVSQDLLDLMHTLHTRAASIYSSWAE
EQRHLEAAGRKIEADSHTLWSSCWCPLLQGMAWLCVDARRQVRMQALTYLQRALLVHDLQ
TLDAAEWESCFNKVLFPLLTKLLDNISPADVGGMEETRMRACTLLSKVFLQHLSPLLSLP
TFAALWLTILDFMDKYMHAGSSDLLLEAIPESLKNMLLVMDTAGIFLSSDSRTGYSALWE
ITWERIDCFLPHLREELFKQAVMPEPVPSVPVEPPQPAAPSPPPTEPKAPSRPASPQDTT
APPSANGTDRSSPVPPPTPPLPTPVKMSPPPESPPSLSQSPLILQPLASPLQVGVPPMSL
PIILNPALIEATSPVPLLTAQRPIDPADPTEVK
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
atggtggacaagcatatctacattgttcaaggggagatcgcaacggtagtgggtgccatc
aagaggaactccaggaccacacacactcccctggacgaagaacaggatcctctcctcaac
agcttcagccatctgaaggaagtcctgaacagcatcaaagctctgtctgatgtggagccc
aatgtcttcctgaggcccttcctggaagttgtgcgttccgaagacactaccggaccaatc
acgggcctcgctctcacctccgtcaacaagttcctctcttatggccttatagactccaat
catgaaggggcagccgagggcatcgagaacatggccgacgccgtcacacacgcacgcttc
gtgggcaccgaccccgccagtgacgaggtggtgctgatgaagatcctgcaggttctgagg
acactgctgctgacgccggttggagcccatctgaccaatgagtctgtgtgtgagatcatg
cagtcatgcttcaggatctgctttgagatgagactcagcgagctcctgaggaagtcggcg
gaacacacactggtggacatggtgcagctgcttttctccagattgccccagtttaaggag
gaggccaagagcttcgtggggaccaacatgaagaagttgaagatgcgtgcagggggtatg
agcgagtcgtccaagtggaagaagcagaagcgttcgccccgcccccctcatcacatggtc
cgcagcgcctcgggatcagtggacgccagcagcaacagccaatcaggcctgccgtacgta
gagcagtcggggctgccggtgtcggacagcgtgtcgtccatgtccagccccacgacggac
agcgggctggactcgggctccaagaccacctcccgggaggacctctccgacctggagcag
cccagctccacggcaaccacaccgctcagccccgcctccgactcctgcactccccacgca
cagtgcgatgtggagcgtgcccagtcggcctcggtggagtccatcccggaggtgttggat
cgggactccttggctgaccagtccgactccacctctgtccacgacatggactacgtcaac
ccaagaggagtccgcttcacccagtccactcagagagagggtgcagctctgatcccctac
gggctgccgtgtctgcgggagctgttccgcttcctgatctcgctgaccaacccgcacgac
cggcacaactcggacgtgatgctgcacatgggcctgcagctgctcaccgtggccctggag
gctgcgcacatcgccccctaccagtcactgctggtactggtcaaagacgagctctgcagg
cacctcttccagctgctgagtgtggaccggatcaacctctacgctgcctccatcagagtg
tgtttcctgctcttcgagggcatgagggggcacctcaagttccagctggagatgtacctg
aagaagctgatggggctgatcacgtcggagaaccccaagctggcgtacgagatgaaggag
atggcgctggatgctctggtgcagctgtggaggatccccagcctggtcaccgagctctac
atcaactacgactgcgacttctactgctccaacctcttcgaagacctcaccaagctgctc
tcgaagaacgccttcccagtgtctgggcagctctacaccacacacctgctgtctctggag
gcgttgctcaccgtgattgacagcacagaggcccactgccaagccaaggtgctcaacagc
tcagcgcagcaggaccaatcagagaccctgacgtctgagggggaggggacagccaacgcc
agcgctgagactttgaaggtggacggatcttcgccaggaaccaccaatggcgtcacagcg
gcagctgaggccacgcccacctgcccgcccaccagcggccacctgatggcagagaagatg
aagctgggacgacaagagcaggaggaggccgacaccgcagagaagaagacccctaagaag
ccccacaggttctccacctgcctacccgactcccaggagctcaacgacatcaagatcaag
aagaagctgctgatcaccggtacggagcagttcaaccagaagcccaagaagggcatccag
ttcctgcaggagaagggtctgttgagcagccccatggacaacagcgaggtggcccagtgg
ctccgggagaacccgcgcctggacaagaagatgatcggagagttcgtcagcgaccgcaag
cacatggagctactcgacagcttcgtcaatacgttccagttccagggcttgcgtatagac
gaggcgttgcgcttgtatctggaggccttccggctccccggcgaagccccggtcattcag
cgcctcctggaaaccttcaccgacaactggcataaagtgaatggctctcccttcatgacc
aacgatgctggatttgctctggcctacgccgtcatcatgctcaacactgaccagcacaac
cacaacgtccgcaagcagaacatccccatgaccgtggagcaattcaaaaagaacctgaag
ggcgtcaacggctccaaagactttgaccaggacatgctggaggatatctacaatgccatc
aagactgaggagattgtgatgccagacgagcagtcgggtctggtgaaggagaactacgtg
tggagtctgttgctgcaccgcggggccacgtccgagggcctcttcctacacacaccgccc
gccagctacgaccacgacctgttcagcatgacctggggccccaccatcgccgccctctcc
tacgtcttcgacaagagcctggacgacaccatcatacagaaggccatcgctggcttcagg
aaatgtgcaatgatctcggctcactttggcttcagtgacgtgttcgacaacctcatcatt
tccctctgcaagttcactaccctcagcagcgagtcggtggagaacctgcccacggtgttc
ggtagtaacctgaaggctcaggttgcagccaagacggtgttcagcctggcccatcgccat
ggcgacatcctgcgcgagggctggaagaacatcatggactccatgctgcagctgttcaga
gccgagctgctgcccaagcccatggtggaggtggaggactttgtggagccgaatggaaag
atctctcttcagagggaagagacgccatctcagagaggggagtctgcggtgttgagcttt
gtcaactggttaactctgagtggggcagagcagtctggtctcagagggccgtccaccgag
aaccaggaggccaaacaggccgcactgctctgcattaagcaatgtgacccagagaagttg
atcacagagagcaagttcctccagttggagtctctacaggagcttatgaaggcgttgatc
tcggtgacgcctgatgaagagacgtatgacgaggaggacgctgcgttctgcctggagatg
ctgctgcggatcgtcctggagaaccgggaccgagtgtcgtgtgtgtggcagacggtgagg
gatcacctgtgtcatctgtgtgtccatgccaacgagagctgcttcctggtggagagggcc
gtggtggggctcctcagactggccatccgactactgaggagagaggacatcagctcccag
gtgctgctgtcgctgcgtctgctgctgatgatgaagccgcaggtgctgtggcgtgtgagt
cgagaggtggcctacggcctgcacgagctgctcaagaccaacgcggccaacatccacagc
acggacgactggtacacactcttctccctgctcgagtgcatcggcgccggggtcaagccg
cccgcagccctgcagatgagcgctgggaacaccgaccacgatacaggagcccagtcggac
agtgaggtgagctcccaccaccccagcgaggtgtcggtggaccgcggctacacgtcggac
tcggagctctacaacgagcagcacgccaagagccgcatgccccgctccaccaccgacgtg
gacgtagctaccagcggctggctcgtggtgggtaaggaggatgtggacagcagtaaggtg
tgtgtgggtgtgggcggctccaggccgctgctgtccccgctggtgaaccagtacagcctg
acgctggggcaggacatgggcctgcacgacaccaagtccctcatcaagtgcaccgagtcg
ctctccttcatcgtgcgggacgccgcgcacgtcacacccgagaacttcgagctctgcgtc
aagaccatccgcgtgttcgtggaggccagcctcaacggaggctaccgcacccatgagaag
aagaagagccacaagtacgacaagtcgagtcgtctgcggaagaagcctcgcgagaaggac
gtggcctcccgccgcgccaaggccagccagcggctgtcccgttcccatagcgacgacgag
gaggacgagggcgtgccggccagctaccacacggtgtctttacaggttagtcaggacctg
ctggacctgatgcacacgctgcacacgcgtgctgccagcatctacagctcctgggccgag
gaacagcgccacctagaggctgccggcaggaagatcgaggccgactctcacacactctgg
agcagctgctggtgtcctttgttgcaaggtatggcgtggctgtgtgttgatgcgaggcgg
caggtgcgcatgcaggccctgacctacctccagagggcgctgttggtgcacgacctgcag
acactggacgcagctgagtgggagtcctgctttaacaaggtgctgtttccccttctgacc
aagctgctggataacatcagtcctgctgacgtaggaggcatggaggagacacgcatgagg
gcatgcacactactctcaaaggtgttcctgcagcatctctctcctctgctctctctgccc
acctttgctgctctgtggctcaccatcctggacttcatggacaagtacatgcacgccggc
tccagtgatctactgctggaggcgatccctgagtctctgaagaacatgctgctggtgatg
gatacggccggcatcttcctgagctccgactcccgcaccggatactcggcactctgggaa
atcacctgggagcgcatcgactgcttcctgcctcacctcagagaggagctcttcaagcag
gccgtcatgcccgagcctgtgcccagtgtgcctgttgagcccccccagcctgcggccccc
tcccctccccccactgagcccaaggccccgagccgaccggcctccccccaggacaccaca
gccccacctagtgccaacggtacggaccgatcgtccccagtgcccccccccaccccgcct
ctgcccacccccgtcaagatgtcccctcccccagagtcgcccccgtctctcagccaatca
ccgctcatcctgcagccgctggcctcgcccctacaggtgggcgtgccgcccatgtccctg
ccaatcatcttaaaccccgccctcatcgaggccacctcccccgttccccttctaaccgcc
cagcgacctattgaccccgccgaccccacggaggtcaagtaa
DBGET
integrated database retrieval system
