Sardina pilchardus (sardine): 134063562
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Entry
134063562 CDS
T10667
Name
(RefSeq) girdin-like isoform X1
KO
K25392
girdin
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
spil03037
]
134063562
Cilium and associated proteins [BR:
spil03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
134063562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
GAS
DUF4472
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
134063562
NCBI-ProteinID:
XP_062375121
LinkDB
All DBs
Position
18:4124612..4194393
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AA seq
1896 aa
AA seq
DB search
MDNKVFAPLLEEFMLTPLVAWVKTAGKLSTKDGSKLSEYVELVDGVYLNEIMLEINPKAT
VQRTNKKVNNDSNLRIQNLSILIRQIKTYYQETLQQLVMMPLPNVLVLGRNPLSEQGLEE
MKKMLLLLLGCAVQCEKKEEYIERIQTLDFDTKAAIASHIQEVTHNQENVLDLQWLEGGE
APPEDLDSFSRSVAFHLKRLVDERDDQLETIVELTQERDCGQYSPPTPYAHSPGDSPSMR
RTESRQHLSVELADAKAKIRRIRQELEEKSEQLLDCRQELENMESELKRIQQENLQLLSD
ARSARAYRDELDALREKAVKVDKLESEVGRYKERLHDIEFYKARIEELKEDNQVLLETKS
MLEDQLEGNRARSDKLHELEKENLQLKAKIHDMEMERDMDRKRIEELLEENLTLEMAQKQ
SMDESLHLGWELEQLSKTPDLAEVPQKSLGHEVNELTSSRLLKLEKENQELLKTVEALKG
DEPGERLRKADREVTRLTQRLEQLEVELRVDRESLRSAESLSGDLMKEKAQLEKTLETLR
ENSERQVKGLEQENEHLTQTVSSLRQRSQVGAEARVKDVEKENRVLHESIKETSGKLNKL
EFERKQLRRDAELHREKAERAEELELDARRLERENEALHKRLASLGITCERVEALERDNA
ELEAEARKLKKKLDALRGTAFQLEALEKENAQLDEENLELRRAAESLRSAGAKAAQLEME
NRELENERSQLKRGLELLRASSKKSERLEASCQGLDTENQRLQKALENGSRKIQQLEGEL
QDVEAENQSLQRSLEELKISSKRLEQLEQENKVLEQESAQLERDKKQTEKENKRLRQQAE
IRDSKLDDDNQRISHLEKENRVLNKEVSTLKDSCNRVKDLEKESKEMIKQATIDKKTLVT
LREELVSEKLKTQQMNNDLEKLTHELEKIGLNKERLLHDEQSSDDRYKLLESKLESTLKS
SLEIKEEKIAALEARLQESSNLNQQLRQELKTVKKNYEALRQREEEERMVQSSPSRGGED
SQVVHKWEKESQEATRELLKVKDRLIEVERNNATLQAEKQALRSQLKQLETQSSNLQAQI
LALQRQTASLQENNTTLQTQNAKLQVENSTLNSQSGALMAQTAQLQSQQSSAEGERDGAL
REREELRSIYEQLLRDHEKLAALHERQAAEYEALIGKHGGLKSSHKSLEVQHRDLEDRYN
QLLQQKAQLEELERALKGEQEKMLTENKNHEATAAEYRKLKDEHDRLNHTYQQLVKDNEG
LQSDHKAVKSQLNAARLEQTRLEAEFSKLKEQYQQLDITSTKLTNQCELLSQLKGNLEEE
NRHLLDQIQTLMLQNRTLLEQTMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQYKF
YDPSPPRRRGNWITLKMKKLIKPKSRERMRSLTLTPTRSDSSEGFLSVPLDSQDSSSIGS
GSNSLDDTLTHKRSNRKKIQHTQSQGSSTVTALKRLPFMRNRPKDKDKVKAIYRRSMSMN
DLLQTMAQAGGQWAGSTDNLDDPEESAPGGQRMKELGPMAYSTNAINYATLSLPAGHRSK
QKLKGKDNASYEDVTPTSSEEPSGTRAQGLQLISRAQVSSSLASSSSTMCRVPCSICSST
AVNGSLSRPHSESSGEFSLSLDTEMGSSGSSPVQRSSHQSPLQLRRAPDTATAIAASQAP
SRKAGSGSGSLGSEVVSLQQFLDESVEPVESGSQENLTVDSPRLSGGTERVQKERVIKGR
GILRSSSGRVSSASGGGDGNSVGQSRASGPAGRPTLRKAESTRVKGSAAPRSGLSAQGKA
VSVCERLDSAGGASLSGTGTGLPRASSVISTAEGTTRRTSIHDLLSKDSRQPVSVDPSPK
VTARVTPRPAPAGESNAQVSQERRKSKSRAGEQQSS
NT seq
5691 nt
NT seq
+upstream
nt +downstream
nt
atggataacaaggtctttgctccattgctggaggaattcatgcttactcctttggtcgcc
tgggtgaagacagccggaaaattatctaccaaggatggtagtaaactgtcggaatatgtt
gaattagtggacggtgtatatttgaacgagatcatgctggagataaatcctaaagccacc
gttcagaggaccaacaagaaagtgaacaatgactccaatctgcggatccaaaatctctcc
atcttgattcgtcagattaagacatactaccaggaaactcttcagcagctggtcatgatg
cccctgcccaatgtgctggtactgggcagaaatcctctgagtgaacaaggcctggaggag
atgaagaagatgctcctgctgctgctgggttgtgcggtccagtgtgagaaaaaggaggag
tacatcgagaggatccagactctggactttgacacaaaagcagccatcgcctcacacatt
caggaggtcacccacaaccaggagaacgtgctggacctgcagtggctggagggcggcgag
gctccccccgaggacctggactccttctcccggagcgtggcgttccacctcaagcgtctg
gtggacgagcgcgacgaccagctggagaccattgtggagctgacccaggagagggactgt
gggcagtactcccccccgacgccgtatgcccactctcctggcgactcgcccagcatgcgg
cgcaccgagagccggcagcatctctccgtggagctggccgacgccaaggcaaagatccgc
cgcatccgacaggagcttgaggagaagagtgaacagttgctagactgccgacaggaactg
gagaacatggagtctgagctgaagaggattcagcaggagaacttgcagctgctgtctgac
gcacgctcggccagggcctaccgggacgagctggacgctctgcgagagaaggccgttaaa
gtggacaagctggagagcgaagtcggccgctacaaggagaggctccatgacattgagttc
tacaaggccaggattgaggagctgaaggaggacaaccaggtgctgctggagaccaagagc
atgctggaggaccagttggagggcaaccgagcgcgctcagacaagctgcacgagctggag
aaggagaacctgcagctcaaggccaagatccacgacatggagatggagcgggacatggac
cgcaagcgcatcgaggagctgctggaggagaacctgacactggagatggcgcagaagcag
agcatggacgagtccctgcacctggggtgggagctggagcagctctccaagacgcccgac
ctcgccgaggtacctcagaagtctctgggccacgaggtgaatgagctgacgtcgagccgc
ctgctgaagctggagaaggagaaccaggagctgctgaagaccgtggaggcgctgaaggga
gacgagccgggcgaacgcctccgcaaggccgaccgcgaggtcaccaggctcacgcagagg
ctggagcagctggaggtggagctgcgtgtggacagggagagcctgcggagtgcggagagc
ctgagcggcgacctgatgaaggagaaggcccagctggagaagaccctggagacgctccgg
gagaactcggagagacaggtgaagggtctggagcaggagaacgagcacctgacccagacg
gtgtcgtccttacggcagcgctcgcaggtgggcgcggaggcgcgcgtgaaggacgtggag
aaggagaaccgggtgctgcacgagtccatcaaggagaccagcggcaagctcaacaagctg
gagttcgagcgcaagcagctgcgccgggacgcggagctgcaccgggagaaggccgagcgc
gccgaggagctggagctggacgcccggcggctggagcgcgagaacgaggccctgcacaag
cgtctggcctcgctgggcatcacctgcgagagggtggaggcgctggagcgcgacaacgcc
gagctggaggccgaggcacgcaagctgaagaagaagctggacgcgttaagaggcacggcg
ttccagctggaggcgctggagaaggagaacgcgcagctggacgaggagaacctggagctg
cggcgcgcggcggagagcctccggtcggcgggcgccaaggcggcgcagctggagatggag
aaccgcgagctggagaacgagaggagccagctgaagcgcggcctggagctgctcagggcc
tcgtccaagaagagcgagcggctggaggccagctgccagggcctggacacggagaaccag
cggctccagaaggcgctggagaacggcagccgcaagatccagcagctggagggggagctc
caggacgtggaggcggagaaccagagcctacagcgcagcctggaggagctgaagatctcc
agcaagcgcctggagcagctggagcaggagaacaaggtgctggagcaggagagcgcgcag
ctggagagggacaagaagcagacggagaaggagaacaagaggctgaggcagcaggccgag
atcagggactccaagctggacgacgacaaccagcgcatctcccacctcgagaaggagaac
cgggtcctcaacaaggaagtgagcacgctgaaagactcctgcaacagagtcaaagacctg
gagaaggagagcaaggagatgatcaaacaggccaccattgataagaagaccctggttacg
ttaagagaggaactggtgagtgagaagctgaagacccaacagatgaacaacgatctggag
aagctgactcacgagctggagaagatcggcctcaacaaggagcgccttctgcatgacgag
cagagctctgacgaccggtacaaactgctggagtccaaactggagtcgacgctcaagtcc
tcgctggagatcaaagaggagaagatcgccgccctggaggccagactgcaggagtcctcc
aacctcaatcagcagctgcggcaggagctcaaaacagtgaagaagaactacgaggccctg
cgccagagggaggaggaggagcgcatggtgcagagctcgccctctagaggcggggaggac
tcgcaggtggtgcacaagtgggagaaggagagccaggaggccacgcgggagctgctcaag
gtcaaggatcgcctcatcgaggtcgagaggaacaacgccaccctgcaggcggagaagcag
gcgctgcgctcgcagctcaagcagctggagacccagagcagcaacctgcaggcacagatc
ctggctctgcagcgccagaccgcctctctgcaggagaacaacaccaccctgcagacccag
aacgccaagctgcaggtggagaactcgacgctgaactcccagagcggggcgctgatggcg
cagacggcgcagctgcagagtcagcagtcgagcgcggagggcgagcgggacggggcgctg
cgggagcgcgaggagctgcgctccatctacgagcagctgctgcgcgaccacgagaagctg
gccgcgctgcacgagcgccaggccgccgagtacgaggcgctcatcggcaaacacggcggc
ctcaagagcagccacaagagcctggaggtgcagcaccgcgacctggaggacaggtacaac
cagctgctgcagcagaaggcccagctggaggagctggagagggccctgaagggcgagcag
gagaagatgctgaccgagaacaagaaccacgaggccaccgccgcagagtaccgcaagctg
aaggacgagcatgaccggctcaaccacacgtatcagcagctggtgaaggacaacgagggc
ctgcagtctgaccacaaggccgtgaagagccagctgaatgccgccaggctggagcagacg
cgtctggaggccgagttctccaagctcaaggagcagtatcagcagctggacatcacctcc
accaaactgaccaatcagtgtgagcttctgagccagctgaaggggaacctggaggaggag
aaccggcacctgctagaccagatccagaccctgatgctgcagaaccggacgctgctggaa
cagaccatggagagcaaggacctgttccacgtggagcagcggcaatacattgacaagctg
aacgagctgaggagacagaaggagaagttggaagagaagataatggaccagtacaagttc
tatgacccctctcccccacgcaggcggggcaactggatcacgctgaagatgaagaagctg
atcaagcccaagagccgcgagcgcatgcgctccctgacgctgacgcccacgcgctccgac
tccagcgagggcttcctgtccgtgccgctggacagccaggacagctcgtccatcggctcc
ggctccaactcgctggacgacacgctcacgcacaagaggagcaacaggaagaaaattcag
cacacccaatcgcagggttcctcgactgtgacggctctgaagcgcctgccctttatgagg
aacaggcccaaggacaaagacaaagtgaaggccatctaccgccggtccatgtccatgaac
gacctgcttcagaccatggcgcaggccgggggccagtgggccggcagcaccgacaacctg
gacgacccggaggagtcggcccctggcgggcagcgcatgaaggaactgggccccatggcc
tactccaccaacgccatcaactacgccaccctcagcctgcccgccgggcacaggagcaag
cagaagctcaagggcaaagacaacgcctcctatgaggacgtcacccccacatcctcagag
gagcccagcggaacacgagcgcaaggcctgcagctcattagcagggcccaggtttcgtcc
tccctcgcctcctcctcctccaccatgtgccgagtcccctgtagcatctgtagtagcacg
gcggtcaacggcagcctgagccggccgcacagcgagagcagcggcgagttcagcctgagc
ctggacacggagatgggctccagcggcagcagtcccgtccagcgctcgtcccaccagagc
ccgctgcagctccgcagggcgccggacaccgccacggccatcgcggcctcccaggccccc
agcaggaaggccggctccggctccgggtccctcggcagcgaggtagtctcactgcagcag
ttcctggatgagagtgtagagcccgtggagtcgggcagccaggagaacctgacggtggac
tccccgcggctgtcgggcggcaccgagcgcgtgcagaaggagcgcgtcatcaaggggcgg
ggcatcctgcgctcctccagcggccgagtgtccagcgccagcggcggcggcgacggcaac
agcgtcggtcagtcacgcgccagcggccccgccggccggcccaccctgcgcaaggccgag
agcacgcgggtcaagggctcggccgcgccgcgctccggcctctccgcgcagggcaaggcc
gtgtccgtgtgcgagcggctggactctgcagggggagcgtcgttgtccggtaccgggacc
ggcctgccgcgcgccagcagcgtcatctccacggccgagggcaccacgcgccgcaccagc
atccacgacctgctgtccaaggacagccggcagcccgtctccgtcgacccctcgcccaag
gtgaccgccagggtgaccccgcggcccgcccccgccggcgagtccaatgcgcaagtgtca
caagagcgcagaaagtcaaaaagcagagctggagagcagcaaagctcctaa
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