Sardina pilchardus (sardine): 134063619
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Entry
134063619 CDS
T10667
Symbol
nfkb2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04010
MAPK signaling pathway
spil04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
134063619 (nfkb2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
134063619 (nfkb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spil03000
]
134063619 (nfkb2)
Transcription factors [BR:
spil03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
134063619 (nfkb2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
134063619
NCBI-ProteinID:
XP_062375200
LinkDB
All DBs
Position
18:complement(7366891..7380735)
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AA seq
955 aa
AA seq
DB search
MTNIWTSHLEQLQSKIRADDPVANGMSGGLRMDDSQYGLKMLESELVYSSIEDSSSYIEN
AFMPHLDIKSEPYAIETVDGPYLQIIEEPKQRGFRFRYECEGPSHGGLPGASSERNRRTY
PTVKVCNYVGHARVEVQLVTHTDPPRVHAHSLVGRQCNEANGTCMVDVGPNDLQAQFSNL
GILHVTKRGVMEVLIKRLREERRRQRESTYHFSDADEQAICNEAKDLSKSMDLNIVRLKF
TAYLQDSTGAFTRALKPVISNAIYDSKSPNASNLKISRMDKTCGTVLGGDEIFLLCDKVQ
KDDIDIRFFEEDDEGGWEAYGDFSPTDVHKQYAIVFKTPPYHSAEIERPVTVFIQLKRKK
GGDSSEPKQFTYVPHVPDKEEVQRKRQKSLPHPHFDSWPGPQGGAGGSGRGAGGFGGPGG
GPGSGGMGGGAGFYRYGMDGSGSYGCGGFGGGGVLHMSASSGTPTSAAGASGPSPNPVQQ
QLLQIAAVLQNRATYSAKRTARALLEYCSSGDVRPLLAVQRHLCGVQDENGDTPLHLAVI
HQQPAVVQQLLHSIVNIPQQNIINRLNHLGQSPLHLAVITRQLKVVEVLMRVGADPSLLD
RDGRTVVHLAAHAGDEVTLRLLLSHLGERHAHLVNTADFSGLYPLHLAVRRGGERCLRLL
VESGSKINAQEQKSGCTALHLAVKENLFKVACTLLTELKADVNVCTFGGNSPLHLAASQG
SPPLCSMLIAAGANKSLENDEPLFFSSSSSDEDEEDRRLRPADSRQTEEDIGGQVQAVSS
SLERIQINPRKRPAGGHKPFDLAKCQKVRKILDSMSRPQTSPHTTKRPNQNTEESGSGQP
LDGEMMEKLCGLLDQSRVPWKELAEKLGMLTLAHLYQESPSPCQNLLENYQLAGGAVEGL
VEALQTLGINEGVRLLRQTQVREDKQSTVDTTVDSGFGSQGIEDDDGELPAMATS
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacatctggacttcacacctagaacagttgcagagcaaaataagagccgatgac
cctgttgcaaacggcatgtcgggaggactgagaatggacgattcccagtatggcttgaaa
atgctagagagtgagttggtctacagttccattgaggacagcagcagttacatagaaaat
gccttcatgccacatttagacataaagagtgaaccttatgccattgaaacagttgatgga
ccctatttacaaatcatagaggaaccaaaacagcgaggctttcgcttccgatatgaatgt
gagggaccatcgcatggagggctgcctggagcgtccagtgaaagaaacagaaggacatac
cccaccgtcaaggtgtgtaactacgtgggtcatgctcgagtggaggtgcagctggtgaca
cacactgaccctccgcgtgtccacgctcacagtctggtggggaggcagtgcaacgaggcc
aatgggacctgcatggtggacgtcggacccaatgacctccaggcacagttcagtaatttg
ggtattttgcacgtcaccaaacggggcgtcatggaggtgctgatcaagaggctgagagag
gagaggagaaggcagagggagtcaacctaccatttcagtgatgcagatgagcaggctatt
tgtaacgaggccaaagacctgagcaagtccatggatctcaacattgtgcggctgaagttc
acagcgtacctccaggacagcacaggggcatttaccagagccctgaagcctgtcatttcc
aatgccatatatgacagcaaatcacccaatgcctcaaacttgaagatctcacgtatggat
aagacctgtggcacagtgttgggtggtgatgaaatatttctgctttgtgataaagtacaa
aaagatgacattgacattcgcttctttgaggaagatgacgaagggggttgggaggcctat
ggagacttctctcccacagatgtgcacaaacagtacgccattgtgtttaagactccaccg
taccacagcgcagagattgaaagaccagttacagtgttcatacagctgaagaggaagaaa
ggaggagacagcagtgagcccaaacagttcacctatgtgcctcatgttccagataaagag
gaagtccaacggaaacggcaaaagtcccttcctcacccgcactttgactcatggcctggg
ccccagggtggggcaggcggttcagggagaggagccgggggatttggaggcccaggtgga
ggcccaggttcaggaggcatgggaggtggagcaggcttctaccgctacggcatggacggc
tcgggctcctacgggtgcggagggttcggcggcggcggagtgctgcacatgtccgcttcc
tctgggacgccaacatcggcagcgggagccagcggcccatcacccaatccagtgcagcag
cagctcctccagatcgctgcggtcctgcagaacagagccacgtactcggccaagcgcacg
gcccgcgctctcctggagtactgcagcagcggggacgtgcgccccctactggccgtgcag
agacacctgtgcggggtgcaggacgagaacggagacacgcccctgcacctggctgttatc
caccagcagccggcggtagtgcagcagctgctccactccattgttaacatcccgcaacag
aacatcatcaacagactcaaccacctggggcagtcgccgctgcacctggctgtgattacc
cgccagctgaaggtagtggaggtgctgatgagggtcggggcggacccttcgctcctggac
cgggacggacgtactgttgtccacctggccgcccatgccggggacgaagtcacgctccgc
ctcctgctctcacacctaggcgagaggcacgcccacctggtcaacacagctgacttctca
ggcctctaccctctgcacctggctgtgaggagagggggcgagcgttgcctccgactcctg
gtcgagtcggggtccaagatcaacgctcaggagcagaagagtggctgcaccgccttgcac
ctggccgtcaaggagaacctcttcaaagtggcctgcacgctcctcaccgagctgaaggca
gatgtgaatgtttgtacgtttggcggaaacagtcccctccacctggctgctagtcagggc
tcccctcctctctgttccatgcttatcgctgcaggtgccaacaaaagcctggagaatgac
gagccactcttcttcagttcctcttcctctgacgaggatgaggaggacagacgcctgaga
ccagcagacagcagacagactgaggaggatattggtggacaggtccaagcagtgtcgtcc
tccctggaacgaatccaaataaacccacgcaaaagaccagcagggggacacaaaccattt
gacctggccaaatgtcaaaaggtgagaaagattctcgacagcatgtccaggcctcagact
agtccccacaccaccaagagacccaaccaaaacacagaggaaagcgggagcggtcagccg
ctagatggggagatgatggagaagctgtgcggtctcctcgaccagagccgggtgccctgg
aaggagctggcggagaaactgggcatgctcaccttggcccacctgtaccaggagagtcca
tcaccgtgtcagaaccttctagagaattaccagctggctggaggtgcagttgagggattg
gtggaggccctgcagactttgggtataaatgagggggtgagactactgagacagacacag
gtccgagaagataaacagagcacagtggacacaacggtggacagcggctttggcagtcag
gggattgaggacgatgatggcgagcttcccgctatggcaacttcttaa
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