Sardina pilchardus (sardine): 134063727
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Entry
134063727 CDS
T10667
Name
(RefSeq) toll-like receptor 4
KO
K10160
toll-like receptor 4
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04145
Phagosome
spil04217
Necroptosis
spil04620
Toll-like receptor signaling pathway
spil04621
NOD-like receptor signaling pathway
spil05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
134063727
09143 Cell growth and death
04217 Necroptosis
134063727
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
134063727
04621 NOD-like receptor signaling pathway
134063727
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
134063727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134063727
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
spil04054
]
134063727
04090 CD molecules [BR:
spil04090
]
134063727
00536 Glycosaminoglycan binding proteins [BR:
spil00536
]
134063727
Membrane trafficking [BR:
spil04131
]
Endocytosis
Phagocytosis
Toll-like receptors
134063727
Pattern recognition receptors [BR:
spil04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
134063727
CD molecules [BR:
spil04090
]
Proteins
134063727
Glycosaminoglycan binding proteins [BR:
spil00536
]
Hyaluronan
Cell surface receptors
134063727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
LRR_4
TIR_2
LRR_EndoS
ThsB_TIR
Motif
Other DBs
NCBI-GeneID:
134063727
NCBI-ProteinID:
XP_062375398
LinkDB
All DBs
Position
18:complement(25722453..25725346)
Genome browser
AA seq
809 aa
AA seq
DB search
MIFTTARAVKMNEDMEACLEVIPSLQYSCCKRNLSYIPTSIPPSTQHLDFSFNYLTTLQR
QMFLRLPLLQHLDLTRCHIQHIDNEAFFNVRNLSVLILTGNPLKYFGRNSINVLVKIYKL
VLVDIRLLSLDSLNLQNLTSLKELKVGTNRLFSLALPMYADRFKDFTLLDLRKNNISVIR
AVHTSVLRQMSSNLTLILAGNPISFIETGACNGLYLQEINLFDTTLFRSREVLGGLRGLN
VKRLKIGHFIETGRIGINPDSLENLCFINFEEIYFYHSTYFKLPNHILGCMSNSTKIVLT
KVGIINREHVYFPNLEEIVVVKGKMAILPDVLLSHQHNLKKLVINYNLLPPKFTSFADLP
SLDYIDLSHNELIMNCCDNEFIGSPKLRYLNLSENAKIRIRDHGFFNQTSLEILDLHGTE
VELEHDLAVMQNLKNLKTLNLSHSQIIFKSIVMFYGLSSLKELKIAGNSFAKGIFGQLFS
NLTALELLDISNCAIEDIPLTSFQDLHNLKHLILSGNKLTTMDFLTGPSLLKLKYLHTEN
NHIASISPNILQKLPANLSVFDLSFNPINCSCSQTEFISWIINHQSILKDPQLISCKSSS
MNSSVINFDTTHCVPTNNGIITVSILAAVLVFFSALLYKYQFYIHYCFILLRGYRMSRQE
EFTYDAFVIYSSKDETWVLEELVENLEKGLPPIQLCLHERDFQAGKSITSNIVDEGIMGS
RKVIVVVSQHFLDSSWCQFEFELAQSWLVLRQNASIIIIILEDVEDKKIRRLFGLHKYLK
KNTYLKWKGNVLSNVRFWTRLRKAIIARN
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgatttttactactgcacgggcagtcaaaatgaatgaagatatggaggcatgcttggag
gtcatccccagtctccaatattcatgctgcaagagaaacctgagctacataccaaccagt
atccctccctccacacaacatttggacttcagttttaattacctcacaacattgcagaga
caaatgttcctgagattaccacttctacaacatcttgatctcacaagatgtcacatccaa
cacattgacaatgaggccttctttaatgtaaggaatttgtctgttttgatcctcactgga
aatccgcttaaatattttggaagaaacagcattaatgttttggtaaaaatatacaagctt
gttcttgtagacatacgtctgctctccttggacagtcttaatttgcagaatttaacaagc
ctaaaggaattaaaagttggaacaaacaggttattttctttggcccttccaatgtatgct
gatcgtttcaaggacttcacattattggaccttcgtaaaaacaatatatctgtcatcaga
gctgttcacacttctgttttgcgtcagatgagtagcaatttaactttaatattggccgga
aacccaatatccttcatagaaactggagcatgtaatggcctttatttgcaagagatcaat
ttatttgacacaaccttattcagaagtagagaagttcttgggggtcttagaggtttgaat
gtgaagaggttgaaaataggacattttattgagacaggaaggatcggaataaatccagat
tctttggaaaacctttgtttcataaacttcgaggagatatatttttatcactccacctat
ttcaaactacccaatcacatccttggttgcatgagtaattctacaaaaattgttctgacc
aaagttggaataattaacagggagcatgtgtattttccaaaccttgaagagattgttgtt
gttaaaggcaaaatggccatactaccagatgttctactatctcatcaacacaatttaaag
aaactggtcatcaattacaatctcctgccaccaaaatttacaagctttgctgatttacct
agtctagactacattgatctaagtcataatgagttgatcatgaattgctgtgataatgaa
tttattggcagccctaaactcaggtatctaaatctgagtgagaatgcgaagattagaata
agagaccatggattttttaatcaaacgtctcttgaaatattggatcttcatggcacagaa
gtagagcttgaacatgacttggctgttatgcaaaaccttaagaatttaaaaactctcaac
ctttcccactcacaaattatcttcaaaagcatagtaatgttttatggtttgagcagtctg
aaagaattgaaaattgctggtaacagctttgcgaaaggcatttttggccaattattttca
aatctcacagctttggagcttctggacatttcaaattgtgccattgaagacatacccttg
acttcattccaggatttgcataatttaaaacatttgattcttagtgggaacaaactgacc
acaatggactttctcacaggtcctagtttattgaaactaaagtatttgcatacagaaaat
aaccacatagccagcatctctccaaacattcttcagaaacttccagcaaatctttcagta
tttgatttgtccttcaatcccatcaactgttcctgctctcaaactgaatttatttcctgg
atcattaaccatcagtcaattctaaaagatcctcaactaatatcatgcaaatcctcatcc
atgaactccagcgtgataaactttgacaccacacactgtgttcccacaaacaatgggatc
ataactgtttccatattagcagctgtacttgtattcttctctgcattgctgtataagtac
cagttctatatacactactgcttcatattgctaagaggctacagaatgtctagacaagaa
gaattcacctacgatgcctttgtgatctactcaagcaaggatgaaacctgggtgttggaa
gagcttgtggaaaaccttgagaaaggccttcccccaattcagctttgcctgcatgagcga
gatttccaagctggaaagtcgattacctccaatatagtggatgaaggcattatgggcagc
cgaaaagtcattgtggtggtgtctcagcacttcctagacagctcctggtgccagtttgag
tttgaactggcacaatcctggcttgtgttgaggcaaaatgccagcatcatcatcatcatt
ctggaagatgtggaagataagaaaataaggagactgtttggacttcataagtatctgaaa
aagaacacatacctcaagtggaaggggaatgtgctaagcaatgtacggttctggactcgt
ctcagaaaagccattattgctagaaactga
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integrated database retrieval system