Sardina pilchardus (sardine): 134063861
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Entry
134063861 CDS
T10667
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
134063861 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spil03021
]
134063861 (polr1b)
Enzymes [BR:
spil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
134063861 (polr1b)
Transcription machinery [BR:
spil03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
134063861 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
134063861
NCBI-ProteinID:
XP_062375588
LinkDB
All DBs
Position
18:21821711..21831200
Genome browser
AA seq
1134 aa
AA seq
DB search
MDYSTKWSNLPSAPSLKNLTEPGFGVPKEQQHAAVQDLTKAHIESFDHAVTDGLCRAVQA
IPPLEFTYKNDRIALAFVDVSIQSPMANKGSICKDMRVFPAECRGRRCTYRSRIVCDVSW
SVNGIPKGIIKQTLGLVPIMVKSKLCNLHGLSPGELIEHHEEGEEMGGYFIVNGIEKVIR
MLIMPRRNYPIAMSRPKWKSRGQGYSQYGISMHCVKEEHTAINMNLHYLDNGTVMLNFIF
QKELFFIPLGFALKALVDFSDFQIYQEMIKGLEDNSFYKSCVSQMLRVVMEQGCTTKEKV
LRYLGERFRVKMSLPDWYSHEQCAHYLLDECLCIHLKSDVEKFYQLCLMTRKLFVFAKEG
CMEENPDSLMCQEVITPGQLYLMFLKEKLAAWLVSVKYSLDKRGHRLPADLSSDILMKVF
NMSSDLTKPFEYLLATGNLHSKTGLGMLQNTGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTSVRRLLPESWGFVCPVHTPDGEPCGLMNHMTAHCEVVAPALSTTTIPALLCSLGVT
PVDVTPSQPYSDCYPVLLDGALVGWVEKELAPGLAESLRRFKVLKEKRVPPWTEIVLIPQ
TGKASLYPGLFLFTTPCRMVRPVRNLALGKQELIGTFEQLFINVGIFGDEIEEGVTTHQE
LFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSFKERSDNKLYRLQTPQSP
LVRPVMYDHYNMDNYPIGTNAIVAVISYTGYDMEDAMIVSKSSWERGFAYGYVYKTELVD
LTEKVKGEDGVVFGVQPGDPKVMNHLDADGLPAIGTTLHYGDPFYSYINLNTGKGVITYY
KSQESCVVDNIKVCSNDQGTGRFKRVCITVRVPRNPTIGDKFASRHGQKGILSRLWPAED
MPFSESGMTPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFSFSEEHQALGY
FGDSLRAAGYNHYGTERLYSGISGLELEADIFVGVVYYQRLRHMVSDKFQVRTTGARDRV
TNQPVGGRNVQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCMDCGSLLSPLL
EKPPPSWSATRQRRTVCTLCGKSDAIDTVAVPYVFRYFVAELAAMNIKIKLDVK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggattactctactaagtggagtaatttaccctctgctcctagtttaaaaaatcttacg
gaaccggggtttggcgtccccaaagaacaacaacatgctgcagtacaggatctcacaaaa
gcgcatatagagtcgtttgatcacgcggtcaccgatggactgtgccgggctgtacaggcc
atcccaccattggagtttacatacaagaatgacaggattgctttggccttcgttgatgta
tctatacagagtccaatggccaataaaggcagtatctgcaaagacatgcgagtgttccca
gcagagtgccgaggcaggcgctgcacctaccgctcaaggattgtgtgtgatgttagctgg
tcggtaaacggcatcccaaaaggcatcatcaagcaaactctgggcctggtccctatcatg
gtcaagtctaaactgtgcaatctgcatggcctttcaccaggagaactcattgagcaccat
gaagagggagaggagatgggcggttatttcattgtgaatggcatcgagaaggtaatccgt
atgcttatcatgccaaggaggaactacccaattgccatgtcacgccccaagtggaagagt
cgaggccaggggtacagccagtacggtatttccatgcactgtgtgaaagaagagcataca
gccatcaacatgaacttgcattatctggacaatggcaccgtgatgctcaacttcatcttt
cagaaggagctcttcttcattccccttggatttgcactgaaggcactggtggacttctcc
gacttccagatctatcaggagatgatcaaaggcctggaggacaactctttctacaagagc
tgtgtctcccagatgctgcgtgtggtcatggagcagggctgcaccaccaaggagaaggtg
ctccgctacctgggcgaacgcttccgggtcaagatgagcctgcccgattggtacagccat
gagcagtgtgcccactacttactcgatgagtgtctgtgcatccacctgaagtcggacgtg
gagaaattctaccagctgtgcctgatgacccggaaattgtttgtctttgccaaggaagga
tgtatggaggagaaccccgacagtctgatgtgtcaggaagtcatcaccccgggccagctc
tacctcatgttcctcaaggagaagctggctgcctggctggtctcagtgaagtactccttg
gacaagagaggccacaggctaccagctgacctctcgtctgatatcctgatgaaggtgttc
aacatgagctcagatctcaccaagccctttgagtatcttctagccacaggcaacctccac
tcaaagacaggcctggggatgctccagaacacaggcctgtgtgtggtggccgacaagctc
aactttatccgctacctctcgcacttccgctgcgtgcacagaggcgccgccttcgccaag
atgaggaccacgtcggtgcgtcggctgctgcccgagtcgtggggattcgtgtgccctgtg
cacacgcccgacggcgagccctgcggcctgatgaaccacatgaccgcccactgcgaggtc
gtggcccctgccctctctaccaccaccatccctgccctgctctgctctctgggagtgacc
ccagtagacgtcaccccaagtcagccgtattcggactgctaccctgtgctactggacgga
gctctggtgggctgggtggagaaggagctggctccgggcttggcagagtccctccgcagg
ttcaaggtgctgaaggagaagagagttcctccctggacggagatcgtcctgattccgcag
acgggcaaggccagcttgtaccccggcctcttcctcttcaccactccctgccgcatggtg
cggcctgtgcgcaacctggccctgggcaagcaggagctcattggcacctttgagcagctc
ttcatcaatgtgggcatatttggggatgagattgaggaaggggtcaccacacaccaagag
ctgtttccacacagcatgctgagcgtggtggccaacttcatcccttactcggaccacaac
cagagtcctaggaacatgtaccagtgtcagatgggtaaacagaccatgggtttccctctt
cattcatttaaggaacgttcggacaacaaactataccgtctgcaaaccccacagagtcct
ctagtgcggccagtcatgtatgatcactacaatatggacaactatcccatcggcaccaac
gccatcgtggcagtgatctcctacacgggttacgacatggaggacgctatgattgtgagc
aagtcatcttgggagcgaggctttgcctacggctatgtgtacaagacggagttggtggac
ctgacggagaaggtgaagggcgaggatggggtggtgtttggggttcagccgggagacccc
aaagtcatgaaccacctggacgctgatgggctaccagccatcggcaccacgttgcactat
ggagaccccttctacagttacatcaacctcaacactggcaagggtgttattacctactac
aagagtcaggaaagctgtgtggtggacaacatcaaagtgtgcagcaacgaccagggcacg
ggccgcttcaagcgcgtgtgcatcacggtgcgcgtgccacgcaaccccaccatcggcgac
aagttcgccagccgccacggccagaagggcatcctgagccgcctgtggccggccgaggac
atgcccttcagcgagagcggcatgacgcccgacatcctgttcaacccgcacggcttcccc
tcgcgcatgaccatcggcatgctcatcgagagcatggcgggcaagtcggcggcgctgcac
ggcctctgccacgacgccacgcccttcagcttctccgaggagcaccaggcgctgggctac
ttcggcgactcgctgcgcgccgccggctacaaccactacggcacggagcgcctctacagc
ggcatcagcggcctggagctggaggccgacatcttcgtgggcgtggtgtactaccagcgc
ctgcgtcacatggtctcggacaagttccaggtgcggaccacgggcgcgcgggaccgggtc
accaaccagccggtgggcggcaggaacgtgcagggcggcatccgcttcggcgagatggag
cgcgacgcgctgctggcccacggctcgtccttcctgctgcacgaccgcctcttcaactgc
tcggaccgctcggtggcgcaggtgtgcatggactgcggcagcctgctgtcgccgctgctg
gagaagccgccgccgtcctggtcggccacgagacagcgccggaccgtgtgcacgctgtgc
ggcaaaagcgacgccatcgacacggtggcggtgccgtacgtcttccgctactttgtggcc
gagttggccgccatgaacatcaaaatcaagctcgatgtgaagtaa
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