Sardina pilchardus (sardine): 134064031
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Entry
134064031 CDS
T10667
Name
(RefSeq) toll-like receptor 4
KO
K10160
toll-like receptor 4
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04145
Phagosome
spil04217
Necroptosis
spil04620
Toll-like receptor signaling pathway
spil04621
NOD-like receptor signaling pathway
spil05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
134064031
09143 Cell growth and death
04217 Necroptosis
134064031
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
134064031
04621 NOD-like receptor signaling pathway
134064031
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
134064031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134064031
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
spil04054
]
134064031
04090 CD molecules [BR:
spil04090
]
134064031
00536 Glycosaminoglycan binding proteins [BR:
spil00536
]
134064031
Membrane trafficking [BR:
spil04131
]
Endocytosis
Phagocytosis
Toll-like receptors
134064031
Pattern recognition receptors [BR:
spil04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
134064031
CD molecules [BR:
spil04090
]
Proteins
134064031
Glycosaminoglycan binding proteins [BR:
spil00536
]
Hyaluronan
Cell surface receptors
134064031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
LRR_4
TIR_2
LRR_1
LRR_5
LRR_14
LRR_EndoS
LRR_9
LRR_Zer-1
LRR_NXF1-5
LRR_R13L1-DRL21
ThsB_TIR
LRR_LRWD1
SP_C-Propep
Motif
Other DBs
NCBI-GeneID:
134064031
NCBI-ProteinID:
XP_062375790
LinkDB
All DBs
Position
18:25699863..25702989
Genome browser
AA seq
837 aa
AA seq
DB search
MKTFMKLVSFSIMTSLRGHRITFPVMWIIFTTAWAVKMNEDMEACLEVIPSLQYSCFKRN
LSYIPTTIPPSTQHLDFSFNDLTTLQRDTFPRLPLLRHLDLTRCHIQHIDNEAFFNVRNL
SVLILTGNPVKYFGRSSINVLEKIYKLVLADIGLFFLDRFNLRNLTNLKELKIGTNRLFS
LALPTYAENFKDFTLLDLHTNNISVIRTVHTSVLRQMSSNLTLILSGNPISFIETGAFNG
LYLREINLLNTISSTTTREALGGLSGLNVKKLKMGYFTEAGRIQMNPDYLDSICFINFQE
IDFHHSTYFKLPSHILLCMSNSSKIVLTNVGIINREHVYFPNLEEIVVVKGKMAILPDVL
LSHQHNLKKLVINYNHQTTEFKSFDDLPSLDYIDLSHNELIMNCCDIEFSGIPKLRYLNL
SENARVKIRGLGLLNYPSLEILDLHGTEVEIEHDVAVMQNLKNLKTLDLSHSQIIFKSIV
IFYGLSSLKELKMADNSFAKGIFGQLFSSLTALELLDISNCAIEDIPPTSFEDLHNLKNL
ILSGNKLTTMDFLTGLSLSKLKSLHTDNNHIASISPNVLQNIPVDILVFDLSFNPIECSC
SQTEFISWIINHQSVLKDPHLISCKSSSLNSRVINFDPTHCVHKKRVIIIVSLFAVVIVF
LLAALLYKYQFYIHYCFILLRGYRMSRQQECSYDAFVIYSSKDETWVLNELVENLENRPP
PIQLCLHERDFQAGKSITSNIVDEGIMGSRKTIVVVSQHFLDSSWCQFEFELAQSWLVLR
RNAGIIIIILEDVEGNNTRRLFGLHKYLRKNTYLKWKGNVVSNVRFWARLRKAILRN
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgaagacttttatgaagttggtcagtttttctataatgacatctctccgaggacacaga
attacatttccagtcatgtggatcatttttactactgcatgggcagtcaaaatgaatgag
gatatggaggcatgcttggaggtcatccccagtctccaatactcatgcttcaagagaaac
ctgagctacataccaaccactatccctccctccacacaacatttggactttagttttaat
gacctcacaacattacagagagacacgttcccgagattaccattactacgacatcttgat
ctaacaagatgtcacatccaacacattgacaatgaggccttttttaatgtaaggaatttg
tctgttttgattctcactggaaatccagtgaaatattttggaagaagcagcattaatgtt
ttggaaaaaatatacaagcttgttctagcagacatcggtctgttttttttggatagattt
aatttacgtaatttaacaaacctaaaggaattaaaaattggaacaaacagattattttct
ttggcccttccaacctatgctgaaaatttcaaggacttcacattattggacctgcataca
aacaatatatctgtcatcagaactgttcacacttctgttttgcgtcagatgagtagcaat
ttaactttaatattgtccggaaacccaatatccttcatagaaactggggcatttaatggc
ctttatctgcgagagatcaatctactaaacacaatctcgtccacaactacaagagaggct
cttggaggtcttagtggtttaaatgtgaagaagttgaaaatggggtattttactgaagct
ggaagaatccaaatgaatccagattatttggacagtatttgtttcataaacttccaagag
atagattttcatcactccacctatttcaaactgcccagtcacatccttctttgcatgagt
aattcttcaaaaattgttctgacaaatgttggaataattaacagggagcatgtgtatttt
ccaaaccttgaagagattgttgttgttaaaggcaaaatggccatactaccagatgttcta
ctatctcatcaacacaatttaaagaaactggtcatcaattacaatcaccagacaacagaa
tttaaaagctttgatgatttgcctagtctagactacattgatctaagtcataatgagttg
atcatgaattgctgtgacattgaatttagtggcatccctaaacttaggtatctaaatctg
agtgagaatgcaagggttaaaattaggggccttggacttttaaattatccatctctagaa
atattggatcttcatggcacagaagtagagattgaacatgacgtggctgttatgcaaaac
cttaagaatttaaaaactcttgacctttcccactcacaaattatctttaaaagcatagtt
atcttttatggtttgagcagtctgaaagaattgaaaatggctgacaacagctttgcaaaa
ggcattttcggccaattattttcaagtctgacagctttggagctcctggacatttcaaat
tgtgccattgaagacatacccccgacttcatttgaggatctacataatttaaaaaatttg
attcttagtgggaacaaactgaccacaatggactttctgacaggtcttagtttatcaaaa
ctaaagtcattgcatacagataacaatcacatagccagcatctctccaaacgtccttcaa
aatatccctgtggatatattggtatttgatttgtcctttaatcccatagaatgttcctgt
tctcaaactgaatttatttcctggattattaatcatcagtcagttctaaaagatcctcat
ctgatatcatgcaaatcctcatctttgaactccagggtgattaactttgatcccacacac
tgtgttcacaaaaagagagtgataataattgtatctttatttgcagttgtaattgtattc
ctattggctgcattgctgtataagtatcagttctatatccattactgcttcatattgcta
agaggctacagaatgtctagacaacaagaatgttcctatgatgcctttgtgatctactca
agcaaggatgaaacctgggtgttgaatgagcttgtggaaaaccttgagaacagacctcct
ccgattcagctttgcctgcatgagcgagattttcaagcaggcaagtcgatcacctccaat
atagtggatgaaggcattatgggcagccggaaaaccatcgtggtggtgtctcagcacttc
ctagacagctcctggtgccagtttgagtttgaactggcacaatcctggcttgtgttgagg
cgaaatgccggcatcatcattatcattctggaagatgtggaaggtaacaacacaaggaga
ctgtttggacttcataagtatctaagaaaaaacacgtacctcaagtggaaggggaatgtt
gtaagcaatgtgcgattctgggctcgtctcagaaaagccattcttaggaactga
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