Sardina pilchardus (sardine): 134064167
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Entry
134064167 CDS
T10667
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 1-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04517
IgSF CAM signaling
spil04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
134064167
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134064167
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
spil04812
]
134064167
Cytoskeleton proteins [BR:
spil04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
134064167
Intermediate filaments
Intermediate filament-binding proteins
134064167
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
DUF7854
PH_11
Motif
Other DBs
NCBI-GeneID:
134064167
NCBI-ProteinID:
XP_062375974
LinkDB
All DBs
Position
18:complement(4333678..4403099)
Genome browser
AA seq
2379 aa
AA seq
DB search
MELQRATSMPGPLSPGPLSPGHVSPGPLSPGPLSPGLGPSSPGPGPSGTSPTSSSAAAGL
SYSAQAAYNYNQLEGRFKQLQDEREAVQKKTFTKWVNSHLSRMSCRITDLYMDLRDGRML
IKLLEVLSGERLPKPTKGRMRIHCLENVDKALQFLKEQKVHLENMGSHDIVDGNHRLTLG
LIWTIILRFQIQDISVETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFSTSWRDGMAF
NALIHKHRPDLIDFDKLKKSNAHHNLQNAFNLAEQHLGLTKLLDPEDISVDHPDEKSIIT
YVVTYYHYFSKMKALKVEGKRIGKVLDNAIETEKMIEKYESLASDLLEWIEQTIIILNNR
KFANSLVGVQQQLQAFNTYRTIEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYMPREGKL
ISDINKAWERLEKAEHERELALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQD
NFGFDLQAVEAATKKHEAIETDIGAYEERVQAVLSVATELEKESYHDIKRVTARKDNVLR
LWEYLLELLRARRLRLEQNLGLQRVFQEMLYIMDWMDEMKMLLLSQDYGKHLLGVEDLMQ
KHALVEADIGIQADRVKAVNATAQKFIIDMEGYKPCDPQVIRDRVAHMEFCYQELNQLAA
ERRARLEESRRLWKFFWEMAEEEGWVREKEQILSSDDCGKDLTAVVRLLSKHKALEDEMS
GRAAHMQQTVKQGQELVAAGHFGADKIGERIGDVQEQWAALERLAAARKNRLQEAYGMHQ
FQADADDMDAWMLDVLRIVSSADVGHDEFSAQALVKXHKDVAEEIASYRPVLEALHEQAK
ALPPEHADSDEVKGRLAGIEERYGEVAELTRLRKQALQDALALYRMFSEVDACQVWIDDK
ELWLNSMEIPERLEDLEVIQHRFESLEPEMNNQASRVAVVNQIARQLIHSGHPSEKEIKA
QQDKLNTRWSQFRDLVDQKKDSLNSALGVQNYHLECNETKSWIREKTKVIESTQDLGNDL
AGVMALQRKLTGMERDLAAIEDKLGDLGKEAERLSAEHPEQAPGIKGRLGEINEVWDEMK
GTLRAREESLGEASKLQGFLRDLDDFQAWLSRTQTAVASEDMPNTLAEAEKLLAQHEGIK
NEIRNYEEDYQKMRAMGEMVTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQKLLSQS
HAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTILEAAEGAIKKQEDFMTTMDANEEKINGV
VETGRRLVSDGNTSADRIQEKVDSIDQRHKKNREAASALLAKLKDNTELQRFLQDCQELS
LWISEKMLTAQDMSYDEARNLHSKWLKHQAFMAELQSNKEWLDKIEKDGMALVAEKPETE
PVVKEKLGTLKRQWSELESTTQAKAQCLFDANKAELFTQSCADLDKWLVGLEGQIQSDDY
GKDLTSVNILLKKQQMLESQVEVRQKEVEELRSQAQALRQEGQKDSDEVDGRRRGVESKF
QGLLDPLRQRKSSLMASREIHQFNRDVEDEILWVEERMPLATSTDHGHNLQTVQLLIKKN
QTLQKEVQGHQPRYDDIFERSKSIVKADSPNGDVIRQRLADLRGLWAQIIEETGKRHGRL
EEAHRAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEQSSVAMLKKHQIVEQAVEDYAETV
HQLSQTSRNLVAAGHPESERISMRQSQVDKLYAGLKDLSEERRGKLDERSRLFQLNREVD
DLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDAVNQMADELINS
GHADAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEVLGRILDKHKKL
PEELGRDQNTVETLQRMHTTFEHDIQALGTQVKQLQEDAVRLQSAYAGDKAEDIARREGE
VLEAWRSLLEASEGRRVRLLDTSDKFRFFSMVRDLMLWMEDVIRLIDAQEKPRDVSSVEL
LMNNHQGIKAEIDARNDSFTTCIEMGKALLARKHYSSEEIKEKLLQLTDKRKEMIDKWED
RWEWLRLVLEVHQFSRDAGVAEAWLYGQEPYLSSREMGQSVDDVEKLIKRHEAFEKSAAT
WEERFAALERLTTMELLEVRRLQEEEERKRQPPPVEAQPAEAAEAEAAAAAASPQQKEGE
AAASQNGLSTEPDSPREAAGGSDVVNGVVEPSPGPSPTASRKAKPSQAATLPAKPQETAT
QMEGFLHRKHEWEGHNKKASNRSWHNVYCVVNHQEMGFYKDSRSAGQGVPYHSEMPVRLR
DATCEVAVDYKKKKHVFKLKICDGNEYLFHAKDDEEMNSWIQAISSATPSDRSEVAPSSH
STPASSRAHTLPATATAESSPGKREKDKEKRFSLFSKKK
NT seq
7140 nt
NT seq
+upstream
nt +downstream
nt
atggagctccagagggccaccagcatgcctggacccctgtcccccgggcctctgtccccc
ggacacgtctccccgggccctctctcgcccgggcccctctctcccgggctcggcccgtcc
tcgcccggcccgggccccagcggtaccagccccacctcgagctctgccgccgccggtctc
agctactccgctcaggctgcctacaactacaaccagctggagggccgcttcaaacagctg
caagatgagcgcgaggcggtgcagaagaagaccttcaccaagtgggtcaactcccacctg
tcgcgcatgtcctgccgcatcactgacctctacatggacctgagggacggacgcatgctc
atcaagctgctggaggtgctctccggagagagactgccgaagcccaccaaagggcgcatg
cgcatccactgcttggagaacgtggacaaggcgctgcagttccttaaggaacagaaggtt
cacctggagaacatgggctcccatgacatcgtcgacggcaaccacagactcacgctcggc
ctcatctggaccatcatcctccgcttccagatccaggacatcagtgtggagacggaggac
aataaggagaagaagtcggccaaggacgccctgctgctgtggtgccagatgaagacggca
ggatatcccaatgtcaacatccacaatttcagcaccagctggagagatggcatggccttc
aacgccctcatccacaaacacaggcccgacctgattgactttgacaaactgaaaaagtcc
aacgctcatcacaatctgcagaatgccttcaacttggctgagcagcacctgggcctgacc
aagctgctggacccagaggacatcagcgtggaccaccctgacgagaagtccatcatcacc
tacgtggtcacctactaccactacttctccaagatgaaggccctgaaggtggagggcaag
cgcatcggaaaggtgctggacaatgctatcgagacggagaagatgattgagaagtacgag
tcgctggcctccgacctgctggagtggatcgagcagacgatcattattctcaacaatcgc
aagtttgccaactccctggtgggggtccagcagcagctgcaggccttcaacacctaccgc
accatcgagaagcctcccaagtttacagagaaaggcaacctggaggtgcttctcttcaca
attcagagcaagatgcgagccaacaatcagaaggtgtacatgccgcgcgagggcaagctc
atatcagacatcaacaaggcctgggaacgtctggagaaggcggagcatgagcgggagctg
gcactgaggacggagctgattcgccaggagaagctggagcaactcgcacgccgcttcgac
cgcaaggccgccatgagagagacctggctcagcgagaaccagcgccttgtctcacaggac
aactttggcttcgacctgcaggcggtggaggcggccactaagaaacacgaggccatcgag
acggacatcggggcgtacgaggagcgcgtgcaggccgtgctgtcggtggccacggagctg
gagaaggagagctaccacgacatcaagcgcgtcacggcgcgcaaggacaacgtgctgcgc
ctctgggagtacctgctggagctgctccgcgcccgccgcctccgcctggagcagaacctc
ggcctgcagagggtcttccaggagatgctctacatcatggactggatggacgagatgaag
atgctgctgctgtcccaggactatgggaagcacctgctgggggtggaggacctgatgcag
aagcacgcgctggtggaggctgatatcggcatccaggccgaccgcgtcaaggccgtcaac
gccaccgcacagaagttcatcatcgacatggagggctacaagccgtgcgacccgcaggtg
atccgcgaccgcgtggcccacatggagttctgctaccaggagctcaaccagctggcggcc
gagcggcgagcgcgcctggaggagtcgcggcgcctctggaagttcttctgggagatggcg
gaggaggagggctgggtgcgcgagaaggagcagatcctgtcgtcggacgactgcggcaag
gacctgacggcggtggtgcggctgctgagcaagcacaaggccctggaggacgagatgagc
ggccgcgccgcgcacatgcagcagacggtcaagcagggccaggagctggtcgccgccgga
cacttcggcgcggacaagatcggcgagcgcatcggcgacgtccaggagcagtgggcggcg
ctggagcggctggccgcggcccgcaagaaccggctgcaggaggcctacggcatgcaccag
ttccaggcggacgccgacgacatggacgcctggatgctggacgtgctgcgcatcgtgtcc
agcgccgacgtgggccacgacgagttctccgcgcaggcgctggtcaagnagcacaaggac
gtggccgaggagatcgccagctaccggcccgtgctggaggcgctgcacgagcaggccaag
gcgctgccgcccgagcacgccgactcggacgaggtcaagggtcgcctggcgggcatcgag
gagcgctacggcgaggtggccgagctgaccaggctgcgcaagcaggcgctgcaggacgcg
ctggccctctacaggatgttcagcgaggtggacgcctgccaggtgtggatcgacgacaag
gagctctggctcaacagcatggagatccccgagaggctggaggacctggaggtgatacag
cacaggttcgagagcctagaaccagagatgaacaaccaggcctcccgtgtggcggtggtc
aaccagatcgccagacagctcatccacagtggtcacccgagtgagaaggagatcaaagcc
cagcaggacaaactcaacaccaggtggagccagttccgagacctggtggaccagaagaag
gactcgctcaactcggcgctgggcgtgcagaactaccacctggagtgcaacgagaccaag
tcgtggatccgcgagaagaccaaggtcatcgagtccacgcaggacctgggcaacgacctg
gcgggcgtgatggcgctgcagcgcaagctgacgggcatggagcgcgacctggccgccatc
gaggacaagctgggcgacctgggcaaggaggccgagcggctgtccgccgagcaccccgag
caggcgccgggcatcaaggggcgcctgggcgagatcaacgaggtgtgggacgagatgaag
ggcacgctccgcgcccgcgaggagtcgctcggcgaggcgtccaagctgcagggcttcctg
cgcgacctggacgacttccaggcgtggctgtcgcgcacgcagacggccgtcgcgtccgag
gacatgcccaacacgctggccgaggccgagaagctgctggcgcagcacgagggcatcaag
aacgagatccgcaactacgaggaggactaccagaagatgcgcgccatgggcgagatggtg
acgcagggccagacggacgcccagtacatgttcctgcgccagcggctgcaggcgctcgac
accggctggaacgagctgcacaagatgtgggagaaccggcagaagctgctgtcccagtcg
cacgcctaccagctcttcctcagggacaccaagcaagccgaggccttcctcaacaaccag
gagtacgtgttggcccatacggagatgcccaccatattggaggcggcggagggagccatc
aagaagcaggaggacttcatgaccaccatggacgccaacgaggagaagatcaacggcgtg
gtggagacgggccggcggctggtgagcgacggcaacaccagcgccgaccgcatccaagag
aaggtggactccatcgaccagaggcacaagaagaaccgcgaggctgccagtgcactcctg
gccaaactgaaggacaacacagagctgcagagattcctgcaggactgccaggagctgtcc
ctgtggatcagtgagaagatgctcacggcacaggacatgtcgtacgatgaggcccgcaac
ctgcacagcaagtggctcaagcaccaggccttcatggcagagctgcagtccaacaaggag
tggctggacaagatcgagaaggatggcatggccctggtggcggagaagccggagacggag
ccagtggtcaaggagaagctgggcacgctgaagcggcagtggagcgagctggagtccacc
acgcaggccaaggcccagtgcctgttcgacgccaacaaggccgagctgttcacgcagagc
tgcgccgacctggacaagtggctggtgggcctggaggggcagatccagtccgacgactac
ggcaaggacctgaccagcgtcaacatcctgctcaagaagcaacagatgctggagagccag
gtggaggtgcgtcagaaggaggtggaggagctgcggtcgcaggcccaggcgctgcgtcag
gagggtcagaaggactcggacgaggtggacgggaggcggcgcggcgtggagagcaagttc
cagggcctgctggaccccctgcgccagcgcaagagcagcctcatggcctccagagagatc
caccagttcaaccgcgacgtggaggacgagatcctgtgggtggaggagagaatgcccctg
gctacgtccactgatcacggccacaacttacagaccgtccagctgctcatcaagaagaac
cagaccctgcagaaggaggtccagggccatcagccgcgctacgacgacatcttcgagcgc
agcaagagcatcgtgaaggcggacagccccaacggggacgtgatccgccagcgtctggcc
gacctgcggggcctgtgggcgcagatcatcgaggagacgggcaagcggcacggccgtctg
gaggaggcgcacagggcacagcagtactacttcgacgccgccgaggcagaggcctggatg
agcgagcaggagctctacatgatgtccgaggagaaggccaaggacgagcagagctcggtg
gccatgctgaagaagcaccagattgtggagcaggcggtggaggattacgccgagaccgtg
caccagctctcccagaccagcaggaacctggtggccgctggacatccggagagcgagcgg
atcagcatgcgccagtcgcaagtggacaagctgtacgccggcctcaaggacctgtccgag
gagcggcggggcaagctggacgagaggtcgcggctcttccagctcaaccgcgaggtggac
gacctggagcagtggatcgccgagcgcgaggtggtggccggctcgcacgaactgggccag
gactacgagcacgtcacaatgctgcaggagcgtttccgggagtttgcgcgcgacacaggc
aacatcggccaggagcgcgtggacgcggtcaaccagatggcggacgagctcatcaactcg
ggccacgcggacgcggccaccatcgccgagtggaaggacggcctgaacgaggcctgggcc
gacctgctggagctcatcgacacgcgcacgcagatcctggccgcctcctacgagctgcac
aagttctaccacgacgccaaggaggtgctgggccgcatcctggacaagcacaagaagctt
ccggaagagctcggccgcgaccagaacaccgtggagacgctgcagaggatgcacaccacc
ttcgagcacgacattcaggccttaggcacgcaggtgaagcagctgcaggaggatgcggtg
cgtctgcagtcggcgtatgcgggggacaaggcggaggacatcgcgcggcgcgagggcgag
gtgctggaggcctggcgtagcctgctggaggccagcgagggccggcgcgtacgcctgctg
gacaccagcgacaagttccgcttcttcagcatggtgcgcgacctcatgctctggatggag
gacgtcatccgcctcatcgacgcccaggagaagcccagggacgtgtcatccgtggagctt
ctgatgaacaaccaccagggcatcaaagctgagatcgacgcccgcaacgacagcttcact
acttgcattgagatgggcaaagcgctgcttgctcgtaaacactattcatcagaggagatc
aaagaaaagttgctacagctgacggacaagaggaaagagatgattgacaagtgggaggat
cggtgggagtggctgagactggtgctggaggtgcaccagttctcccgtgacgcgggggtg
gcggaggcctggctgtacggtcaggagccgtacctgtccagccgcgagatgggccagagc
gtggacgacgtggagaagctcatcaagcgccacgaggccttcgagaagtccgccgccacg
tgggaggagcgcttcgccgccctcgagagactgaccacgatggagttgttggaagtgaga
agactgcaagaggaagaggagaggaagaggcagcctccacctgtagaggcccagccagca
gaggctgcagaggcagaggcagcagcagcagcagcatccccccagcagaaggagggtgag
gcggcggcgtctcagaacgggctgtcgacggagccggactctccccgggaggccgcggga
ggaagtgatgtcgttaatggagtggtggagcccagtccgggcccgtcccctacggcgagc
cggaaggccaaacccagccaggcggccactctgccagccaagccccaggagacggccacc
cagatggaaggcttcctgcaccgcaagcatgagtgggagggccacaacaagaaggcctca
aataggtcctggcacaacgtgtactgcgtggtgaaccatcaggagatgggcttctacaag
gacagcaggagtgccggccagggcgtcccgtaccacagcgagatgcccgtccgcctgcgg
gacgccacctgcgaggtggccgtggactacaagaagaagaagcacgtcttcaaactcaaa
atttgtgatgggaacgagtatctcttccatgccaaagatgatgaggagatgaattcctgg
atccaggcgatctccagcgccaccccttcggaccgctctgaggtggcgccgagcagccac
agcacccccgcgtccagccgcgcccacaccctgcccgccaccgccaccgccgagtccagc
cccggcaagcgcgagaaggacaaggagaagcgcttcagcctcttcagcaagaagaagtag
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integrated database retrieval system
