Sardina pilchardus (sardine): 134064192
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Entry
134064192 CDS
T10667
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134064192 (pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
spil04990
]
134064192 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:
spil04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
134064192 (pdlim1)
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Arc_trans_TRASH
CCHC_ZFPM2
Motif
Other DBs
NCBI-GeneID:
134064192
NCBI-ProteinID:
XP_062376001
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Position
18:complement(3762015..3770140)
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AA seq
320 aa
AA seq
DB search
MPLRVVMQGPGPWGFRLVGGKDFEQPLTVSRVTLGSKAAQANLCIGDMILAIDGEATEGM
THLEAQNKIKGCVEEMVLSVDRSESKMWSPLASDEGKTNPYKMNLASEPQEVKPIGSAHN
RSAMPFSPGAPKVVTSQYNNPAGLYSSENIKDFNSAVDEVQTVAAANEAANMPDDAKAAG
IPGIPANSEVYKMLQENQESNEPPRQSTSFKVLQEILETGDPDKPSGFRSVKPPTNKMGA
SLGKAEKLPICDKCGSGIVGIVVKLRDKLRHPECYTCSDCDVNLKQKGHFFVEDKIYCEK
HARERVTPPEGYDVVTVFPK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgcccctccgggttgttatgcagggccctgggccttgggggttccgtctggtcggtggg
aaggatttcgaacagcccttgaccgtctcacgtgttacccttgggagtaaagcggcccag
gccaacctctgtatcggagacatgatcctggccatcgatggggaggcaacggaaggcatg
acgcacctggaggcccagaacaagatcaaaggatgtgtggaggaaatggtcctctctgtc
gataggtcagaatctaaaatgtggtctccactagcatcggacgagggcaagaccaaccct
tacaagatgaacctggcgtcagagccgcaggaagtgaaacccataggctccgcccacaac
aggagtgccatgccgttctccccaggtgcacccaaggtggtcaccagtcagtacaacaac
cccgccggcctgtactcctcagagaacatcaaggacttcaacagcgctgtggacgaggtc
cagactgtcgctgccgccaatgaagcagccaacatgccggatgatgcaaaggctgctggg
atacctgggattcccgcgaactcggaagtgtacaaaatgctgcaggagaaccaagagtcc
aacgagccgcctcgacagtccacatcttttaaagtgctgcaggaaatccttgaaacaggc
gaccctgacaaaccctcaggcttcaggagcgtcaagccccccactaataaaatgggtgcc
tccctgggtaaagcagagaagctgcctatctgtgacaaatgcggctcagggatcgtgggc
atcgtagtgaagctgcgtgacaagctgcgccacccggagtgctacacgtgctccgactgt
gacgtcaacctcaagcagaaaggccactttttcgtggaggacaagatctactgcgagaag
cacgcgcgcgaacgagtcacgccacccgagggctacgacgtcgtcacagtcttccctaag
tag
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