Sardina pilchardus (sardine): 134064234
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Entry
134064234 CDS
T10667
Symbol
tarbp1
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spil03016
]
134064234 (tarbp1)
03036 Chromosome and associated proteins [BR:
spil03036
]
134064234 (tarbp1)
Enzymes [BR:
spil01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
134064234 (tarbp1)
Transfer RNA biogenesis [BR:
spil03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
134064234 (tarbp1)
Chromosome and associated proteins [BR:
spil03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
134064234 (tarbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Rx_N
Motif
Other DBs
NCBI-GeneID:
134064234
NCBI-ProteinID:
XP_062376060
LinkDB
All DBs
Position
18:12338263..12358074
Genome browser
AA seq
1623 aa
AA seq
DB search
MSSLLINEFLTNCPNTCMVLDSVIWPIESWPDLERVEAVTILLDAVNVRCSDENRDSFSG
KVRALLWERCMPLLRQVSEIGSHKNEPGNKTLHALCRLLSSCLAFLRDSREVEKLTLIIL
PVFQSLERDDGSKAQLDIDVAVEVLAILLPSLTSDPEFIVKLTSCILAAVRILSDERVSK
IIVRVLFGLLNCVSDSSRRDILHRIWLDICSWHQIEKNATATSRTLLCLTAISDYLFPPR
EMSSLHDDHHNYLPDPRWSQSFWAIIQSGLTHRDNVARKRALYLLKKCVAQSEAENMEFG
SLESSDGDLKKHVSSEEMCFFRWTPSKSQALQQFWQDYALVMETLEENQIHVVLPVLNRV
NTLIETTASDNKGAALVHPSWLLCVYQRMFHSENKAVMKEGVYHLLELRLLKCPDIALAY
SQFIVGPFMDVLSESTLYHRSTNQIIGECPEVGLKLQEFFVNFFGSLPQENKGPVLLQLV
QRLGSRHWCAVPLLFLSQALARLPPCPLLNPEGLLALREVLRCTMITHQVLLRGAAQCFL
LHSALCLTDVQTVTLEEAFSFLVHFRSDESLCRGTALWKEVCDWLMNNEDKFRSAVGKSS
TVTPQEAELTSVATEGASVEGYVRHRLDVFLTVPASAEPTDGLPDSGEADLLALALLLWA
DVEESRGGGGGGGSVHVALERLLLPLVDVLRRLSTSLYLPLRKSDKSLQLLLRLLQLRKR
PTDAADSESSAGDGAAAAVSALALSVVEPVQAFIGRRLTGELQEVCDIERAGLYLAVLRE
LLQEFSGVPWYQGNMQQSFLPGVCTGSLRILSEPAEQVPSVHGQVQKAVAMSVLSLLCEV
TASGVFHGSVSVDSFRDYFYLPEHLNQALLKPMATASDVDDSPLLRDWGRVAAQFIRDQW
ASLSVLQRGAAAGPPRSPEAAGLRVVLQAAVEALSLLPSNQVLPVLDFMALLLPQVAVCE
ESLCAEAVALSWKVLQGLSGNASDFWPALQAFVRLAFHRTALELIPEQAPTLTTTIQQIG
CELMELSEVKSGVFNTLVSHCCHTWLPANSGSAPGDDTCFSSALTHLDILTEACLHGPVF
RRDQRLIQEVQVYVEQLGDQCAANTAITSDNRDEQFPRVAALAFLSHLQPSNELHHALME
KLVLQLVEKDRGISKSKARYYSNSLQHRIRNRVWQTLLFLLPKLRREFVVGTLLGYAFEA
GFSSNQASVKYLIEWAMLLMLYHNPSHMDQFWACFSGDQEKTKTSICTFLSVLVHLNTLL
PRLEDKTGQWRKALEVILQWCFSHNFSVRLYALLALKRVWGLEGPRAATEEALGGADALG
GLATVIQACLNQAEAMQNTGNAMKNWVRIQEHFFFGIFDPLRDYSVETIFFAFPRLSDLA
DDEWIPPWKFEKMVVFSANASLPVRNPVADLSQMLPGDWIQQDKGELEQEERWAEVQKKI
TAWRLSFQDQEPQLAAQQRALRLGKLTSALLVVASLIDKPTNLGGLCRTCEIFGASGLVL
DSLRHVSDKQFQALSVSSELWLPLMEVKPVDLSGFLRGKKAEGYCIVGVEQTANSQSLQE
YRFPEKSLLLLGNEREGIPANLLQLLDVCVEIPQRGVTRSLNVHVSAALLVWEYTRQHIP
PTN
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctcttctgataaatgaatttttaacaaattgccccaacacgtgtatggtttta
gactccgttatatggccgatagagtcgtggccagatttggagagggttgaggcagttacc
atcttgctggacgcagttaatgtgagatgctctgatgaaaatcgtgatagtttttctggt
aaagtgagagctctcttgtgggagagatgcatgccgcttttaaggcaagtttcagaaatt
ggttcccataaaaacgagcccggaaataagacgctacatgctctttgtcgcctgcttagc
agctgtctagcttttctacgtgactctagggaagtagaaaaactgactcttataatctta
ccggtgtttcaaagcttggagagggacgatggtagcaaagcacagcttgatatagacgta
gcagtagaggttctggcaattctgctgccttcactgacgtctgacccggagtttatagtg
aagttgacatcatgcattctcgcagcggtgagaatcctgtctgatgaacgggtgtcaaaa
atcatcgttcgtgttttgtttgggcttctcaactgtgttagtgacagcagcagaagagac
attctccatcgcatatggctggacatatgcagctggcaccaaatcgaaaagaatgcgact
gccacatctcggacattactgtgccttactgccatctcagactacctctttccacccaga
gaaatgtcctcactacacgatgaccatcataactacctcccagaccccagatggtcacag
tcgttttgggcaattattcagtctggactcacccacagagataacgtggcacgcaagcga
gccctttacttgttgaagaaatgtgtcgctcagtccgaagcagagaacatggagtttggg
tctctcgaatcgtcagacggagatcttaagaagcatgtttcttctgaagagatgtgcttt
ttcagatggacacccagcaagagtcaagcactgcagcaattctggcaggattatgcattg
gtaatggagactcttgaggaaaatcagattcatgttgtgcttcctgtactaaaccgagta
aatacactgattgaaacaacagcaagcgacaacaaaggtgctgcattggtgcacccttca
tggttgctgtgtgtgtaccagcgcatgttccacagcgagaacaaggcggtgatgaaggaa
ggagtgtaccacctgttggagctgcggctgctgaagtgtccggacatcgccctggcttac
tcccagttcattgttggccctttcatggatgtcttgtctgagagcactctctaccacagg
tcaacaaatcaaattattggggagtgtcctgaagttgggctgaagcttcaggagttcttt
gtcaacttctttggcagtttaccccaagagaacaaaggcccggtcctcctgcagcttgtg
cagcggctggggtctcggcactggtgtgctgtccccctcctcttcctctcccaggccctg
gctcgcctcccgccctgcccactgctaaacccagagggactgctggcactcagggaggtg
ctacgctgcacgatgatcactcaccaggttctactcagaggtgctgctcagtgcttcttg
ctccacagcgccctctgcctcactgatgtgcaaacagtgactctggaggaggcgtttagc
ttcctggttcactttcgttcggatgagtctctgtgccgaggaacagcactgtggaaggag
gtctgtgactggctcatgaataatgaagacaagttcaggtctgccgtgggaaaatcaagc
actgtgacaccacaggaggccgagctgaccagcgtagccacagagggggcctcggtggag
ggctacgtccggcaccgactggacgttttcctcaccgtacctgccagtgcagagcctaca
gacggtctgccagacagtggagaggccgatctcctggctctggccctcctcctctgggcg
gacgtggaggagagccgaggtggaggtggaggcggaggcagtgtccacgtggccctggag
cgcctgctgctccccctggtggacgtgctgcgccggctcagcaccagcctctacctgccg
ctgcgcaagagtgacaagagcctacagctgctgctgcgcctcctccagctgaggaagaga
cccacagacgccgcggactcagagtctagtgcaggtgatggtgcagcggctgctgtctca
gctctagcgctgagtgtggtggagcctgttcaggccttcatcggccgcaggttgactggg
gagctgcaggaggtgtgtgacatagagcgcgctgggttgtatctggccgtgctccgagag
ctgttgcaggagttcagcggggtgccgtggtaccagggcaacatgcaacagagcttcttg
cctggcgtctgtacaggcagcctgcggatcctcagcgaacccgccgagcaggtaccctct
gtccacgggcaggtgcagaaggctgtggcgatgtcagtgttgtctctgctgtgtgaggtg
actgcaagtggagtgtttcacggcagcgtgtctgtcgactccttcagggactacttctac
ctccctgagcacctcaaccaggccctactgaagcccatggccacagccagtgacgttgat
gacagtcccctgcttcgagactggggccgtgttgccgcccagttcatccgtgaccagtgg
gccagcctgagcgtgctgcagcggggggcggcggccggacccccgagatctccagaggcc
gcagggctccgtgtggtcctgcaggctgcggtggaggccctctctctgctgcccagtaac
caggtgctgcccgtgctggacttcatggcccttctgctgccacaggtggcagtatgtgaa
gagtctctttgtgcggaggcagtggctctcagctggaaagtgttgcagggcttgagcggc
aatgccagtgacttctggccggcgctgcaggcgtttgtacggctggccttccaccggacc
gccctggagctgatcccagaacaggcacccacgctcaccaccaccatacagcagatcggc
tgtgagctgatggagctgtcggaggtcaagtctggggtgttcaacacgctcgtcagccac
tgctgccacacctggctgcccgccaactcaggaagtgcacctggggatgacacctgcttc
tccagcgccctgacgcacctggacatcctgacggaggcgtgcctgcatgggccagtgttc
cgcagagaccagaggctgatccaggaagtccaggtttatgtggagcagctcggggaccag
tgtgctgccaacacggccattaccagtgacaacagggatgagcagttcccacgtgttgct
gcactggccttcctcagccacctgcaaccatccaatgagctccaccacgcactgatggag
aagctggtgctgcagttggtggagaaggatagaggaatatccaaatcgaaagcgcggtac
tatagtaactccttgcagcaccgcataaggaacagggtgtggcagaccctgctgtttcta
ctgcccaaactgagaagggagtttgtcgtggggacgttactgggctacgcctttgaggcc
ggcttcagcagtaaccaggcctcagtgaagtacctgatcgagtgggccatgctgctcatg
ctctaccacaacccctcccacatggaccagttctgggcctgctttagtggtgaccaagag
aagactaagactagtatctgcacctttctgtcagtgctagtgcacttgaacaccctgctg
cccagactggaggacaagacaggacagtggcgtaaagccctggaggtgatcctgcagtgg
tgtttcagccataacttcagcgtgcgcctgtacgcgctgctggccctgaagagggtctgg
ggcctggagggtccgcgggccgcgaccgaggaggccctgggtggagcggacgctctcggg
gggctggccacggtcatccaggcctgtctgaaccaggccgaggccatgcagaacacagga
aatgccatgaaaaactgggttaggatacaggagcatttcttcttcggcatattcgaccca
ctgagagactatagtgtggagaccatcttctttgctttcccccgcttgtcggacctggca
gatgacgaatggatacctccttggaagtttgagaagatggtggtgttctcagcgaacgca
tcgctccctgtgaggaacccagtggcagatcttagccagatgctgccgggagactggatc
cagcaggacaaaggagagctggagcaggaggagcgctgggcagaggtgcagaagaagatc
accgcctggaggctgagcttccaggaccaggagccacagctagcagcccagcagagggcg
ctccgcctgggcaaactcaccagcgccctcctggtggttgcctcgctcatcgacaagccc
accaaccttggagggttgtgccgcacatgcgagatcttcggggccagtggtctggtgctg
gacagcctccgccacgtcagcgacaaacaattccaggcactcagtgtctcctcagaactg
tggcttccgctgatggaggtgaagccggtcgacttatcaggcttcctgcgggggaagaag
gcggaaggctactgcattgtgggagtggaacagacggccaacagccagagcctgcaggag
tacaggttccctgagaagagcctcctgctgctgggaaacgagagggaaggcatcccggca
aacctgctgcagctgctggacgtgtgcgtggagatcccgcagcggggcgtcacgcggtca
ctcaacgtgcatgtgagcgctgccctgttggtctgggaatacacgcgtcagcacatcccc
cctaccaactga
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