Sardina pilchardus (sardine): 134064463
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Entry
134064463 CDS
T10667
Symbol
cdhr1a
Name
(RefSeq) cadherin-related family member 1
KO
K16501
cadherin-related family member 1
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
spil04515
]
134064463 (cdhr1a)
Cell adhesion molecules [BR:
spil04515
]
Cadherins
Cadherin related
134064463 (cdhr1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
RibLong
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
134064463
NCBI-ProteinID:
XP_062376370
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Position
18:14716039..14728345
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AA seq
848 aa
AA seq
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MVYAQTDYAPYFFDNGPNSNSGNLALFSLSEDTPVGTQIYILNGTDPEGQPVSYGLTFEP
GSKEYFRVDSKSGTVTLIAEIDREVQDEIEVFVSITDGRNKVTEKVQVFVMDVNDERPQF
HNMPAIVDVLESTASGSSIFQVEAIDKDTGSGGSLTYFIQSYETNGKFGIDRHSGVLRIK
QGENLDFEKSTTHFVTVVVKDGGGHYKGKPQIQSASATLTINVVDTQDTPPIFIGIPYFG
YVYEVSSPGSEIFTVFAKDGDVGNPNPINYLIHSGADGAFVINKTSGCITLRAYPAHLKK
EMFHIKVKASEVGPDGNLMDYAITTVTIRVVDLNNHPPTFYGENGPQNMFELTMYEHPPE
GEILRGLKISVNDSDQGANAKFNLRLVGPGRILRVVPQTVLNEAQVTILVEDSTAIDYEK
SQFLTFKLLAVEIDTPERFSATADVVIHLLDTNDNAPKFSSEYYISRIPENSPGGSNVVT
VTATDPDSGLWGEVKYSIYGAGSDLFLIQSQSGIIYTQPWASLDAEVKSKYNFYVKAEDT
EGKYGLAEVFVTILDLNDHSPEFNNNFLETTMIIGAPVKIEAVDEDAEEPNNVIEYSIMK
TEPDNIFDINSDTGEIMLKPYIKSMDIVQNITNQKECTWSVVVQARDRGSPSFSTTTVVK
IDITEATQLSGPFASFLMQSRDNPIKILGMITCVICSMLVATVLVSTVTFVRNKKSNKIL
PSRRIIRRRPKHRQWGFKGPGNQGRNFEVKEEPENGDNVNYNNNVNTVCHHHHHHPPPPM
PPPDLPPPPPPCFSRSGERQWAGPPVSYSTVVLKPTKRPVKTKENHVNSALVSELKMRFE
QRRMASQY
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggtatatgcgcaaacagattatgctccatacttctttgataatgggcccaatagtaac
agtggtaatctggcactattcagtctctcagaagacacaccagttggaacacaaatatat
attttaaatggaacagacccagaaggccaaccagttagctatggactgacctttgaacca
ggatccaaagaatattttagagtggattccaaatctggaacagttactcttatcgcggag
attgacagagaggtgcaagatgagattgaagtatttgtcagtataacagatggccgtaat
aaagtaactgagaaggtacaggtgtttgtgatggatgttaatgatgagagaccacagttc
cacaacatgcctgcaattgtggatgttttagagagtactgcgtctggcagcagtatcttc
caagtggaggctatagataaggacacgggttcaggtggttccctcacctactttatccag
agctacgaaacgaatggaaagtttggaatagaccggcacagcggagtgctccgcatcaag
cagggagagaatctggactttgagaagtccacaacacatttcgtcaccgtggtagtaaag
gacggaggtggacattataaaggaaagccccaaatccagtcggcatcggctactttgacc
atcaatgtggttgacactcaggatacacctcctatcttcatcggcatcccatattttgga
tatgtttatgaagtgtcatcaccaggctccgaaatattcacagtttttgctaaagatgga
gatgtagggaatccaaatcctatcaattatttgattcattctggtgcagatggggccttc
gtcatcaataagacgagtggctgcattaccctgcgggcttaccctgcccatctaaagaag
gaaatgtttcatattaaagtaaaggcttcagaggtgggaccagatggaaacttaatggac
tatgccatcaccacagtgaccatacgagtagtggacctgaacaaccaccctcccaccttt
tacggagaaaacggacctcagaacatgtttgagctcacaatgtacgagcaccccccagag
ggagaaattctgagaggactgaagatctccgtcaatgactctgatcagggagctaatgca
aagtttaacctgaggctagttgggcctggtcggatattacgagttgtccctcagactgtg
ctcaacgaggctcaggtcaccatcttagtggaagattctacagccatagactacgagaaa
tcacagtttcttacattcaagttgcttgcagtggagattgacacaccggaaagattcagc
gcaacggcagacgtagtgattcacctactggacaccaatgacaatgcccctaaattctct
tcagagtactatatttctcgaattcctgaaaactccccaggaggatccaatgttgtcaca
gttacagctacagatccagattcaggactgtggggtgaagtcaagtattccatatatggc
gctggatcagacttgttcctaattcagtcacagtcaggaatcatttatactcaaccttgg
gctagcctggatgctgaggtcaagtccaagtataacttctatgtaaaagctgaggacaca
gaaggaaagtacggtttggctgaggtcttcgtaacaattcttgacctcaatgaccactca
cctgaattcaacaacaacttcttggagacaaccatgatcattggagcaccagtcaaaata
gaggcggttgatgaagatgctgaagagcccaataacgtcattgagtactccatcatgaaa
actgagccagacaacatctttgacatcaattctgacacgggcgagatcatgctgaagcct
tacatcaagtccatggacattgttcaaaacataaccaaccagaaagaatgcacatggtct
gtggtggtccaggcaagagacagaggatcgccctcgttcagcaccaccaccgtggtgaag
attgacatcaccgaggcgactcaactcagtggaccattcgcgtcctttttaatgcaaagt
agggacaatcccataaaaatcctgggcatgattacctgtgtcatttgtagtatgctcgtt
gccacagtcttggtgtccacggtcacgtttgtgcgcaacaaaaagtccaacaagatcttg
cccagccgccgcatcatcaggaggagaccaaagcacaggcagtggggatttaaagggcca
ggaaaccaaggaaggaattttgaagtgaaagaggagcctgaaaatggagacaacgttaac
tataacaacaacgtcaacacagtctgtcaccaccaccaccaccacccaccccctcctatg
ccgcccccagacctccctccaccaccacccccatgcttctctcgctcaggcgagcggcag
tgggccggtccccccgtgagctacagcaccgtggttctaaagcccaccaaaaggcccgtt
aagaccaaagagaaccacgtgaactcggcgctggtctctgagctgaagatgcgatttgaa
cagagaaggatggccagccaatactga
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