Sardina pilchardus (sardine): 134064617
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Entry
134064617 CDS
T10667
Symbol
rbpja
Name
(RefSeq) recombination signal binding protein for immunoglobulin kappa J region a isoform X1
KO
K06053
recombining binding protein suppressor of hairless
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
134064617 (rbpja)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spil03000
]
134064617 (rbpja)
Transcription factors [BR:
spil03000
]
Eukaryotic type
Other transcription factors
Others
134064617 (rbpja)
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Gene cluster
GFIT
Motif
Pfam:
BTD
LAG1-DNAbind
TIG_SUH
TIG
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
134064617
NCBI-ProteinID:
XP_062376468
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Position
2:15788125..15802758
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AA seq
499 aa
AA seq
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MPWSAGNLAMKFGELPQPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPP
PCVYLMGCGWKKKKELMEREGCSEQESQPCAFIGIGNSEQEMQQLNLEGKNFCTAKTLYI
SDSDKRKHFMLSVKMFYGNSADIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALF
NRLRSQTVSTRYLHVEGGNFHASSQQWGAFYIHLLDDEESEGEEFTVRDGYIHYGQTVKL
VCSVTGMALPRLVIRKVDKQTALMDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQA
TPCPKETNKEMINDGASWTIISTDKAEYTFYEGMGPVPTSVTPVPVVESLQLNGGGDVAM
LELTGQNFTPHLRVWFGDVEADTMYRCGESVLCVVPDISAFREGWRWVRQPVQVPVTLVR
NDGIIYSTALTFTYTPEPGPRPHCGAAGAILRTSSSSPSSSSSSSSSSTAGLMLPSSTDS
QAGFGTGSVSSSSSAMSVS
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgccttggtctgctggaaacctagcaatgaaatttggggagttacctcagccaaagcgt
cttacgagggaagcaatgcgcaattatttgaaggagcggggtgatcagacggtgctcata
ttgcatgctaaagttgcacagaaatcatatggaaacgaaaaaaggttcttctgcccgcct
ccgtgtgtgtacttgatgggttgtggctggaagaagaagaaggagctgatggagagggag
ggttgctcagaacaggagtcacagccttgtgcctttattggcatcggcaacagtgagcag
gagatgcagcaactcaacttagaggggaagaacttctgcactgcaaaaactctgtatata
tcggactctgacaagaggaaacactttatgctttcggtgaaaatgttctatgggaacagc
gcggatattggggttttcctcagcaagagaatcaaggtcatctccaaaccctcaaagaag
aagcagtccctgaagaacgcagacttgtgcattgcgtctgggaccaaagtagcgctgttc
aaccgcctccgctctcaaacagtcagcacacgttacctgcatgtggagggaggcaacttc
catgccagctcacagcagtggggagccttctacatccacctcttggatgatgaagagtcc
gagggggaggagttcaccgtgagggatggctacatccactatggtcagacggtgaagctg
gtgtgctcagtcactggcatggctttaccgcggctggttatccgtaaagtggacaaacag
acggccctgatggacgcggacgacccagtgtcgcagctgcataagtgtgctttctacctg
aaggacaccgagaggatgtacctgtgtctttcccaggagcgcatcattcagttccaggca
accccttgccccaaagagacaaacaaagaaatgatcaacgatggagcgtcatggacaatc
atcagcacagacaaagccgagtacaccttctatgaaggcatgggccccgtgcctacatca
gtgacccccgtgcctgtggtggagagcctacagctgaatggcgggggagatgttgccatg
ctagagctgacgggtcagaacttcaccccccacctgcgtgtgtggtttggggacgttgag
gctgacactatgtacaggtgtggcgagagtgtgctttgcgtagtgcctgacatctctgcg
ttccgcgagggctggcggtgggtgcggcagccggtccaggtgcctgtgacgctggtgcgc
aacgacggcatcatctactccacggctctgaccttcacctacacgcccgagccgggccct
cggccccactgcggcgccgccggggccatcctgaggacctcgtcttcctcaccctcctct
tcctcctcgtcatcttcctcatccacagcaggccttatgctgccctccagtacagacagc
caggcaggcttcggcacgggcagtgtctcctcgtcctcctcggctatgtctgtgtcctaa
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