Sardina pilchardus (sardine): 134064795
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Entry
134064795 CDS
T10667
Symbol
pcdh7a
Name
(RefSeq) protocadherin-7 isoform X1
KO
K16498
protocadherin delta 1
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
134064795 (pcdh7a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
spil01009
]
134064795 (pcdh7a)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
spil04515
]
134064795 (pcdh7a)
Protein phosphatases and associated proteins [BR:
spil01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134064795 (pcdh7a)
Cell adhesion molecules [BR:
spil04515
]
Cadherins
Protocadherins
134064795 (pcdh7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
134064795
NCBI-ProteinID:
XP_062376480
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All DBs
Position
2:16256412..16286756
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AA seq
1375 aa
AA seq
DB search
MRSGSLGAVLPARCCYLVLLLQLLTQLPRVNSALRYRVAEEGPADVRIGNVAADLGLSSS
GIGTGDVTFALESGSEYFKIDNVTGELTTTVRRIDRERLPQCQMIFDENECFLDFEVSVI
GPLQSWVDLFEGRVVITDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGI
DRYELIQDGAGPSAPSASSSLRRPGGGPMGRADGGDRRRGPDAMMAAAGAAPGGGSGGRS
SVFELQVADTPDGEKQPQLIVKGPLDREARDSYELVLRVRDGGNPPRSSQALLRVAITDV
NDNSPRFDRPVYEAEMAENTPPGTPVLQVRATDRDVGVNGQVEYVFGAATESVRRLLRLD
EATGWLSVLHRIDREEVVQLRFTITARDRGQPPRTDRSTVVLNVRDENDNVPVVEIRKIG
RIPVLDGSAFVPENVLVDTPVALVQVSDRDQGENGAVTCTVVGDVPFTLKPAGETALAPP
PAADEAFDRNRKKYFLHTSALLDYETTREYSVTIVAVDSGSPSLSSNSSLMVRVVDVNDH
APTFAQNLIEVHFAENNSPGERVVTVVAADADSGKNAEIAYSLDPSVNGAFYIDTDNGDI
RASGALDREVRERYEFRVIARDKGAPSLQGSATVVVQVTDRNDNPPKFVQEVFTFYVKEN
LLANSPVGMVTVTDADEGENAELSLFVEDDEGEGEDGEASGRRDEVFSIENNTGTIFSSA
SFDRERRNAYTFRVRAVDGGDPPLSATATVSLFVTDENDNAPSVTAPSNESYALLSPASS
ARTVVRTVDASDRDMGSNADLRFTLVGGNPFRLFEIGPTSGVITLTEPLERRHRGLHRLV
VRVNDSGVPSLCATALVHVFINESLVNATLVDAQVARSLAAPLSLDIAGDPDSERALGKQ
RLSVAIGVLAGAAAVILVILLVVTARQCGAQGKNGYEAGKPEEDLFSPPASAQSQADKRG
GCGTAERGRKPRRDKRSTGTSAKSERSLYSGIVTVNGCGGGGARHDDEDEDEDSASASER
IAARYCAAAGDPSSPRLGTARRHHHQSSPDLARHYKSSSPLPAVHLQPHSPPIEGKKHQA
VQELPPTNTFTGNNGASSGSANADAMSLGSDQCSDYGCQTASKYGKQQTLRRVTFSVVSQ
PQDPGCYDSGLEDSETPSSKSSSGPRLGALPLPEDGYERTTPEGSVGEEEHVENDPRQLP
DVALTGKCTRECDEFGHSDTCWMPVQVSPRRHPGNEPRLSTFASPGGCMGVGGDRNNNNE
DDEGSEPDADDEDGEGSERGGSGGRRPGLRRHVRDTLANGDPLGDRNSNVGDHNRNLLNR
KMTSASYDTFSSAGFGRRGLEEEEQRTPEVIPLTRTGGDYKTTSCLTLSRREVYL
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atgaggagcgggagccttggcgcagtgctccccgcgcgctgctgctacctcgtgctcctc
ctgcagctgctgactcagctaccgcgagtcaactcagcgctgcgataccgcgtggctgaa
gaggggcccgctgatgtgcggatcggaaacgttgcagcagatctgggcttatcctcatct
ggtatcggtaccggagacgtgacctttgcactggagtcaggctcagagtacttcaaaatt
gacaatgtgacgggggagctaacaaccacagttcgccggattgaccgtgagcgcctgcca
cagtgtcagatgatttttgatgagaatgagtgcttcttggattttgaggtgtctgtcatt
ggcccgttgcaaagctgggtggacctgttcgagggtcgtgtagtcatcactgacatcaat
gacaacaccccctcgtttccctcccctgtcctcaccctgtcggtggaggagaaccggccc
atcggcactctctatctcctgcccaccgccacagaccgcgactttgggcgcaacggcata
gaccgttatgagcttatccaagacggcgcgggaccctcagctccgtccgcctcctcctct
ctccggcgccctggaggagggcctatgggacgagcagacggcggggaccgcagacgaggc
cccgacgccatgatggcggcggcgggagcggccccaggaggaggaagtggcgggcgaagc
agcgtgttcgagttgcaggtagctgacacacctgacggtgagaagcagcctcagctcatt
gtgaaaggccctctggaccgcgaggcccgcgactcctacgagctcgtgctgcgtgttcgg
gacggcggcaacccgccacgctcctcgcaggctctcctccgcgtggccatcactgacgtg
aacgacaacagcccccgcttcgacaggcccgtgtacgaggccgagatggccgaaaacacc
ccgcccggcacacctgtgctacaggtgcgtgccacggaccgtgacgtgggcgtcaacggc
caggtggagtacgtgtttggcgcggccaccgagtctgtcaggcgcctactgcgcctggat
gaagccactggctggctcagtgtccttcaccggatcgaccgcgaggaagtggttcagcta
cggttcaccatcacagcccgcgaccgcggccagccccctcgcaccgaccgcagcaccgtg
gtgctcaacgtccgcgacgagaacgacaacgtgcccgtagtggagatccgcaagatcgga
cgcatcccggtgctggacgggtccgccttcgtccctgaaaacgtcctggtggacacaccg
gtggccttggtgcaggtgtcggaccgggaccaaggggagaatggagcagtgacgtgcacc
gtggtgggagacgtgcctttcaccctcaagccggcgggcgagaccgcactggcccctcca
cccgccgcagacgaggccttcgacaggaaccgtaagaagtacttcctgcacacatctgct
ctgctcgactacgagacgacccgcgagtacagcgtgaccattgtcgccgtggactcgggg
agtcccagcctctccagtaacagctcgctgatggtgcgagtggtggatgtgaacgaccac
gcgccgaccttcgcccagaacctgatcgaggtgcactttgcagagaacaactctccaggt
gagagagtggtcacggtagtagcagctgacgcagacagtggcaaaaacgctgagattgcg
tattccctggacccctccgtgaacggggcattctacattgacaccgataacggggacata
cgggcctcgggggcactagaccgcgaggtgagggagcgctatgagttccgggtgatcgcc
cgggacaagggcgccccgtctctgcagggctcggccactgtggtggtgcaggtgaccgac
agaaacgacaacccgcccaagtttgtccaggaggtcttcaccttttacgtcaaggagaac
ctgttggccaacagccccgtcggcatggtgacggtgaccgacgcggacgagggcgagaac
gcggagctgagcctgttcgtggaggacgacgagggcgaaggcgaggacggcgaggccagc
gggagaagggacgaggtcttctccatcgagaacaacaccggcaccatcttctcgtccgcc
tccttcgaccgcgagcgccgcaacgcctacaccttccgcgtgcgcgccgtcgacggcggc
gacccccctctctcggccaccgccaccgtctccctgttcgtgacggacgaaaacgacaac
gccccctccgtcaccgccccgtccaacgagtcctacgccctcctgtcccccgccagcagc
gccaggaccgtggtgcgcacggtggacgcctccgacagggacatgggctccaacgctgac
ctccgcttcaccctggtcggtggcaacccgttccgcctgttcgagatcggccccaccagc
ggggtgatcaccttgacggagcctctggagagacggcaccgaggcctgcaccggctggtg
gtgcgggttaacgacagcggggtgccctcgctctgcgccactgccctggtgcatgtcttc
atcaacgagagcctggtgaacgccactctggtggacgctcaggtggcgcgcagcctggca
gcgcccttgtctctggacatcgcgggtgacccggacagcgagcgggccctgggtaagcag
cggctgagcgtggccatcggcgtgctggcgggggcggccgcggtcatcctggtcatcctg
ctggtggtgacggcgcggcagtgcggggcgcagggcaagaacggctacgaggcgggcaag
cccgaggaggacctgttcagcccgccggcctcggcccagtcgcaggccgacaagcgcggc
ggctgcggcacggcggagcgcgggcgaaagccgcggcgggacaagcgctccacgggcacc
tccgccaagtccgagcgctcgctctacagcggcatcgtgacggtcaacggctgcggtggc
gggggagcccggcacgacgacgaggacgaggacgaggacagcgccagcgccagcgagcgc
atcgccgcgcgctactgtgccgccgccggggaccccagcagcccgcgcctgggcacggcg
cgccgacaccaccaccagtccagcccggacctggcgcgccactacaagtccagctccccg
ctgcccgccgtccacctgcagccgcactcgccgcccatcgagggcaagaagcaccaggcc
gtccaggagctgccacccaccaacaccttcacggggaacaacggggccagctcgggcagt
gccaacgccgacgccatgtcgctgggttcagaccagtgctctgactatggctgccagaca
gcaagcaagtacggcaaacagcagacgctgcggcgtgttaccttctcggtggtgagccag
ccccaggacccgggctgttacgacagtggcctggaggactcggagacgcccagcagcaag
agctcgtcagggccacggctgggggcactgcccctgccagaggacggctacgagaggacc
actccagagggcagtgtgggtgaagaggagcatgtggagaatgacccgaggcagctgccc
gacgtggccttgaccgggaagtgcacgcgggagtgtgacgagttcggccactccgacacc
tgctggatgcccgtgcaggtttcgccccggaggcatcccggcaacgagccgcgcctgtcc
acctttgcctcacccggcggctgcatgggggtcggaggcgaccgcaacaacaacaacgag
gacgacgagggcagcgagccggacgcggacgacgaagacggggagggctcggagcgcggc
ggctcgggcggacggagacccggcctgcgcaggcacgtccgggacactctggccaacgga
gacccgctgggagaccgcaacagcaacgtcggcgaccacaaccgcaacctgctcaaccgc
aagatgacctcggcgtcctacgacacgttcagcagcgccgggttcggacgcagggggctg
gaggaggaggaacagcgcaccccggaggtcatcccgctcacgcggaccggcggcgactac
aagaccacctcctgtctcacactctcacgcagagaggtgtacctgtga
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