Sardina pilchardus (sardine): 134065749
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Entry
134065749 CDS
T10667
Symbol
arfgef1
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134065749 (arfgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134065749 (arfgef1)
Membrane trafficking [BR:
spil04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
134065749 (arfgef1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
134065749
NCBI-ProteinID:
XP_062376777
LinkDB
All DBs
Position
19:24086816..24151263
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AA seq
1941 aa
AA seq
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MYEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKAESEKLSSLLSCSPP
TGDGKSGSSTLPPIKSKTNFIEADKYFLPFELACQSKCPRIVSTSLDCLQKLIAYGHLTG
SAPDNTAPGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQA
VRTCYNIYLASKNLINQTTAKATLTQMLNVIFARMENQALQEAKQMERERHRQHSPLSQQ
EPDSPQQPQPQTPQTPQTPQTPQTPQTPQTPQTPQQQHASSTPPAKAPPPLPPPQEPAEG
GGKAETETETETEQGSGGPTETPHYENPEPENGSEFCAAENEQTEADQATAAAAQSAAQN
STDAVVEEGTPNYEEKAQEIVQSILQEVVNTVAGRHCLDPVHLCSDAKEGGGEAEPEVEA
EPVEAEPVEAEPVEAEPAEGTPNSLEDEGTLGSDSENVHANGIPGTPISASFTPSLPDDR
LSVSSNDTQESGTTGPAPGAKFSHILQKDAFLVFRSLCKLSMKPLSDGPPDPKSHELRSK
VLSLQLLLSILQNAGPIFKTNEMFINAIKQYLCVALSKNGVSAVPEVFELSLSIFLTLLS
NFKTHLKMQIEVFFKEIFLYILETSTSSYDHKWMVIQTLTRICADAQSVVDIYVNYDCDL
NAANIFERLVNDLSKIAQGRAGHELGTTPAQELTLRKKGLECLVSILKCMVEWSKDQYVN
PNSQTSLGQEKPSEQDTNDSKHPETINRYGSINSLDSTASSGIGSYSTQMSGTDNPEQFE
VLKQQKEIIEQGIDLFNKKPKRGIQYLQEQGMLGTTPEDIAQFLHQEDRLDSTQVGEHLG
DNDRFNKEVMYAYVDQMDFQGKDFVSALRLFLEGFRLPGEAQKIDRLMEKFAARYLECNQ
GQTLFASADTAYVLAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAI
YDEIAGKKISMKETKELTIKSNKQSVASEKQRRLLYNVEMEQMAKTAKALMEAVSHVQAP
FTSATHLEHVRPMFKLAWTPFLAAFSVGLQDCDDTEVASLCLEGIRCAIRIACIFTIQLE
RDAYVQALARFTLLTASSGITEMKQKNIDTIKTLITVAHTDGNYLGNSWLEILKCISQLE
LAQLIGTGVKARYISGTVRGKEGFITSTKEQNSDEYLGLVGGTVDRKQIASIQESIGETS
SQSVVVAVDRIFTGSTRLDGNAIVDFVRWLCAVSMDELASPTHPRMFSLQKIVEISYYNM
GRIRLQWSRIWEVIGDHFNKVGCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFL
RPFEHIMKKNRSPTIRDMVVRCIAQMVNSQAGNIRSGWKNIFSVFHLAASDQDESIVELA
FQTTGHIVTNVFEKHFLATIDSFQDAVKCLSEFACNASFPDTSMEAIRLIRHCAKYVSDR
PQSFKDYTSDDMNVAPEDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEIMKTYGH
TFEKHWWQDLFRIVFRIFDNMKLPEQQTEKAEWMTTTCNHALYAICDVFTQYFESLSDVL
LDDILAQLYWCVQQDNEQLARSGTNCLENVVILNGEKFSPETWDKTCNCMLDIFKTTIPH
ALLTWRPEGDITQMDSDKQLDSISQKSIDIQARTEDQQSINSMEKVPMDNRRQSQFSTVS
GMNEDGPRARTPTKVLEQRLFAALLIKCVVQLELIQTIDNIVFFPATSKKEDAENFAAAQ
RDALDADVAVERQDQGMYRYLTSAQLFKLLDCLLESHRFAKAFNSNNEQRTALWKAGFKG
KSKPNLLKQETSSLACGLRILFRMYTDPSRQDAWEEVQQRLLNVCSDAVAYFLTLTSESH
REAWTNLLLLFLTKILKISDDRFKAHASRYYPLLCEIMQFDLIPELRAVLRKFFLRIGMV
FQIAQLPAAVQGASEDATQEV
NT seq
5826 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaaggcaaaaaaacgaaaaacatgtttttaacccgagctttggaaaagatcttg
gccgacaaggaggttaaaaaggctcaccattctcaactgcgcaaagcttgtgaggtggca
ttggaggagatcaaggcagagtcggagaagttaagcagtctcctctcttgcagtccgccc
acgggagacggcaaatcaggttccagcactctgccgccaatcaaatcaaagaccaacttc
atcgaggcagataagtacttcttgccgttcgagttggcctgtcagtccaaatgtccacgc
atcgtaagcacatcactagactgtttacagaaattaattgcatatggccacctgacgggg
agcgccccggacaacaccgccccgggcaagaagctcatcgacaggatcatcgagaccata
tgcggctgcttccaaggcccccagacggatgagggtgtacagctccagatcattaaggcc
ttgctcacggcagtgacgtcccagcacatcgagatccacgaggggaccgtcctccaggcc
gtgcggacatgctacaacatctacctggccagcaagaacctcatcaaccagaccacggcc
aaggccacgctcacccagatgctgaatgtcatcttcgcccgcatggagaaccaagcactc
caggaggcgaagcagatggagcgcgagcggcaccgacagcactcccccctcagccagcag
gagccggactctccccagcagccccagccccagaccccccagacgccccaaacccctcag
acccctcagacgccccagaccccccagacccctcaaacccctcagcagcagcatgccagc
agcacgcctccagccaaggcccccccacccctgccaccgccccaggagccggccgaggga
ggggggaaggccgagacggagacagagacggagaccgagcagggcagcggaggccccacc
gagaccccccactacgagaaccccgagcccgagaacggctctgagttctgcgccgccgag
aacgagcagaccgaggctgaccaggccaccgctgccgctgcgcagagtgcagcacagaac
agcacggatgctgttgtagaagaagggactccgaactatgaagaaaaggcccaggagatt
gtccagagcatcctgcaggaagtggtcaacacagtggcaggaaggcactgcctggaccct
gttcatctgtgttcagatgccaaggaggggggcggcgaggccgagcctgaggtcgaggcc
gagccagtggaggccgagccggtggaggccgagccggtggaggccgagccagccgagggc
acgccgaactcgctggaggacgaggggacgctgggcagcgacagcgagaatgtgcacgcc
aacggcatccccggcacgcccatctcggccagcttcactccgtccctgcctgacgacagg
ctgtccgtctcctctaacgacactcaggaatcgggaactacagggcctgcacctggtgct
aagttctctcacattctgcagaaggacgccttcttagttttccgctctctctgcaagctg
tctatgaagcccctctccgatggtcccccagatccaaagtcccacgagctgcggtcgaag
gtgctgtcgctgcagctgctgctgtccatcctgcagaacgccgggcccatcttcaagacc
aacgagatgttcatcaacgccatcaagcagtacctgtgcgtggcgctctccaagaacggc
gtgtcggccgtgcccgaggtcttcgagctctcgctctccatcttcctcacgctgctgtcc
aacttcaagacccatctcaagatgcaaattgaggtgtttttcaaggagatttttctgtac
attctcgagacgtccactagctcctacgaccataagtggatggtcattcagactcttacc
aggatatgtgccgatgcccagagcgtggtggacatctatgtgaactatgattgtgatttg
aatgctgctaatattttcgaaaggctcgtcaatgacctttccaagattgcacagggacgt
gcaggccatgagctcggcacgacccccgcacaggagctgaccctgagaaagaagggactg
gaatgtctggtgtccatcctcaagtgcatggtggagtggagcaaagatcaatacgtcaac
cccaactcccagaccagcctgggtcaagagaagccttcagagcaggacacaaatgacagc
aagcacccggagaccattaatcgctacggcagcatcaactctctggactcgacggcctcc
tcgggcatcgggagctacagcacacagatgtccggcaccgacaaccccgagcagtttgag
gtcctcaagcagcagaaggagatcatagagcagggcattgacctgttcaacaagaaacca
aagaggggcatccagtacctgcaggagcaaggcatgctgggaaccaccccagaggacatt
gcccagtttttacaccaagaggacaggcttgattctactcaggtgggagagcacctgggg
gacaacgatcgctttaacaaagaggtcatgtacgcctacgtggaccagatggacttccag
ggcaaggactttgtgtcggcgctgcgtttgttcctcgagggcttccgtctccccggggag
gcccagaagattgatcggctgatggagaagttcgctgctagatacttagaatgcaaccag
ggccaaacgctgtttgccagtgcagacactgcatacgtcctggcttactcaatcatcatg
ttgacaacagacctccacagcccacaggtaaaaaataaaatgacaaaagagcagtacatc
aagatgaacagggggattaacgacagcaaagacctcccggaggagtatctgtcagccatc
tacgacgagattgctggcaagaagatttctatgaaggagactaaggaattaaccatcaag
tccaataaacagagtgtggccagtgagaagcagaggcggctgctgtacaacgtggagatg
gagcagatggccaagacggccaaagccctgatggaggccgtcagtcatgtccaggccccc
ttcaccagcgccacacacctggagcacgtcaggcccatgtttaagctggcatggacgccc
ttcctggcggccttcagcgtgggcctgcaggactgtgacgacacggaggtggcctcgctc
tgtctggagggcatccgctgtgccatcaggatagcctgcatcttcaccatccagctggag
cgggacgcgtacgtccaggccctcgcccgcttcaccctgctgaccgccagctcgggcatc
accgagatgaagcagaagaacatcgacaccatcaagaccctcatcaccgtcgcccacacc
gacggaaactacctgggcaactcgtggctcgagatcctgaagtgcatcagtcagctggag
ctggcgcagctcatcggcaccggggtgaaggcgcgctacatctcagggacggtgcgcggc
aaggagggcttcatcaccagcaccaaggagcagaactccgacgagtacctggggctggtg
ggggggaccgtggaccgcaagcagatcgccagcatccaggagtccatcggcgagaccagc
tctcagagtgtggtggtggctgtggacaggatatttacgggctccaccagactggatggt
aatgcaattgtggactttgtgcgctggctgtgcgccgtctccatggacgagttggcctcg
cccacgcacccgcgcatgttcagcctgcagaagatcgtggagatctcctactacaacatg
ggccgcatccgcctgcagtggtcccgcatctgggaggtcatcggggaccatttcaacaag
gtgggctgtaatcccaacgaggacgtggccatcttcgccgtggactccctgaggcagctg
tccatgaagttcctggagaagggggagctggccaacttccgcttccagaaggacttcctg
cggccgtttgagcacatcatgaagaagaacagatctcccaccatcagggacatggtggtg
cgctgcatcgctcagatggtcaactctcaggccggcaacatccgctccggctggaagaac
atcttctccgtgttccatctggcggcgtccgaccaggacgagagcatcgtggagctggcc
ttccagaccactggacacatcgtcacgaatgtatttgagaagcacttcctggccaccatc
gactccttccaggatgcggtgaagtgcctgtccgagttcgcctgcaatgcctccttccct
gacacgagcatggaagccatccgcctcatccgacactgcgccaaatatgtgtccgaccga
ccacagtctttcaaagactacaccagtgatgacatgaatgtggccccagaggaccgtgtg
tgggtgcggggctggttccccatcctctttgagctctcctgcatcatcaacaggtgcaag
ctggacgtcaggacaaggggcctgacggtgatgtttgagatcatgaagacctacggacac
accttcgagaagcactggtggcaggacctgttcaggatcgtcttcagaatcttcgacaac
atgaagctgcccgagcagcagaccgagaaagcagaatggatgaccacaacctgcaaccat
gcactttatgccatctgtgacgtgttcacgcagtactttgagtccctcagcgacgtcctg
ctggacgatatcctcgcccagctttactggtgtgtccagcaagataatgagcagctggcc
agatcgggcaccaactgtctggagaacgtggtcattctgaacggggagaagttcagcccg
gagacctgggacaagacctgcaactgcatgctggacatcttcaagaccaccatccctcac
gcactcttaacatggaggccggaaggtgatatcacacagatggactccgacaagcagctg
gactcaatttcccagaagtcaatagacatccaggcacgcacagaagatcagcagtccatc
aatagcatggagaaggtccctatggacaaccggagacagtctcagttcagcacggtctcg
ggcatgaatgaggacggccccagagcgaggacccctacgaaggtcctggagcagaggctg
ttcgccgccctcctcatcaagtgcgtggtccagctggagctgatccagaccatagacaac
atcgtcttcttccccgccaccagcaagaaggaggacgccgagaacttcgccgctgctcag
agggacgcactggacgcagacgtggccgttgagaggcaggaccagggcatgtaccgctac
ctgacctccgcgcagctcttcaagctgctggactgcctgctggagtcgcaccgcttcgcc
aaggccttcaactccaacaacgagcagaggaccgcactctggaaggccggtttcaagggg
aagtccaagcccaacctgctgaagcaggagaccagcagcctggcgtgtggcctgcgcatc
ctgttccgcatgtacaccgacccctcacgccaggacgcctgggaggaggtgcagcagcgc
ctgctcaatgtgtgcagcgacgccgtggcctacttcctcaccctgacctcggagagtcac
agggaggcctggaccaacctgctgctcctcttcctcaccaagatcctgaagatcagcgac
gacaggttcaaagcccatgccagtcggtactaccccctgctgtgtgagatcatgcagttt
gacctgattccagagctcagggctgttctgcggaagttcttcttgagaattgggatggtg
ttccaaatcgcccagctgcctgcagctgtgcaaggagcttctgaggacgccacccaggag
gtctag
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