Sardina pilchardus (sardine): 134065780
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Entry
134065780 CDS
T10667
Symbol
trdmt1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spil03016
]
134065780 (trdmt1)
Enzymes [BR:
spil01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
134065780 (trdmt1)
Transfer RNA biogenesis [BR:
spil03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
134065780 (trdmt1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
134065780
NCBI-ProteinID:
XP_062376844
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Position
19:complement(28322798..28329685)
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AA seq
386 aa
AA seq
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MDGLRVLELYSGIGGMHYALKESGVMAEVVAAVDVNTTANHIYKHNFPNTTLLPKTIEGI
TVSDFDKLGFDMILMSPPCQPFTRIGLQGDVSDPRAKSFLYILDLLPRLSKLPRFILLEN
VKGFETSSVRDALLKTLKDCGYSFQEFLLTPTCLGIPNSRLRYFLVAKAPPDSFTFQMSS
EILESFPSSSGDDASSETSMAPDCPSECLGSTNGEDGSILYKLETAQDAHRKMGQNCNES
VRRIQEFLDVHGEDEGDVEQYLLPPKTLLRYALLMDIVRPSCRRSVCFTKGYGHYVEGTG
SVLQSCVAEEMEEAFRSLELQPEEEKLRRLQRLKLRYFSPREIANLMGFPADFTFPEGVS
VKQCYRVLGNSLNVHVVAQLIKVMLS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggatggtctgcgtgtattagaattatacagtgggataggtggaatgcactacgcattg
aaagagagtggagtgatggctgaggtggtggctgctgtggacgtcaatacaacagccaat
cacatttacaaacataatttccccaacacaactctattgcccaagaccatcgagggaatc
actgtaagcgattttgacaaattgggatttgacatgattttgatgagtcccccatgccaa
cccttcacacgtatcggactacaaggtgatgtatctgacccaagagcaaaaagcttcctg
tacatccttgaccttctgccaaggctaagtaaactgccgcgcttcattctgctggagaac
gtgaaaggctttgagacttccagtgtaagagatgctctgctgaagacacttaaggattgt
ggttacagcttccaggagttcctgctcacacccacttgtcttggaataccaaactcaaga
ctgcgctatttcctggtagcaaaagcacctccagattccttcacattccagatgagctca
gagattttggaaagcttcccatcgtcctctggtgatgatgcttcttcagagacctccatg
gcgccagattgtccctctgagtgtctaggcagtacaaatggagaggacgggtccatcttg
tacaagctggagacggcccaggacgcccataggaagatgggtcagaactgcaacgagtcg
gtcagaaggatacaagagttcctggatgtccacggagaagatgaaggagacgtagagcag
tacctgctcccccctaagacacttctgcgctatgccctgctcatggacattgtgcggcct
tcatgtagacgatctgtgtgcttcacaaaagggtatggccactatgtggagggcacaggc
tcggtgctgcagtcctgcgtggcggaggagatggaggaggcgttccgctcactggagctg
cagccagaggaggagaagctgcggcgtctacagcggctgaagctgcgctacttctctccc
agagagatcgctaatctcatgggcttccctgctgacttcactttcccagagggtgtctcg
gtgaaacagtgttaccgggtgctggggaacagtctgaatgtccatgtggtggcccaactc
atcaaagtgatgctgtcttga
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