Sardina pilchardus (sardine): 134065857
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Entry
134065857 CDS
T10667
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
spil04040
]
134065857 (trpc1)
Ion channels [BR:
spil04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
134065857 (trpc1)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
134065857
NCBI-ProteinID:
XP_062376933
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Position
19:complement(10365576..10390091)
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AA seq
806 aa
AA seq
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MVKWSLLPASGIHISVLPYSVSVVMAALYQGTDASSPDKYLALKDVREVKEETTLDEKLF
LLACEKGDYYMVKKLLEEKRHGELNINCVDVLGRDAVTISIENENLDILQLLLEHGCQAT
DALLVAIDSEVVGAVDILLNHRPRRASKPSMAKLMQRIQNPEYSTTMDVAPVILAAHRNN
YEILTMLLKQDISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEE
DPILRAFELSADLRELSLVEVEFRNDYDELAQQCKMFAKDLLAQARNSRELEVILNHTSS
EDHVDKRGLLEERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGEMASYRRKHTGLKM
ALVLSVTLLWPLLSVCYLLGPRSRVGQVIHTPFVKFIIHSASYFTFLLLLNLYSLVYNED
TKNTMGPALEMIDYLLIIWIVGMVWSDVKRLWYEGLEGFLEESRNLLSFVMNSLYLATFA
LKVVAHSKFKDKAEERKKWDAFHPILVAEGLFAVANVLSYLRLFFMYTTSSILGPLQISM
GQMLQEFGKFLGLFLLVLISFTIGLTQLYGKDQKDPAKNQTEDCEGIFCPRQSNDAFHTF
MGTCYALFWYMFSLAHVVLFVTRISYTEELRSFVGALIVGTYNIVVVIVLTKLLVAMLHK
SFRQIANHEDKEWKFARAKLWLSYFDDKCTLPPPFNILPSPKTLCYLVTSMSKWVCSHTS
TGRVKRQNSLKEWRNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQD
LSKFRNEMRDLLGFRTSKYAMFYPRS
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggttaaatggtcgcttcttcctgctagtgggatacacatcagtgttttgccctactcg
gtctccgtcgtaatggctgctctctatcagggcacagatgcatcctcaccagataagtac
ctagcgttgaaagacgtgagagaggtaaaagaggagacgacgctggacgagaagcttttc
ctactggcctgcgagaagggtgactattacatggtgaagaagcttcttgaggagaagaga
cacggtgagctgaacatcaactgtgtggacgtgttgggcagagacgctgtcactatttcc
attgagaatgagaacctggacatcctccagttgctgttggagcatggctgccaggcgacg
gatgccttgctggtggccatcgactcagaggtggttggagcggtggacattctcctcaac
caccgacccagaagggcctccaagccttccatggccaaactgatgcagcgcatccagaat
ccggagtattccaccaccatggacgtggcgccggtgatcctggctgcccacaggaacaac
tacgagatactgaccatgctgctgaagcaggacatctctctgccccgaccgcatgccgtg
ggctgtgagtgcacgctctgcaacgccaaaaacaagaaggacagcctgcgccactccagg
ttccgtctggacatctaccggtgcctggccagcccgtctctgatcatgctgaccgaggag
gaccccatcctgcgggcctttgagctcagcgctgacctgcgcgagctcagcttggtggaa
gtggagttcaggaacgactatgacgaactggcccagcagtgcaagatgttcgccaaggac
ctgctggcacaggccaggaactctcgggagctggaggtcatcctgaaccacacgtccagc
gaggaccacgtggacaagaggggcctgctggaggagcgcatgaacctcagccgcctcaaa
ctggccatcaagtacaaccagaaggagtttgtggcgcagtccaactgccagcagttcctc
aacacggtgtggttcggcgagatggccagctaccggcgcaagcacacgggcctcaagatg
gcgctggtgctgagcgtgacgctgctgtggccgctgctgtccgtgtgctacctgctgggg
ccgcgctcgcgcgtgggccaggtcatccacacgcccttcgtcaagttcatcatccacagc
gcctcctacttcaccttcctgctgctgctcaacctctactcgctggtgtacaacgaggac
accaagaacaccatgggccccgcgctggagatgatcgactacctgctcatcatctggatc
gtggggatggtgtggtcggacgtgaagcgcctttggtacgagggcctggagggcttcctg
gaggagtcgcgcaacctgctgagctttgtcatgaactccctctacctggccacgtttgcc
ctgaaagtggtggcccacagcaagtttaaggacaaggcggaagagaggaagaaatgggac
gccttccaccccatcctggtggccgaggggctgttcgccgtggccaacgtcctgagctac
ctccgcctcttcttcatgtacaccaccagctccatcctggggccgctgcagatctctatg
ggtcagatgttgcaggagtttggcaagttcctgggcctgttcttgctagtgctcatctcc
ttcaccataggtctcacccagctgtatggaaaagaccagaaggaccccgccaagaaccag
acagaggactgtgagggcatcttctgcccacggcagagcaacgatgcattccacacgttc
atgggcacatgctatgccctcttctggtacatgttttccctggcgcacgtggtcctgttc
gtcacccggatcagctacacggaggagctgcgctcgttcgtgggcgccctcatcgtgggc
acctacaacatcgtggtggtcatcgtgctcaccaagctcctagtggccatgctgcacaag
agcttcagacagattgcgaaccatgaggacaaagagtggaagtttgcgcgtgccaagctg
tggctcagttattttgatgacaagtgcaccctgccaccgcccttcaacatcctgccctcc
ccaaagaccctgtgctacctggtgaccagcatgagcaagtgggtctgctcacacacctcc
acgggcagagtgaaacgacagaacagccttaaggagtggaggaacctgaagcagaagaga
gacgagaactaccagaagatcatgtgctgcctggtgcaccggtacctgacctccacacgc
cagaagatgcagagcaccgaccaggccaccgtggagaacctcaacgacctgcgccaggac
ctgtccaagttccgcaacgagatgagggacctcctgggcttccgcacctccaaatatgcc
atgttctaccccagaagctaa
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