Sardina pilchardus (sardine): 134066325
Help
Entry
134066325 CDS
T10667
Symbol
shha
Name
(RefSeq) sonic hedgehog protein isoform X1
KO
K11988
sonic hedgehog
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
134066325 (shha)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spil01002
]
134066325 (shha)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
spil00536
]
134066325 (shha)
Peptidases and inhibitors [BR:
spil01002
]
Cysteine peptidases
Family C46: hedgehog family
134066325 (shha)
Glycosaminoglycan binding proteins [BR:
spil00536
]
Heparan sulfate / Heparin
Morphogens
134066325 (shha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
DUF7764
Peptidase_M15_3
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
134066325
NCBI-ProteinID:
XP_062377614
LinkDB
All DBs
Position
19:complement(8194723..8250751)
Genome browser
AA seq
417 aa
AA seq
DB search
MLLLTRVVLVGLLCLSLVSSGLGCGPGRGYGRRKHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSAYATLQHGVRKEVRDLRPGDQVLSADSAGNLVYSPFIM
FMDQDSTTRRVFYVIETTAPKRKIILTAAHLLFVVSNSTDDLSTMTTTFASKVKPGQRVI
VVDDKHAQLKPVIVARIYTEEHEGSFAPVTAQGTIVVDQVLASCYAVIENHNLAHWALMP
LRLGHHLSTLLLPKDHTNSNATGQEEGIHWYSKLLYQMGTWLLDSHALHPLGMSLSS
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgttaacgagagtcgtgctggtcggtttgctctgtttgtccttggtgtcgtcc
gggctgggttgcggtccaggaaggggctacggcaggagaaaacatccgaagaagctgacg
cctcttgcttacaagcagttcattcccaacgttgcggagaagaccctaggggccagcggc
agatatgaggggaagatcacacggaactctgagcgatttaaagaactgactcccaattac
aatcccgacattatctttaaggatgaggagaacaccggcgcagacaggctcatgacacag
agatgtaaggacaagctcaactcgttggctatctcggtgatgaaccagtggcctggcgtc
aaactacgcgtcaccgagggatgggacgaggacggtcaccacttcgaagaatcgctgcat
tatgaaggccgcgccgtggacataacaacctctgaccgggacaagagcaaatatggcacc
ctgtctcggctagccgtggaggctggcttcgattgggtctattatgagtccaaggcccac
atccactgctcagtgaaagcagaaaactcagtggcagcaaaatctggaggatgcttcccg
ggctcggcttatgcaaccctgcaacacggggtaaggaaagaggtgagagatctgagacct
ggggaccaagtgttgtcagcagacagcgctggaaatctcgtctacagccctttcatcatg
ttcatggatcaagactcgacgacacgtcgagtgttttatgtgattgagacaacagcgccc
aagcgcaagatcatcctcaccgcggcccatctcctgtttgtggtcagcaactccacggat
gacctcagcaccatgacgaccacgttcgccagcaaggtcaagcccggacaaagggtcatc
gttgtcgatgataaacacgcgcaattgaagcctgtaattgtggctcggatttacacggaa
gagcacgaaggttccttcgcgccagtgacagcgcaaggaacgatagttgtcgaccaggta
ctggcctcatgttatgcagttatcgagaatcacaacctggcacattgggccctaatgccg
ctaaggttgggccatcatctatccacgttgttactccccaaagaccataccaactctaac
gccactgggcaagaggagggaattcactggtactccaagcttctatatcaaatgggaacg
tggctcttggacagtcacgcgctccatcctttggggatgtcattatcgagttga
DBGET
integrated database retrieval system
