Sardina pilchardus (sardine): 134067071
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Entry
134067071 CDS
T10667
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04137
Mitophagy - animal
spil04140
Autophagy - animal
spil04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134067071
04137 Mitophagy - animal
134067071
04148 Efferocytosis
134067071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spil03000
]
134067071
Transcription factors [BR:
spil03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
134067071
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
TMEM51
HLH
Thymidylate_kin
Sas-6-like_oligomerization
Motif
Other DBs
NCBI-GeneID:
134067071
NCBI-ProteinID:
XP_062378120
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Position
20:complement(7485369..7501593)
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AA seq
751 aa
AA seq
DB search
MDTGATPPKKRVNSERRKEKSRDAARCRRGKESEVFYELANELPLPHSISSNLDKASVMR
LAISYLRLRRVLNTAVKVEQESELDIQMNSMFLKALDGFLMVLSDDGDMVYLSENVNKCL
GLPQIDLTGNSIFDFTHPCDHDEIREMLTHKTASSKKGKGQDAERNFLLRMKCTLTSRGR
TVNIKSATWKVLRCTGQVRMCDLVVGATAAVGGGKSSSSATVPSLVLICQPIPHPANIEV
PLDSRTFLSRHTLDMRFTYCDERITELLGYESDDLLNRSVYEYYHALDSDHLTKTHHSLF
AKGQVCTGQYRMLAKRGGYVWVETQATVIYNNKNSQPQCVVCVNYVLSGVEMQELVLSME
QTCVHRVKQERDEGASCLAQCPLQVAVKKEQAHEMEEEEEEEEAMKMETPSSVEVLREES
EALTLLAPPITGDAVITLDLSTDSDITVLKDIQLFSDVMLPSSSSLLTPPTSDLSEDTHS
PFPESSPPDCSSAESSAGPCSPLELSDLSTDFKTDLVERLFSMEMGADTPFVTQQSMDDL
DLEMLAPYIPMDDDFQLRTLSPTNSLSLSPLKLQSQAPTPPPSQQASTSPSEMPLAGIVS
QMDAPKTPTPLASYVFQRSPPLATESTAQPVSVRNITDQANASGNAPLKRKIETVPTFSQ
AVGLVVLDMDQPSSKIQKLQLAGAQGLSNTTILLLPSDLAHRLLARSSQGESNLGSLPQL
TRDDCEVNVPVNARQHLLQGEELLRALDQLI
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggacactggtgcaacacctccgaagaaaagggtgaactcggagcggcgcaaggagaag
tcgcgcgatgcagcccgctgtcggcgggggaaggagtcggaggtgttctacgagctggcc
aacgagctgccgctaccgcacagcatcagctccaacctggacaaggcctcggtcatgagg
ctcgccatcagctacctccgcctccgcagagtcctcaacactgctgtaaaagtggagcag
gagtctgagctggacattcagatgaacagcatgttcttgaaagctctggacggtttcctg
atggttctgtctgatgatggagacatggtctacctgtctgagaatgtcaacaagtgtctg
gggctcccccagattgatctgactggcaacagcatctttgacttcacacacccctgtgac
catgacgagatcagagagatgctcacccacaaaacagcttcctctaagaaagggaagggg
caagatgcagagaggaattttctgctgaggatgaaatgcacactgaccagcagggggcgc
actgtcaacatcaaatcagctacatggaaggtcctgcgctgtacgggtcaagtgcgcatg
tgtgacctcgtggtgggggccacggcggcggtgggtggtggaaagtcgtcctcctctgcc
accgtcccctccctggtgctcatctgccagcccatccctcaccccgctaacatcgaggtc
ccgctggactccaggaccttcctcagccgccacacgctggacatgaggttcacctactgc
gacgaacgtattactgaattgttgggctatgagtcagacgacctgctgaaccgatctgtg
tatgagtactatcatgccctggattctgaccatctcaccaagacacaccacagcttgttt
gctaaaggtcaggtgtgcacgggtcagtacaggatgctggctaagaggggaggctatgtg
tgggtcgagactcaggccactgtcatctacaacaacaagaactcgcaaccacagtgtgtg
gtgtgtgtcaactacgtactcagtggtgtggagatgcaggagctggttctgtccatggag
cagacgtgtgtccaccgcgtgaagcaggagcgggacgagggggccagctgcctggcacag
tgccccctgcaggtggctgtgaagaaggagcaggcccacgagatggaggaggaggaggag
gaggaagaggcgatgaagatggagactccgtcgtctgtggaggtgctgagggaggagtcc
gaggcactgaccctgctagctccaccaatcacaggagacgcagtcatcacactggacctt
agcacagactcagacatcactgtcctgaaggacatccaactcttcagtgatgtaatgctg
ccctcctccagctctctgctgactccaccaacctctgacctgtcggaggacacacactcc
cccttcccagaatcctcccctccagactgttccagcgccgagagctcagcagggccctgt
agtcctctggagttatctgacctgagtacagacttcaagaccgacctggtggagcgcctc
ttctccatggagatgggcgccgacacacccttcgtaacacagcagtccatggatgatctg
gatctggagatgctggccccgtacattcctatggatgatgacttccagctgcgcacgctc
tcccccaccaactccctctcgctcagcccgctcaaactccagtctcaggctccaactcct
ccacccagccagcaggcctccaccagccccagcgagatgcccctcgctgggatagttagc
cagatggacgcccccaagactccaactccactggcatcttacgtcttccagagatcgccc
ccactggcgaccgagagtactgcccaaccagtcagtgtcagaaacatcactgaccaggcc
aacgccagtggcaatgccccactgaagagaaaaatagagactgtccccactttctcacag
gctgttggactggtggtattagacatggatcagccaagcagtaagatccagaagctacag
ctggctggagcgcagggtctcagcaacaccaccatactgttactgccttctgacctggcc
catcgactgctggctcgttcctctcagggcgagtcaaatcttgggtcactcccccagctg
actcgtgacgactgcgaggtcaacgtcccggttaatgcccggcaacacctgctgcaggga
gaggagcttctgcgagcgctggaccagcttatctga
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