Sardina pilchardus (sardine): 134067152
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Entry
134067152 CDS
T10667
Symbol
vps39
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04140
Autophagy - animal
spil04148
Efferocytosis
spil05132
Salmonella infection
Brite
Membrane trafficking [BR:
spil04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
134067152 (vps39)
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Other DBs
NCBI-GeneID:
134067152
NCBI-ProteinID:
XP_062378220
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Position
20:complement(18647988..18685628)
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AA seq
876 aa
AA seq
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MHDAYEPVPILEKLPLQIDCLAAWEDWLLVGTKPGHLLLYRIRKDAGTNRFEVTLEKSNK
NFSKKIQQLYVVSQYKILVSLLENNIHVHDLLTFQQITVVSKAKGATLFACDLQQSSSGE
AKLRMCVAVKKKLQLYFWKDREFHELQGDFAAPDIPKSMAWCENSICVGFKRDYYLIRMD
GRGTIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGVCTQKCALNWTDIPVAME
HQPPYIIAVLPRYVEIRTFEPRLLVQSVELQRPRFITSAGPNVVYVASNHFVWRLVPVSI
ACQIRQLLQDKQFELALQLAKMKDDSDGDKRQQIHHIQNLYAFNLFCQKRFDDSMQVFAK
LGTDPTHVIGLYPDLLPADYRKQLHYPNPLPTLSGAELEKAHLALIDYLTQKRSHLVKQL
NDSDPSTTSPLMEGTPTIKSRKKLLQIIDTTLLKCYLHTNVALVSPLLRLENNHCHIEES
EYVLKKAHKYSELIILYEKKGLHQKALQVLLDQSTKANSPLKGHERTVQYLQRLGVENIG
IIFEFSPWVLKTCPEDGLKIFTEDLPEVEALPRDKVLNFLKEGFKELAVPYLEHIVHVWE
ESGPEFHNVLILLYLDRVQALMKEYLNSLPQGVSAVAAGFEEGQLGEFRNKLLNFLEISC
NYEPGRLISDFPFDGLLEERALLLGRMGKHEQALFIYVHILNDTHMAEEYCHKHYDKLTD
GNKDVYLSLLRMYLSPPDVHCLGPIKMELSEPQTNLQAALHVLELHHSKLNTTKAINLLP
ANTQINEIRVFLESVLEETAQGKRYNQVLKSLLQAEFLRVQEERIFHQQVKCVITEEKTC
RVCKKKIGNSAFARYPNGVVVHYFCCKDRSVCPTEQ
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgcatgatgcctatgagcccgtccctatcttggagaaattgcctctccagattgattgc
ctggcggcctgggaggactggcttcttgtcggaacaaaaccaggccatcttcttttgtac
aggatcaggaaagatgcaggtaccaataggtttgaggtgaccctagaaaagtccaacaag
aacttttcaaaaaagattcagcagctgtatgtggtgtcacagtacaaaattctggtcagc
cttcttgagaataacatccatgttcatgacctcctgacgttccagcagatcactgttgtg
tccaaggccaaaggggccactctctttgcttgtgatcttcagcaatcctcatctggagag
gccaagttaaggatgtgtgtggctgtgaaaaagaaactccagctgtatttctggaaagac
agagagttccatgagctgcagggtgattttgcggcccctgacatccccaagtccatggca
tggtgtgaaaattcaatctgtgtcggattcaagcgggactactacctgatcagaatggat
ggccgtggaactatcaaggagctctttcctactgggaaacagctagaacccttggttgcc
ccactggctgatgggaaagtggcggtgggacaggatgatctcacagttgtactgaatgag
gaaggagtttgcacccagaagtgtgccctcaactggacagacattcctgttgccatggag
caccagccgccgtacatcatcgccgtgcttccgcgctacgtggagatccgcacgtttgag
ccgcgactgctggtgcagagtgttgagctgcagagaccgcggttcatcacctccgcaggg
cctaacgttgtgtacgtggccagcaaccattttgtgtggcgcctggtgcccgtctccatc
gcctgccagatccggcagctcctgcaggacaagcagtttgagctggctcttcagctggcg
aagatgaaggacgactcggacggcgataagagacagcagatccaccacatccagaacctg
tacgccttcaacctcttctgccagaagcgcttcgatgactccatgcaggtgttcgccaaa
ctgggaacagatcccacacacgtgattgggctgtatccagacctgctaccagccgactac
cgcaagcagctgcactaccccaaccctctgcccacgctgtcgggagccgaactggagaag
gcccacctagctctgatcgattatcttacacagaaacgcagtcacttggtcaagcagctg
aatgactctgacccctctacgacctcgccccttatggaaggcacgccgaccatcaagagc
cgcaagaaactgctgcagatcatcgacaccacactcctcaaatgctacctccataccaat
gtggctttagtgtctcctctcctgcggctggagaacaaccactgccacattgaggagagc
gagtatgtgttaaagaaggcccacaaatacagcgaactcattatcctctatgagaagaag
ggcttgcaccagaaagccctgcaggtcctgttggaccagtccaccaaggccaactcgcca
ctcaagggccatgagaggacagtccaatacctacagagactgggggtggaaaacattggc
atcattttcgagttctctccttgggtgttgaaaacctgccccgaggatggcctcaagatc
ttcacggaggacctcccggaggtggaggcgctgcccagagacaaagtgctcaacttcctg
aaagagggcttcaaggagctggccgtgccgtacctggagcacatcgtgcacgtgtgggag
gagtcaggccccgagttccacaacgtgctcatcctgctctacctggaccgcgtgcaggcg
ctcatgaaggagtacctcaactctctgccccagggagtgtctgcggtagcagcaggcttt
gaggagggacagctcggggagttcagaaacaaactgctcaacttcctggagatctcctgc
aactacgaacccggacgactcatcagcgactttccttttgatggtctgcttgaggagcga
gcgttgctgctgggccgcatggggaagcacgagcaggccctcttcatctacgtccacatc
ctgaacgacacacacatggctgaggaatactgtcataagcattacgacaagctaacagat
ggcaataaggatgtctacctgtccctgctgcgcatgtacctgtcccctccagacgtccac
tgcctcggccccatcaagatggagctgtcggagccccagaccaacctgcaggcggcgctg
cacgttctggagctgcaccacagcaagctgaacaccaccaaggccatcaacctgctcccg
gcaaacacgcagatcaatgagatccgtgtgtttctggagagcgtgctggaggagacggcg
cagggcaagcgctacaaccaggtgctcaagagtctgctgcaggccgagttcctacgggtg
caagaggagaggatcttccaccagcaggtgaaatgcgtgataaccgaggagaagacctgc
agagtgtgcaagaagaaaattgggaatagtgcctttgcccggtatcctaacggtgtggtg
gtgcattacttctgctgcaaggaccgcagtgtgtgtcccacggagcagtga
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