Sardina pilchardus (sardine): 134067239
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Entry
134067239 CDS
T10667
Name
(RefSeq) guanylate-binding protein 1-like isoform X1
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
134067239
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
zf-UBR
MMR_HSR1
RHD3_GTPase
PLC-beta_C
HEF_HK
Motif
Other DBs
NCBI-GeneID:
134067239
NCBI-ProteinID:
XP_062378376
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All DBs
Position
20:30215360..30234946
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AA seq
713 aa
AA seq
DB search
MSGQRGMQRCRTVSRKGETIYSCRDCALDPTCVFCQDCFQNSAHKAHAYKKRVSSGGSAC
SCGDVVGWRSAPYCSKHNPAASNWETPSTGLWDQEQDSRAPFKGGTVSMQAPVCLIDNGP
DGRMSVQQEALKILEQIQQPVVVVAVVGLYRTGKSYLMNRLAGKHAGFALGGTIESKTKG
IWMWCVPHPSKPGHTLVLLDTEGLGDVEKGDEKHDTWIFCLAVLLSSTLVYNSMGTIDNT
ALEKLQFVTELTEHIRVKSSEHNRNTELMRVFPSFVWTVRDFTLELEKEGKPITADQYLE
HALKIKPVDARSPPGVEKHNKVRQNLRDFFAVRRCFVMERPANSRAMKRMEELTDADLDP
SFVQQAKDFCSYVHNSAQVKTMRGGRGLTGRMLGSLAQTYVEAIRSGKVPSLESAVESLA
LIQNGRAVKEALEFYRAEMGRRVKFPTETHEALSTIHTAATKQAISIFINASFNDEDQKH
QLQLMSSMDKEYVAACKNNVKVSRKECWSVIPRTFASLEAGLKDGSYMRSGGYGEFRRAL
DSGARLYRSEKRKGVMGEEVLTEYLEQKNVAGEGIRRADISLTEAQKKMEENKVKQQEAE
QQRRLLEQRTQMQQQALRDLKSSNEENIRQLEAKVERERERSLNEMERVLAAKLKEQREL
LEHGFRRRAEDMEDDIRKLKKEQKREQEEKPGFFQKLGSGFSSIGSALFGWMF
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgagtggacagagagggatgcagcgctgcagaacagtgtccaggaagggagagaccatc
tactcttgcagggactgtgctctggaccccacctgtgtgttctgtcaggactgtttccag
aacagcgcacacaaagcccatgcctataagaagcgtgtgtcatcaggaggcagcgcctgt
agctgtggggatgtggtgggctggcgtagcgccccctactgctcaaagcacaaccctgca
gcctctaactgggagacccccagcacaggcctctgggaccaggagcaggactccagggca
ccatttaaaggaggaactgtttccatgcaggccccggtgtgcctgatagataacgggcct
gatgggcgcatgagtgtccagcaggaggcgctaaagatcctggagcagatccagcagccg
gtggtggtggtggccgtggtggggctctaccggacgggcaaatcctacctcatgaaccgc
ctggccggcaaacacgcaggctttgctctgggcggcaccatcgagtccaagaccaaaggc
atctggatgtggtgtgtgcctcacccctctaaaccaggacacaccctggtgctgctggac
acagagggccttggagacgtggagaagggcgatgagaagcacgacacgtggatcttctgt
ctggctgttctactcagcagcactctggtctacaacagcatgggcaccatcgacaacact
gccctggagaaactgcagtttgtgacagaactgacggagcacatcagagtgaagtccagc
gagcacaacaggaacacggagctgatgcgtgtcttcccctcctttgtgtggacggtcaga
gacttcactctggagctggagaaggagggcaaacccatcactgctgatcagtacctggag
catgccctgaagatcaaaccagttgacgctaggtcccctccaggagttgagaagcacaac
aaggtgcgccagaacctgagggacttcttcgctgtgcgacgctgcttcgtgatggagcgt
ccagccaatagcagagcgatgaagcgcatggaggagctgacggacgcggacctggatccc
agcttcgtgcagcaggccaaggacttctgcagctacgtccacaacagcgcccaggtcaag
accatgagaggaggccgggggctgaccggcaggatgctgggcagcctggcacagacgtac
gtggaggcgatccgcagtggcaaagtgccgtctctggagagtgctgtggagtcgctggcg
ctgatccagaacggccgggccgtgaaggaggcgttggagttctaccgggcagagatgggg
cgcagagtgaagttcccaactgagactcacgaggcgctgtctacaatccacactgctgca
accaaacaggccatcagcatcttcatcaacgcatccttcaacgatgaggaccagaaacat
cagctacagctcatgagcagcatggataaagagtatgtggcggcctgtaagaacaacgtt
aaagtgtctcggaaggagtgctggtcggtcatccctcgtacttttgcctctctggaggcg
ggcctgaaagacggctcctacatgagatctgggggctacggagaattccgtcgtgccctt
gacagcggtgctcgactctacagatcagagaaacgcaaaggagttatgggtgaggaggta
ttgaccgagtatctggagcagaagaacgtagctggggagggcatccgtagagcagacatc
tctctaactgaagctcaaaagaagatggaagagaacaaggtgaagcagcaggaggctgag
cagcagaggagactcctggagcagcgaacgcagatgcagcagcaggccctccgcgacctc
aagagcagcaatgaggagaacatccgtcagctggaggccaaggtggagcgggagagagag
agatccctgaacgagatggagcgggtgctggcagctaagctgaaggagcagcgggagctg
ctggagcatggctttaggagacgcgctgaggacatggaggacgacatcagaaagctgaag
aaggagcagaagagggaacaggaggagaagccgggcttcttccagaagctgggctccggt
tttagctcaataggaagtgcattatttggctggatgttttag
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