KEGG   Sardina pilchardus (sardine): 134067304
Entry
134067304         CDS       T10667                                 
Symbol
wdr43
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
spil  Sardina pilchardus (sardine)
Pathway
spil03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:spil00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    134067304 (wdr43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spil03009]
    134067304 (wdr43)
Ribosome biogenesis [BR:spil03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    134067304 (wdr43)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 Beta-prop_THOC3 WD40_CDC20-Fz WD40_Prp19 Utp12 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_EML_2 WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd DSE1_N WDR90_beta-prop_4th WD40_Gbeta Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_VPS8 Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_DCAF4 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_HPS5 ASA1 Beta-prop_WDR75_1st Beta-prop_ACSF4 Beta-prop_WDR41 WD40_2 WD40_MABP1-WDR62_1st Beta-prop_NOL10_N Beta-prop_RSE1_2nd Beta-prop_SCAP Beta-prop_WDR75_2nd Beta-prop_RIG_1st Beta-prop_IP5PC_F eIF2A UTP15_C Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 134067304
NCBI-ProteinID: XP_062378475
LinkDB
Position
20:13978005..13989595
AA seq 646 aa
MRLPEYADVRSASIMAADGGFSSPMLPCVFSPKSHQYLALCAQDGRLRIWNTDSKTLHQE
YVPSAHLSATCTCIAWGPCRTAKEGPLRKKRKSEAGQPAETDLLALGTAAGTILIYSTVK
GALQCTLDGGHSGAVNTVQWHPEENLLYSGSDDAHIVEWDLQTAKMRCKWKADRTAVTSL
CVSPNGKLLLSAGMTIKMWDLETKEVYRKFTGHSTMVTTLCFATTRPPDSDGMYFLSGAA
HDRLLSVWQVRSDGKDKNAVVSFTLTDEPQHIDLLKSDSKEEAVRLAVVCKDGQLHLFEH
FLNGPCKKPLSPACSVQVSSAGGKSGEDDTPVPVPLLAASLNSDKQSLQLAYGSYLQPVI
ETTPVNTAERHVCLVRDIQTTLSLSIDTAVSMVKTPIVNEKKSKVLIPGLPGHQAPPKTA
NQSSQPEKRKKGARTEMTIEERLEQVELSAAGKGGEKGISTLRTDSYAVLLVQGLESKDK
SILNRIFQTRKEMLIRNTVSRVPLPAILPLLDELSIRIQGHPNSAHTAVDWLKAVLTLHT
SYLSSLPDLMFQLGRLYHLIESRVKGYQQLMRLHGKLYLLMTQVATSSSVHKINELDHTA
KLVYEEESSDEDEASGDEGLPEDESENWEEDEDDDDGHNGEETESC
NT seq 1941 nt   +upstreamnt  +downstreamnt
atgcgtcttccagaatacgcagacgtacgcagcgcttcaataatggcggctgatggaggg
ttttcgtcgccgatgctaccctgcgttttctccccaaaatcacatcaatacctggcactg
tgtgcacaggatggtcgacttcgtatttggaacacagacagcaaaacccttcaccaggaa
tatgtgccttctgcccacttgagtgccacttgtacctgcatagcttggggaccatgccga
acggctaaggagggacctctgaggaaaaagaggaaatcggaggcaggacagccagcggag
acagatctgctggcactgggtacggcagcaggcaccatcctcatctacagcacagtcaaa
ggggccctgcagtgcacattggatgggggtcatagtggggcagtgaacactgtgcagtgg
catccagaggagaatctgctctacagcggctcagatgacgcacacattgtggagtgggac
ctgcagacagccaaaatgcgctgtaaatggaaagcagatcggacagcagtgacaagtttg
tgtgtgagtccgaatggaaagctgcttctctctgctggcatgacgatcaaaatgtgggac
ttggaaaccaaggaggtgtacaggaaattcacaggtcactccaccatggttacgaccctg
tgcttcgccaccacacggccaccggatagcgatggcatgtacttcctctctggggcagct
catgatcgcctccttagtgtatggcaggtgcgctccgatgggaaggacaagaacgccgtg
gtgtccttcactctgacggacgagccacagcacattgaccttctcaaatccgacagcaag
gaagaggctgtgcggttagctgtggtatgcaaggatggacaactacatctatttgagcac
tttctcaatgggccctgtaagaagcccctctccccagcctgctcagtgcaggtgtccagt
gctgggggtaaatctggtgaagatgacacaccagttcccgtgcccctgttggctgcatcc
ctcaactccgacaagcagagcctgcagctggcatatggcagctaccttcagcccgtcatt
gaaacaacgcctgtgaacacagccgaaagacacgtatgtctagtccgggacatacagaca
acattgtccctctccatagatacagccgtctccatggtgaaaactccaatagtcaatgag
aaaaaaagtaaagtcctaattcctggcctgccaggacaccaggcaccaccgaaaacagcc
aatcaaagcagccaaccagaaaaaaggaagaaaggtgccaggactgagatgaccatcgag
gagcggctggagcaggtggagctatccgctgcaggaaagggaggcgagaaagggatctcc
acccttcggacagacagctacgctgtgctgctggtgcaggggctggagagtaaagacaaa
agcatcctcaatagaatattccagactcgtaaggaaatgttgatcaggaatacggtttcc
cgagtaccccttcctgctatcttgccattattggatgagctttcgattaggatacaagga
catccaaactctgctcacacggcggttgattggctcaaggcagtattgacgctacacaca
tcctatctgtcatcattaccagatttgatgtttcaacttggaaggctgtatcatttaatt
gagagcagagtgaaggggtaccaacagctgatgaggctccatggcaaactatacttgtta
atgacccaggtggcgacaagcagcagtgtccataaaataaatgagctggaccacacagcc
aagcttgtgtatgaggaagagtcctctgatgaagacgaggcttcaggagatgaaggactg
cctgaggatgaatcagagaactgggaggaggatgaagatgatgacgatggacacaatgga
gaagagacagaatcatgctga

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