Sardina pilchardus (sardine): 134067304
Help
Entry
134067304 CDS
T10667
Symbol
wdr43
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
134067304 (wdr43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spil03009
]
134067304 (wdr43)
Ribosome biogenesis [BR:
spil03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
134067304 (wdr43)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
Utp12
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_EML_2
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
DSE1_N
WDR90_beta-prop_4th
WD40_Gbeta
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_Aladin
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_HPS5
ASA1
Beta-prop_WDR75_1st
Beta-prop_ACSF4
Beta-prop_WDR41
WD40_2
WD40_MABP1-WDR62_1st
Beta-prop_NOL10_N
Beta-prop_RSE1_2nd
Beta-prop_SCAP
Beta-prop_WDR75_2nd
Beta-prop_RIG_1st
Beta-prop_IP5PC_F
eIF2A
UTP15_C
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
134067304
NCBI-ProteinID:
XP_062378475
LinkDB
All DBs
Position
20:13978005..13989595
Genome browser
AA seq
646 aa
AA seq
DB search
MRLPEYADVRSASIMAADGGFSSPMLPCVFSPKSHQYLALCAQDGRLRIWNTDSKTLHQE
YVPSAHLSATCTCIAWGPCRTAKEGPLRKKRKSEAGQPAETDLLALGTAAGTILIYSTVK
GALQCTLDGGHSGAVNTVQWHPEENLLYSGSDDAHIVEWDLQTAKMRCKWKADRTAVTSL
CVSPNGKLLLSAGMTIKMWDLETKEVYRKFTGHSTMVTTLCFATTRPPDSDGMYFLSGAA
HDRLLSVWQVRSDGKDKNAVVSFTLTDEPQHIDLLKSDSKEEAVRLAVVCKDGQLHLFEH
FLNGPCKKPLSPACSVQVSSAGGKSGEDDTPVPVPLLAASLNSDKQSLQLAYGSYLQPVI
ETTPVNTAERHVCLVRDIQTTLSLSIDTAVSMVKTPIVNEKKSKVLIPGLPGHQAPPKTA
NQSSQPEKRKKGARTEMTIEERLEQVELSAAGKGGEKGISTLRTDSYAVLLVQGLESKDK
SILNRIFQTRKEMLIRNTVSRVPLPAILPLLDELSIRIQGHPNSAHTAVDWLKAVLTLHT
SYLSSLPDLMFQLGRLYHLIESRVKGYQQLMRLHGKLYLLMTQVATSSSVHKINELDHTA
KLVYEEESSDEDEASGDEGLPEDESENWEEDEDDDDGHNGEETESC
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttccagaatacgcagacgtacgcagcgcttcaataatggcggctgatggaggg
ttttcgtcgccgatgctaccctgcgttttctccccaaaatcacatcaatacctggcactg
tgtgcacaggatggtcgacttcgtatttggaacacagacagcaaaacccttcaccaggaa
tatgtgccttctgcccacttgagtgccacttgtacctgcatagcttggggaccatgccga
acggctaaggagggacctctgaggaaaaagaggaaatcggaggcaggacagccagcggag
acagatctgctggcactgggtacggcagcaggcaccatcctcatctacagcacagtcaaa
ggggccctgcagtgcacattggatgggggtcatagtggggcagtgaacactgtgcagtgg
catccagaggagaatctgctctacagcggctcagatgacgcacacattgtggagtgggac
ctgcagacagccaaaatgcgctgtaaatggaaagcagatcggacagcagtgacaagtttg
tgtgtgagtccgaatggaaagctgcttctctctgctggcatgacgatcaaaatgtgggac
ttggaaaccaaggaggtgtacaggaaattcacaggtcactccaccatggttacgaccctg
tgcttcgccaccacacggccaccggatagcgatggcatgtacttcctctctggggcagct
catgatcgcctccttagtgtatggcaggtgcgctccgatgggaaggacaagaacgccgtg
gtgtccttcactctgacggacgagccacagcacattgaccttctcaaatccgacagcaag
gaagaggctgtgcggttagctgtggtatgcaaggatggacaactacatctatttgagcac
tttctcaatgggccctgtaagaagcccctctccccagcctgctcagtgcaggtgtccagt
gctgggggtaaatctggtgaagatgacacaccagttcccgtgcccctgttggctgcatcc
ctcaactccgacaagcagagcctgcagctggcatatggcagctaccttcagcccgtcatt
gaaacaacgcctgtgaacacagccgaaagacacgtatgtctagtccgggacatacagaca
acattgtccctctccatagatacagccgtctccatggtgaaaactccaatagtcaatgag
aaaaaaagtaaagtcctaattcctggcctgccaggacaccaggcaccaccgaaaacagcc
aatcaaagcagccaaccagaaaaaaggaagaaaggtgccaggactgagatgaccatcgag
gagcggctggagcaggtggagctatccgctgcaggaaagggaggcgagaaagggatctcc
acccttcggacagacagctacgctgtgctgctggtgcaggggctggagagtaaagacaaa
agcatcctcaatagaatattccagactcgtaaggaaatgttgatcaggaatacggtttcc
cgagtaccccttcctgctatcttgccattattggatgagctttcgattaggatacaagga
catccaaactctgctcacacggcggttgattggctcaaggcagtattgacgctacacaca
tcctatctgtcatcattaccagatttgatgtttcaacttggaaggctgtatcatttaatt
gagagcagagtgaaggggtaccaacagctgatgaggctccatggcaaactatacttgtta
atgacccaggtggcgacaagcagcagtgtccataaaataaatgagctggaccacacagcc
aagcttgtgtatgaggaagagtcctctgatgaagacgaggcttcaggagatgaaggactg
cctgaggatgaatcagagaactgggaggaggatgaagatgatgacgatggacacaatgga
gaagagacagaatcatgctga
DBGET
integrated database retrieval system