Sardina pilchardus (sardine): 134067366
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Entry
134067366 CDS
T10667
Symbol
irf2bpl
Name
(RefSeq) probable E3 ubiquitin-protein ligase IRF2BPL
KO
K22383
interferon regulatory factor 2-binding protein
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spil03000
]
134067366 (irf2bpl)
04121 Ubiquitin system [BR:
spil04121
]
134067366 (irf2bpl)
Transcription factors [BR:
spil03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
134067366 (irf2bpl)
Ubiquitin system [BR:
spil04121
]
Ubiquitin ligases (E3)
Atypical E3
134067366 (irf2bpl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
DUF7623
Motif
Other DBs
NCBI-GeneID:
134067366
NCBI-ProteinID:
XP_062378612
LinkDB
All DBs
Position
20:complement(4689781..4692873)
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AA seq
667 aa
AA seq
DB search
MSSAQVSSSRRQSCYLCDLPRMPWAMIWDFTEPVCRGCVNYEGADRIEFVIETARHLKRA
HGFQEGRSPGPAPPPTVKTQAAMSAKETVQLNHVDGSSKQQAGLDRYSLSTERSRFDYSS
ISTHAGRLPNGLSGPNGFPKQDDGPPELNRQSPNSRRNHGLVAVPSQMNVPPNLLPQTML
NGPPSAAAIAQHNLASRAPPPSSIGTALSMASQSMSEQGRRPGSVSSTDQERDLKEKQRN
AESLAELSESLRNRAEEWANKPKIVRETLITLSNSTPFDVRFKKDHSLLGRVFAFDAVSK
PGMDYELKIFIEYPTGSGNVFSSASGVAKQMYQDCMKDFGRGLSSGFKYLEYEKKHGSGD
WRLLGDLLPESVRFFKESLGAEMLPQPYIDASCPLLPSALVNIPRALPSASAPRTGMRKR
KASPEPDSAEGALKLNDEQQRQQWMASQSEAMKLTMASGSFTASHGGPPPLGPGHSVHSS
RATPPESAPQNGQSPMAALMSVADTLGNAHSPKDNNSVHSTTSTRHNSSSPVSPASVSGQ
RRLASRNGDINLAGAPSQSSAHPGMEQVHPQNIPDSPMANNGPLCCTICHERLEDTHFVQ
CPSVPNHKFCFPCSRESIKAQGATGEVYCPSGEKCPLVGSNVPWAFMQGEIATILAGDVK
VKKERDP
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgcacaagtctcctcgtcgaggaggcagtcttgttatctgtgtgatttgccc
cgcatgccgtgggctatgatttgggattttacggagccggtctgcagaggttgcgtaaat
tatgaaggtgctgatcggatcgagtttgttattgagacagcgcggcatctcaagcgagct
catggcttccaggaggggagatccccgggaccagcgccaccgcctacggtgaagactcaa
gcggctatgtcagctaaggaaacggtgcagctgaaccatgtggacggctcttctaaacag
caagcagggcttgatcgctattctctgagtacagagaggtcccgtttcgactactccagc
ataagcacccatgctggacggctcccgaacgggctgagtggacctaatggctttccaaaa
caagacgacggaccacctgaactaaacaggcagagcccgaactcgcgtcggaaccatggg
cttgtggcggtccccagtcagatgaatgtgcctcccaaccttctcccgcagaccatgctg
aacggccccccttcagctgcagccatagcccagcacaacctggccagcagagccccaccg
ccgtccagcattgggaccgcgctgtccatggcgtcccagtccatgtcggaacaaggtagg
agacccggctccgtttccagtacggaccaagagagggacctgaaggagaagcagcgcaac
gccgagtctctggcggaacttagtgaaagtttgaggaacagagccgaagaatgggccaac
aaacctaagatcgtgcgagagactttgatcacactctcaaacagcaccccttttgatgtg
aggttcaaaaaggatcactcgctcctgggcagggtgtttgctttcgatgctgtttccaaa
cctgggatggactatgagctaaaaatattcattgaataccccactggatctggtaacgtg
ttttcaagtgcgtcaggagtcgccaaacaaatgtaccaggactgcatgaaagacttcggc
agggggttatcctcgggctttaagtacctggagtatgagaaaaagcatggctctggtgac
tggcgacttctgggcgatttgttgccggagtcggtgcgttttttcaaagagagtttgggt
gcggaaatgttgccacagccctacattgatgctagctgcccgctgttaccctctgcactg
gtaaacatcccccgtgccttgccatcagcaagtgcgcccaggacaggcatgcgtaagcgc
aaagcctccccagaacccgactctgccgagggagctctgaaattaaacgacgagcagcag
aggcaacagtggatggctagccaaagcgaagctatgaaactgaccatggcatcaggatca
ttcactgcctcgcacggcggaccaccacctctcggaccggggcattcagtacactcaagt
cgagccacaccgcccgagtccgctccccagaacggacagtcgcccatggctgcgctcatg
tcggtcgctgacactttaggtaacgcacactctccaaaggacaacaactctgttcattcc
actacgtctactagacacaacagtagtagcccagtgtctcccgcctctgtgtcaggacaa
cgtcgcctggcatcccgcaatggggacattaatttggccggagcgccctctcaatccagt
gcccatccaggcatggaacaggtccaccctcaaaacattccagattcacccatggcaaat
aacggaccactgtgttgtaccatttgtcacgaacgtttagaagatacacactttgttcag
tgtccgtccgtccctaaccataaattctgtttcccttgctcgcgagagagcatcaaagca
cagggagcaactggcgaggtgtattgccctagtggagaaaaatgccccctggtaggttca
aatgtgccttgggctttcatgcaaggtgagatagcaaccattttagccggggacgtgaag
gtaaaaaaagaaagagatccttag
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integrated database retrieval system
