Sardina pilchardus (sardine): 134067451
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Entry
134067451 CDS
T10667
Name
(RefSeq) 5'-3' exonuclease PLD4
KO
K16860
phospholipase D3/4 [EC:
3.1.4.4
]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil00564
Glycerophospholipid metabolism
spil00565
Ether lipid metabolism
spil01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
134067451
00565 Ether lipid metabolism
134067451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134067451
Enzymes [BR:
spil01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
134067451
Membrane trafficking [BR:
spil04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
134067451
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PLDc_3
PLDc_2
PLDc
DUF7436
Motif
Other DBs
NCBI-GeneID:
134067451
NCBI-ProteinID:
XP_062378715
LinkDB
All DBs
Position
20:complement(17380393..17385178)
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AA seq
502 aa
AA seq
DB search
MSRTASDSTLGLCSNYERFDDVYIPKQQCSFRVVYVAVSVGCLVGFAALLCFSIIEKLNS
EEQFTQRTEEVGNKAAILNEAQETSEQSRIELVEGIPLDMDYGPNATFGAPLYKTWKSLL
SMATKQVQVASFYWTLTGEDIHVNTSTDAPGRDILKAFKALPSRNVSVHVVASFTCVAKN
STDLKELEESGVHVRRVNFRHLTHGVLHSKFWIIDRRHIYIGSPNMDWRSLTQVKELGVV
IYDCPKLAHDLIKIFDSYWMMGHKNASIPEPWPTTFETSINHERPLLLNLSGVPSSVYIA
ASPPSFCPESRSRDLDAILSAINEAEHFVDVAVMDYYPTTQFTWPPRYWPTIDNALREAA
FGRHVAVRLLASCGRDTNPAMLPFLQSLKDMHYPRRYISVEVKAFIVPVGNQSRIPYTRV
NHNKYMVTDKVAYIGTSNWSEEYFSTTAGVGLVISSEAQNQSSSAGSFQQQLRAAFLRDW
DSPFAVPLNELHKHPDCRMSEA
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaactgcctcagactctacacttggattgtgctccaattatgagaggtttgat
gatgtttacatccctaaacaacagtgttcttttagggtggtatatgtggccgtgtcagtg
ggttgtctggtggggtttgcagccttgctgtgcttctctataattgaaaagctcaacagt
gaggaacaattcacccaaaggacagaagaggttggtaataaagcagccattctaaatgag
gcacaggagacctctgagcagagtaggattgagcttgtagaaggcattccacttgatatg
gactacggcccaaatgccactttcggagctccgctctacaaaacatggaaaagcctgctc
tccatggcaaccaaacaagtgcaggtggcctctttctattggactcttactggtgaggac
attcacgtgaacacgtccaccgacgctcctggccgagatatactgaaggcttttaaagcc
ctgccatcaagaaatgtgtctgttcatgttgtggccagtttcacctgtgtggcaaaaaac
tcaactgatctaaaggaactggaggaaagtggtgtccacgtacggagagttaatttccgg
catctgacccacggagtgctacacagtaaattctggattattgatagaagacacatatat
attggaagtcccaacatggactggaggtccctcacacaggttaaagaacttggagtggtc
atctatgactgccccaaactggcccacgacctcattaagatcttcgactcctactggatg
atgggccacaagaacgcctctatcccagagccttggccaacgacctttgagacctctatt
aatcatgagcgccccctgctgctcaacctcagtggagtacccagctcagtctacattgca
gcatcccctccctccttctgcccagagtctcgctccagagacttggatgccatcttgtcg
gccattaatgaggcagagcattttgttgatgtggcagtcatggactactaccccaccact
cagttcacatggccaccgaggtactggccaacaattgacaatgcgttgagggaggcagca
tttggacgtcacgtggctgtgcgtctcctggccagctgtggcagggacacaaacccagcc
atgctccccttccttcagtcactgaaggacatgcattaccctcggcgttacatcagtgtg
gaagtgaaagcctttattgtgcctgttgggaatcaatcccgtattccatacactagagtt
aaccacaacaagtacatggtgacagacaaggtggcatatattgggacgtccaactggtca
gaagagtacttcagcaccactgctggtgtggggttggtgatctcctccgaggcccagaac
cagagctcctcagcgggctcgttccaacagcagctcagggccgcgttcctccgggactgg
gattcaccgttcgctgtgcctctgaatgaactgcacaaacaccctgattgcaggatgtct
gaggcctag
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