Sardina pilchardus (sardine): 134067789
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Entry
134067789 CDS
T10667
Symbol
stxbp5b
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134067789 (stxbp5b)
Membrane trafficking [BR:
spil04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
134067789 (stxbp5b)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
134067789 (stxbp5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_HPS5
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Lgl_C
Beta-prop_VPS8
EIF3I
Beta-prop_NUP159_NUP214
Synaptobrevin
WD40_like
Motif
Other DBs
NCBI-GeneID:
134067789
NCBI-ProteinID:
XP_062379212
LinkDB
All DBs
Position
20:10731060..10768959
Genome browser
AA seq
1196 aa
AA seq
DB search
MKKFNIRKVLDGLTNVSSSSSASPQPGNRENDTILENLQSENFQLCKTVRHGFPYQPSAM
AFDAVQKILAIGTQSGALRLFGRAGVECYCQHEPASAVIALQFLINEGALVSALADDSIH
LWNLRQKLPAVLHSLKFNRERITFLHLPFQSKWLYVGTERGNIHMVNVESFTLSGYVIMW
NKAIELSSKSHPGPVVHISDNPMDEGKLLIGFECGIVVLWDLRTKKADYRYSYDEAIHSV
AWHHEGKQFVCSHSDGTLTIWNIRVPAKPAQIITPHGKHPKDGKKPEPCKPILKVEYKTT
RVGDPFMVLSGGLSYDTVGRRACLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEPY
AVVILLEKDLVVIDLAQIGYPIFETPYPLTLHESPVTCCEYFADCPAELIPALYSVGSRQ
KRQGYSKKEWPISGGNWGQGTQSYPEIIITGHADGSIKFWDASAIMLQVLYKLKTAKVFE
KARNKEDKPSTDIVDEDPFAIQILTWCPESRMLCVAGVSAHVIIYRFSKQEVTTEVVQLL
EVRMPYELNDVESPEAAGEQTPAVSTPGASSSPQSALPPAQTHPSTSSNSSDGPRDNVPC
LKVRCSPLKQSPGYQVDLVVQLLWVSGEPPQQITSLALNSAYGLVVFGNFNGLAVVDYFQ
KTLLMNVGVQELYGLADPFQRQPRSPRKARQPSGGVCDVNDGSNASEDRCKSPTSGSGSP
CNSDEENKHQKFIDKMKQKSRRFSKTVANDLAKMSRKLVTVPDQKQETAVAERIHRRRSL
QPKKRVCGVRSATQANWNRGGSSMVRTPSAPDLYAKDSSFSRSRSSSVTSLEREAREIIS
SFHFSETLSRKGEAAPGPSLWVGTSQGSMLVLPLTVPAGSEQRMQQAPAVSFGGVVTRLK
GGVLSMATLDSAGAPLLPPYELWYDPNLPDEREEKDRWKRRRPASPPAGSQEGAPDTHYV
VLCSEKQAEVIALPAQASVFKHNITEASFVLRADVVQMTTGCCIACFCANGHIMALSLPS
LRPLLDVNYLPLTDMRIARTFCFSNLGQALYLTSPTEMQRLTYSQETCDNLQEMLCELFT
PVETPEAPNRGFFKGLFGGGAQSLDREDLFGETAAGKASRSLAQHIPGPGGMEGMKGAAS
GIVGDLARTRMALDERGQKLGELEERTAAMMSSADSFSKHAHDMMLKYKDKKWYQL
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaatatcagaaaggtgctagatggtttgacgaacgtgtcatcctcctcc
tccgcatcacctcaaccgggaaacagggaaaatgacacaattctggagaacctgcagtcg
gagaatttccagctctgcaagactgtgcgccatgggttcccctatcagccctcagcaatg
gcttttgacgctgtacagaaaatcctcgccatagggactcagagtggagctttgagattg
tttgggcgagcaggtgtggagtgttactgccaacatgagcccgcctctgccgtcatcgcg
ctacagttcctcatcaacgagggggcgctagtgagcgcgctggccgacgacagtatccac
ttatggaacctgaggcagaagctgccggcggtgctgcactcgctcaagttcaacagggaa
aggatcacgtttctccacctgcccttccagagcaagtggctgtacgtgggcacggaacgg
gggaacatccacatggtgaacgtggagtccttcactctctcaggctacgtcatcatgtgg
aataaagccattgaactgtcctcgaagtcacaccccggcccagtggtacacatcagtgac
aaccctatggatgagggcaagctgctgataggctttgagtgtggcatcgttgtgttgtgg
gacctgaggaccaagaaagcagactaccgctacagctacgacgaggccattcactcggtc
gcctggcaccacgagggcaagcagttcgtctgcagccattcagacggcaccctgaccatc
tggaacatccgcgtgcctgccaaacctgcccagatcatcacgccccacggtaagcatcct
aaggatggcaagaagccggagccgtgtaagcccattctgaaggtggagtacaagaccacc
agagtaggggaccccttcatggtgctgtcggggggcctgtcctatgacacggtgggcaga
cgggcctgtctgacggtgatgcacgggaagagcacggccgtgctggagatggactacccc
atcgtggacttcctcacgctgtgtgaaacgccctatcccaatgatttccaggagccctat
gctgtggtcatcctgctggagaaagacttggtggtgatcgacctggcgcaaatcgggtac
cccatctttgagaccccgtaccccctgaccctgcacgagtctccggtgacatgctgcgag
tactttgccgactgcccagcagagctgatcccggccctctactccgtgggctcccggcag
aagagacagggctacagtaaaaaggaatggcccataagtggtggcaactgggggcagggg
acacagagctacccagaaatcatcatcacaggacatgctgatgggtccatcaagttctgg
gacgcctcagcaattatgctgcaggtgctgtacaagctgaagacggctaaagtgtttgag
aaggcgcgcaacaaggaggacaagcccagcacggacatcgtggacgaggacccgttcgcc
atccagatcctgacctggtgcccggagagtcgcatgctgtgtgtggcaggagtctctgcc
cacgtcatcatataccgcttcagcaagcaggaggtcaccactgaagtagtgcagctcctg
gaggtgcgtatgccgtacgagctgaacgacgtggaatctccggaggcggcgggagagcag
acgccggccgtgtccacgccgggggcctcgtccagcccccagtcggcgctgccccccgcg
cagacgcacccgtccaccagcagcaactcgtccgacggaccccgagacaacgtgccctgc
ctcaaggtgcgctgttcccctctcaagcagtctccaggctaccaggtggacctggtggtg
cagctgctgtgggtcagcggggagcccccccaacagatcaccagcctcgccctcaactct
gcatatggcctggtcgttttcggtaacttcaacgggctggccgtggtggactacttccag
aagaccctcctgatgaacgtgggtgtccaggagctgtacggcttggctgaccccttccag
aggcagccgcgctccccgcgcaaggcccgccagccgtcaggaggtgtctgtgatgttaac
gacggctccaatgcctccgaggaccgctgcaaatcccccacctcaggctctggctctcca
tgcaattctgacgaggagaacaaacaccaaaagttcatagataagatgaagcagaaaagc
aggcgcttttccaagacggtagccaatgacttagcgaagatgtcacggaaactagtcacg
gtccctgatcagaaacaggaaactgcagtagccgagcgcattcatagacggcgctctctt
cagcccaagaagcgtgtgtgtggtgtaagatcggccacccaggccaactggaaccggggc
gggagctccatggtgcggaccccatcggcccccgacctctatgcaaaggacagctccttc
agccgctcgcgcagctccagcgtgacgagcctggagcgggaggcgcgcgagatcatctcc
tccttccacttcagcgagacgctgagccgcaagggcgaggcggcgccggggcccagcctg
tgggtgggcacctcgcagggcagcatgctggtgctgcccctcaccgtgcccgccggcagc
gagcagcgcatgcagcaggcgcccgccgtctcctttggaggtgtggtgacgcgcctgaag
ggcggcgtgctctccatggccacgctggactcggcgggcgcgcccctgctgccgccgtac
gagctgtggtacgaccccaacctgccggacgagcgcgaggagaaggaccgctggaagcgg
cgccggccggcctcgcctcccgcgggcagccaggagggggcgccggacacccactacgtg
gtgctgtgctcggagaagcaggccgaggtgatcgcgctgcccgcccaggccagcgtgttc
aaacacaacatcaccgaggcctcgttcgtgctgcgcgccgacgtggtacagatgaccacc
ggctgctgcatcgcctgcttctgtgccaacgggcacatcatggcactcagtctgccgagt
ttgcggcctctgttggatgtgaactacctgcccctgacagacatgcgcatcgccagaacc
ttctgcttctccaacctgggccaggccctgtacctcacctcccccacagagatgcagcgc
ctcacctacagccaggagacctgcgacaacctgcaggagatgctgtgtgagctcttcact
cccgtggagactccagaggcgcccaacagaggcttcttcaagggtctgtttggaggagga
gctcagtctctggacagagaggacctgttcggggagacagcggctggcaaggcctcccgg
agcctggcgcagcacatcccggggcccgggggcatggagggcatgaagggggcagcgtcg
ggtatcgtgggcgatctggcgcgcacccgcatggcgctggacgagagagggcagaaactg
ggcgagctggaggagcggacggccgccatgatgtccagcgccgactccttctccaaacac
gcccacgacatgatgttgaagtacaaagataagaagtggtaccagctctga
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