Sardina pilchardus (sardine): 134067931
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Entry
134067931 CDS
T10667
Symbol
lingo2b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134067931 (lingo2b)
Membrane trafficking [BR:
spil04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
134067931 (lingo2b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_5
LRR_9
V-set
LRR_Zer-1
Ig_C17orf99
LRR_R13L1-DRL21
C2-set_2
Big_6
LRR_RPS2
C2-set_3
Motif
Other DBs
NCBI-GeneID:
134067931
NCBI-ProteinID:
XP_062379404
LinkDB
All DBs
Position
20:complement(7119010..7132994)
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AA seq
660 aa
AA seq
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MVLSLASCVSVRSSSSSSSSLLLLSRLLPSLLLLAALLACPGPAGGCPARCECSVPTRSV
SCHRRRMLTVPEGVPIETRLLDLSKNRLRSLAPQNFSQLQQLEDLDLSANLLASVEPGSF
RAQPRLRTLILRGNQLTLLPRGALAGLGELRALDLSQNKLVILLDGAFEEQRRLETLELS
DNELVFVAPRAFAGLLSLRQLALERCNLSEVPGQALAQLRALETLRLSQLANVAEVPPHA
FRNMPRLRHLTLERLPLLEALPSPAFLGLNLTTLAVTQTNLSAVPALGHLRHLALLNLSH
SRVRVLRAGGLRGLARLEELHLRSAALERVEPDAFLGAPSLRLLDVSSNRLATLERSAFP
EGHDLSLRALRIGRNPLVCDCRLRWLLQRAPPLLHAPATTDKRNPATTTPDDAPPECAAP
ASLAAKTLREVWSDAQLARLVVCTKPRVIAVATQPVQVEEGQRAWLNCSADGAPPPTVSW
VTPSRRHLTTKSTGRVVVHADGSLEVRVAERQDSGVYVCVASNPAGNASLSASLAVKSLP
ARDRALLANRSLHYDYQDADYHGNGGGAAHNASLHGNGTDRYARVRVALDFTTILVSTAM
GCLSFLGVVLFCFLLLFAWSRGKGKHRGSVDIQYVPRKRKAGGNELPETSGPRRVNMKMI
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggtgctctctctggcctcctgtgtttcggttcgctcctcctcctcctcctcctcctcc
ctcctcctcctctcccgcctcctgccgtcgctccttctcctggccgccctcctcgcgtgc
ccgggcccggcgggcggctgccccgcccgctgtgagtgctcggtgcccacgcgctcggtc
tcgtgccaccgccggcgcatgctcaccgtgcccgagggcgtgcccatcgagacgcggctg
ctggacctgagcaagaaccgcctgcggagcctggcgccgcagaacttctcccagctgcag
cagctggaggacctggacctgagcgccaacctgctggcctcggtggagcccggaagcttc
cgcgcccagccgcgcctgcgcacgctgatcctgcgcggcaaccagctgaccctgctgccg
cgcggcgcgctggccggcctgggcgagctgcgcgcgctggacctgagccagaacaagctg
gtcatcctgctggacggcgccttcgaggagcagcggcggctggagacgctggagctgagc
gacaacgagctggtgttcgtggcgccgcgggccttcgccggcctgctctcgctgcggcag
ctggcgctggagcgctgcaacctgtcggaggtgcccggccaggcgctggcgcagctgcgc
gccctggagacgctgcggctgagccagctggccaacgtggccgaggtgccgccgcacgcc
ttccggaacatgccgcgcctgcgccacctgacgctggagcgcctgccgctgctggaggcg
ctgcccagcccggcgttcctcgggctcaacctcaccacgctggccgtcacgcagaccaac
ctgtcggcggtgcccgcgctgggccacctgcgccacctggcgctcctcaacctctcccac
agccgggtgcgggtgctgcgggcgggggggctccgcgggctcgccaggctggaggagctg
cacctgcgctcggccgcgctcgagcgcgtggagcccgacgccttcctgggcgcgccgtcg
ctccggctgctggacgtctcgtccaaccggctggccacgctggagcgctcggcgttcccc
gagggccacgacctgagcctgcgggcgctgcgcatcggccgcaacccgctggtgtgcgac
tgccgcctgcgctggctcctgcagagggcgccgccgctcctgcacgccccggcgacgaca
gacaagcggaacccggcgacgacgacgcccgacgacgccccgcccgagtgcgccgccccc
gcctccctggcggccaagaccctgcgcgaggtctggtccgacgcccagctggcgcggctg
gtggtctgcaccaagccgcgggtcatcgccgtggcgacgcagcccgtccaggtggaggag
ggccagcgggcgtggctcaactgcagcgccgacggcgcgccgccgcccaccgtctcctgg
gtgacgcccagccgccgccacctgaccaccaagagcacgggccgcgtggtggtccacgcc
gacggctcgctggaggtgcgcgtggccgagcgccaggacagcggcgtctacgtctgcgtg
gcgtccaacccggcgggcaacgccagcctgtcggcctcgctggccgtcaagagcctgccg
gcgcgcgaccgcgccctgctcgccaaccgcagcctgcactacgactaccaggacgccgac
taccacggcaacggcggcggcgccgcccacaacgcctcgctgcacggcaacggcacggac
cgctacgcccgggtgcgcgtggccctggacttcaccaccatcctggtctccacggcgatg
ggctgcctcagcttcctgggcgtggtcctcttctgcttcctgctgctgttcgcctggagc
cgcggcaagggcaagcaccggggcagcgtggacatccagtacgtgccgcgcaagcgcaag
gccggcggcaacgagctgcccgagaccagcgggccacgacgggtcaacatgaagatgatc
tga
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