Sardina pilchardus (sardine): 134068063
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Entry
134068063 CDS
T10667
Symbol
scaf8
Name
(RefSeq) SR-related and CTD-associated factor 8
KO
K13191
RNA-binding protein 16
Organism
spil Sardina pilchardus (sardine)
Brite
Transcription machinery [BR:
spil03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
134068063 (scaf8)
Spliceosome [BR:
spil03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
134068063 (scaf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134068063
NCBI-ProteinID:
XP_062379552
LinkDB
All DBs
Position
20:complement(19708971..19745636)
Genome browser
AA seq
1488 aa
AA seq
DB search
MEAVKAFNGELYSLNEYKPPISKAKMTQITKSAIKAIKFYKHVVQSVEKFVQKCKPEYKV
PGLYVIDSIVRQSRHQFGQEKDVFAPRFSKNIIGTFQNLYRCPSDDKSKIVRVLNLWQKN
QVFKSDIIQPLLDMAAGLPPPSVTPVTSSSAAPVNSTTPGTPATPATPANIVQSLPDWAA
QISNTDTVAAVAQILQSPQGQQLQQLVQSLQMQQQKPQPSLLQALDAGLVVQLQALTAQL
TAAAAANTLNPLEQRVSSFNKKLLGQFDFGNEAERQEETKKETVQPQLPMVSESINSSIF
HQLAEQLQQQNLEQFQKQLMEHQQHQQQHQQKTMSMESQESLYGPDNSSTPTQGSSQLQL
AETDSKMDDSIDNQQQDMDIDEGQDTMDEEMFETDEKKTSGTRSRSRSRSRSRSPRKRRS
RSRSGSRKRKHRKRSRSRSRDRKRKSSRSYSSERRAREREKERQKKGLPPIRSKFLSVCS
TTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYICMVHRQDAYRARQKLSTGS
FKIGSKVIKIAWALNKGVKQEYKQFWDVDLGVTYIPWEKVKLDDLEGFAEGGMIDQETIN
SDWEAQKNAEAAKETQSQAAAAEASAVTNAQSEAYAQPVTMMPVQIPVAQSAVPAVGLVP
PSFPVTMAMPPPGFGPPPPFLRAGFNASQPPPGFMPPGVAQTTVGTGLQSAAASLVQPSM
SGAHESKDSPYAAMLPQAGFLPQGIPGVYNPLGVQQQQQQQQQQQQQQQHQQHQQQQQQQ
QQQQQQQQHHGGMEKAQQPSEGMDATSAELTLQGMHNAVRSGMGLLGMHPSTALGHQLTG
QRMPGLLPLDLRPNLLQGANARFPLLMQQGLSHQASLLDASLQAQAQAQAQAQAQAQARL
RAPFQQMEAFSRAANPAAAGADKPEEEAAPSRAEGNAQQDGDQDYRFPPPEKKQSTGLLR
TPPPEMREQQQATSRPPLLERPPRPSLLGDGRKEASLAGGFRGESRWGPPRGDFDERDVR
GGAAATGTPKGFQEERPMANFPNRFEMRGGGAAAAAAASVSSSAAGGGGGASGAGSAAGG
PAWNRGGAAFNADIHKDFDDRRRPWERQRDRDEREQDFDFRREMNGNRHSRERDRDRERE
RDRDRERDRDRDRGRDRGGDRNRDRDRERGDREWERDRDRDRDRDREAEREKRDEERKRE
RGRGGGGGGWTPLAPLVQPQAPNQPLLPLPQPQLQLGSGLRPLLPDPRPPLLPDPRPPIL
PEPRPPLLPVPTLQVQSDHKPELKMELKVEPKVEPKPDPKPEVNLEPKLEPMLEPKPELS
PEPSPEPSLEPSAEPSAEPSLEPSPEPSPEPSPEPSPEPKSEPEPEPLPESPPVTSNTEE
EMAEPQTPEASTPCMNGEEADMGPTEDFVPDLATPPPACSLTPSPAQSPSPSPSPSPSPS
PIPDEPPEQGNVPAKLSPPVVDTDSEQSGPKEDAEAEPVLEKTDTEGT
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgttaaagcatttaacggcgagctgtattcgctcaatgaatacaagcctccg
atctccaaagccaagatgacccagatcacaaagtctgcaattaaagctataaagttctac
aagcacgtggtccagagcgttgagaagttcgttcagaagtgtaaaccagaatacaaggtg
ccagggttgtacgtcattgactcaattgtacggcagtcacggcaccagttcggtcaggaa
aaagatgtgtttgcgccacggttcagcaaaaacatcatcggaaccttccagaacctctac
cgatgtccatctgatgacaaaagtaagatcgtcagggtgcttaacttgtggcagaagaac
caagtgttcaaaagtgacatcatccagcctctgctggacatggcggctggtctgccaccc
cccagcgtcacgcccgtcacctccagctctgctgcgcccgtcaacagcactactcctggt
actcctgccactccagcaacccctgctaacatagtgcagagtctaccagactgggccgca
cagatctccaacacagatacggtggctgcagtggctcaaattctacagagccctcagggc
caacagctccagcagctggtgcagagtctgcagatgcagcagcagaagccgcagccgtct
ctcctgcaggcgctggacgcgggccttgtggtgcagctgcaggccctcaccgcccagctc
acggccgccgccgccgccaacacgctcaaccccctggagcagcgggtctcctccttcaac
aagaaactgttggggcagtttgactttgggaatgaagcggagcggcaagaggagaccaag
aaggagacggtgcagcctcaattgcccatggtgtctgagtccatcaacagctccatcttc
catcagttggctgagcagctgcagcagcagaatctggagcagttccagaagcagctgatg
gaacaccagcagcaccagcagcagcatcagcagaagacgatgtcgatggagagtcaagag
tccctttacggcccagataacagctccacgcccacacagggcagcagccaactccagcta
gcggagacggactccaagatggatgactccatagacaaccagcagcaggatatggacata
gatgaggggcaggacactatggacgaggagatgttcgagaccgatgagaagaagaccagt
gggactcgctccaggtcacgttccaggtctcgctccagatctccccgcaaaagacggtca
agatcgcgctccgggtctcggaagcggaaacaccgcaaacgctcccgctcccggtcacga
gaccgcaagaggaagtcctcgcgctcctactccagcgagcggcgcgctcgagagagagaa
aaggaacgacagaagaagggactccctcccatacgctccaaattcctcagtgtgtgcagc
actactctctgggtgggccaagtggacaagaaggccacccagcaggacctcaccaacctg
tttgaggagtttggccaaattgaatccatcaatatgattccccctaggggctgtgcctac
atctgcatggtgcacagacaagacgcctaccgtgctcgccagaagctcagcaccggctcc
ttcaagatcggctccaaggtcatcaagattgcatgggcactcaataagggtgtgaagcag
gagtataaacagttctgggatgtggaccttggcgttacctacatcccttgggaaaaagtc
aagctcgatgacctggaaggctttgctgaaggaggaatgattgatcaagaaaccattaat
agtgactgggaggctcagaagaatgccgaggcggccaaggagacgcagagccaggcggcc
gcagctgaggccagtgccgtcactaacgcccagagcgaggcctacgcccaacctgtcacc
atgatgcctgtacagatccccgtggcacagtctgcggtccctgcagtcggcctggtgccg
ccttcgtttccggttaccatggcgatgcccccacctggcttcggtcctcctccgcctttc
ctgagggcaggattcaacgcctctcagcctccaccaggattcatgcctccaggagttgct
cagaccactgtaggaactggtctccaatcagctgcagcatcgctagtgcagccctccatg
tctggcgcacatgagagtaaggactctccgtacgcagctatgctcccccaggccggcttc
ttacctcagggcatccctggagtatacaaccctttgggagtccagcagcagcagcaacaa
caacaacaacaacaacaacagcaacaacatcaacaacatcaacagcagcagcaacaacaa
caacaacaacaacaacagcagcagcatcacggaggcatggagaaagcacagcagccttca
gagggcatggacgccactagtgcagagctcacgctgcaagggatgcataacgcggtgcgc
agcggcatgggcctgcttggcatgcacccctcgacggctcttggccaccagctcacaggc
cagaggatgcctggcctcctgcccttggatctgcggcccaatctcctccagggtgccaac
gcccgcttcccgctgctcatgcaacaaggcctttcgcaccaagctagcctgctggatgcc
tccctccaggcacaggcacaggcacaggcccaggcccaagcccaggcccaagctcgtctc
cgggcccccttccagcagatggaggccttcagcagggccgctaaccccgcggctgctggc
gcggacaagcctgaggaggaggcggccccgagcagggcggagggcaacgcgcagcaggac
ggagaccaggactaccgcttccccccgccggagaagaagcagagcaccggcctgctgagg
accccgccgcccgagatgcgggagcagcagcaggccacctccagacccccgctcctggag
agacctccgcgaccctcgctgctaggcgacgggcgcaaagaagccagcctggccggaggc
ttccggggcgagagccgctgggggccgcccagaggggactttgacgagcgagacgtacgc
gggggggcggccgcaaccgggaccccgaaaggtttccaggaagaacggccgatggccaac
ttccctaaccgcttcgagatgcgtggtggaggagcagcggcagcagcagcagcctcagtg
tcttcttcagcagcaggaggaggaggtggtgctagtggggcaggatctgcagcaggaggt
cctgcctggaatagaggaggcgcagccttcaacgcagacatccacaaagactttgatgac
aggcggcgaccgtgggaaaggcagagggaccgcgacgagcgcgagcaagactttgacttc
cgaagggagatgaacggcaaccggcacagccgggagcgtgatcgagaccgcgaacgggag
agggaccgggaccgcgagagagaccgagaccgggaccgcggccgggaccgcggcggagat
cgcaaccgtgaccgcgaccgagaacgaggggacagagagtgggagcgagaccgggatcga
gatcgagatcgcgaccgcgaggctgagcgagagaagagggatgaggagaggaagcgagaa
cgcggtcgcggcggcggtggtggtgggtggacccctcttgcccctctggtccagccccaa
gccccaaaccagcctctactacccctgccacagccccagctccagctcgggtctggtcta
cgacccctcctccctgaccccaggcctcctctcctccctgaccctcgtcctcccattctg
cctgagcctcggccacctttgctgcctgtcccgacccttcaagtgcagtcagaccacaag
ccagagctcaaaatggagctcaaagtggagcctaaagtggagcctaaaccagaccccaag
ccagaggttaacctcgagcctaaactggaacccatgttggaacctaaaccagagcttagc
ccagaacctagcccagaacctagccttgagcctagcgcagagcctagcgcagagcctagc
ctagagcctagcccagaacctagcccagagcctagcccagaacctagccctgagcccaaa
tcggagcctgaaccagagcccttacctgaatccccaccagtaaccagcaatactgaggag
gagatggcagaaccacagacccccgaggcttccactccatgtatgaatggcgaagaggcc
gacatggggcccaccgaagattttgtcccagacctcgcaacccccccaccagcttgcagc
ctcacgcccagtcccgcccagtcaccgtcaccatcaccttccccgtcaccttccccctcc
ccgatcccggacgagccccctgaacaagggaacgtcccggctaaactcagcccccccgtg
gtggacactgacagtgaacaaagtgggccgaaggaggacgctgaggcagagccagtgcta
gagaaaacagacactgaggggacataa
DBGET
integrated database retrieval system
