Sardina pilchardus (sardine): 134068383
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Entry
134068383 CDS
T10667
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spil04121
]
134068383 (rlim)
Enzymes [BR:
spil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134068383 (rlim)
Ubiquitin system [BR:
spil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134068383 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
SOBP
zf-RING_5
zf-C3HC4_3
Prok-RING_4
zf-RING_UBOX
zf-RING-like
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
134068383
NCBI-ProteinID:
XP_062379934
LinkDB
All DBs
Position
21:complement(14563186..14571992)
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AA seq
807 aa
AA seq
DB search
MEGSDNAEQGGSDQSDSQRRRQLARLDREEAFYQFVNNLSEEDYRLMRDNNLLGNPGEIT
EEELLTRLQQAKDGGQRAATAASTSPSPSASPSANASANASANTSGSEARSRPEASGDLE
GPEDPSNGDTLLDWLNTVRRTGNTTRSGHRGNQSWRAVSRTNPSSGDFRFSLEININRNL
AEQQTQTEAAEQAAGGAAPPEGPSAVAAAAAAAANATTAATATNGAEVEPGAEAEAEAEA
GAEAESGAEAEPEAVAEAESEPPPEPMELEEEPVVEELAVIVEPELSPPVTRPASPQPIL
VPESVPLPIPIPVPVPIPITIPSPHLQAAAVAVAMAAASASEPPQTRRGVVRPRSRSPEQ
RRTRACTRSRSPLSLDRMDGLPPAPPIPEPPLPPPPPPPHMEGSSRTRQHIPSRHVTVET
TDHHHHHHHHHHHHQATPLAPPTSTTHAPDAPAAPAQEEEPAAGEAGAGRRPPTIMLDLQ
VRRVRPGEYRQRDSIANRTRSRSQPASNNSSSSSSSSSSSSSSSSSSGASSGTGSGSGAG
GAGGAAGNNTFLYETEQGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGLGEATSVALQ
SMIRHIMTGFGELSYFMDSDSDSSDSPRASGPTTPSDGTTASVAGAAAAAAAVAAAATGA
SQAQAGGSQAEERDREGEDADSPAAGGGVAPDGRGRARAPISLEETGSLPFLRLAHFFLL
NDEDEEQPRGLTKEQIDNLSTRNFGESDALKTCSVCITEYAQGHKLRKLPCSHEYHVHCI
DRWLSENSTCPICRRAVLATTNRESVV
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggagggctcggacaatgcagaacaaggtggcagcgatcagtcggattcccaacggaga
cgtcagctggcccgcctggacagggaggaggccttctatcagtttgtcaacaacctcagt
gaagaggactaccgactaatgagggacaacaaccttctgggcaaccccggtgagatcact
gaggaggagctgttgacccgcctgcagcaggcgaaggatggtgggcaacgtgcggccaca
gctgccagcaccagtcccagccccagcgccagccccagtgccaacgcaagtgccaacgca
agtgccaacacaagtggcagtgaagcacgcagcaggcctgaggcctctggtgaccttgag
ggccccgaggatccctctaacggcgacaccctcctggattggctcaacaccgtgcgtcgc
acgggcaacaccacgcgcagcggtcaccgcggcaaccagtcctggcgcgcggtgagccgc
accaacccgagcagcggggacttccgcttcagcctcgagatcaacatcaaccgcaacctg
gcggagcagcagacgcagacggaggcggcggagcaggccgcgggtggtgcggcaccaccg
gaagggcccagcgctgttgctgctgctgccgccgccgccgccaacgccaccaccgccgca
accgccaccaacggagcagaggtcgagcctggggcggaggccgaggccgaggccgaggcc
ggagcggaagccgagtctggagcggaggccgagcccgaagctgttgcagaggcggagtca
gagccccctcctgagcccatggagctggaggaggagccggtcgtggaggagctggcggtg
atcgtggagcccgagctctcgccccctgtgacccggcccgccagcccccagcccatcctg
gtgccggagtccgtgcccttgccgattccgatcccggttcccgtgccgatccccatcacc
atcccctctccgcacttgcaggcggcagccgtggcggtggcgatggcggcggcgtcggcg
tccgagccgccgcagacccggcggggcgtggtgcgtccccgcagccggagccccgagcag
cgccgcacccgcgcctgcacccgcagccgctccccgctcagcctggaccgcatggacggc
ctcccccccgcgccgcccatccccgagcccccgctacccccacctcccccgccgccccac
atggagggcagctcacgcactcgtcagcacatcccctcccgccacgtcacggtggagacg
acggaccatcaccaccatcaccaccaccatcaccaccaccaccaggcaacacccctggct
cccccgacctccaccactcatgcccccgatgcccccgcggctcctgcccaggaggaggag
ccggcggctggggaagccggcgccggacgcaggccccccaccatcatgctggacctgcag
gtgcgtcgggtccggcctggcgagtaccgccagagagacagcattgctaaccgcacccgc
tcgcgctctcagcccgctagcaacaacagcagcagcagtagcagcagcagcagcagcagt
agtagtagtagcagcagcagtggagccagcagcggaacaggaagtggtagcggggcgggc
ggggccggtggcgccgcgggcaacaacaccttcctgtacgagacggagcagggcggcttc
cgtcggacattctcccggtcggaacgggccggcgtgcgcacctacgtgagcacgatccgc
atccccatccggcgcatctccgacgcggggctcggcgaggccacctccgtggcgctgcag
tccatgatccgccacatcatgacgggcttcggcgagctcagctacttcatggactcggac
tcggactcgtccgactcgccccgggccagcgggcccaccacgccctccgacggcaccacg
gcgtctgtagccggagccgctgctgccgcggccgctgtcgccgctgccgccaccggcgct
tcgcaggcccaggccggcggctcgcaggccgaggagcgggacagggagggggaagacgcg
gactccccggcggccggaggcggggtggccccagacggccgcggccgcgcccgggccccc
atcagcctggaggagacgggctcgctgcccttcctgcggctggcgcacttcttcctgctc
aacgacgaggacgaggagcagccgcgcgggctcaccaaggagcagatcgacaacctgtcc
acgcgcaacttcggcgagagcgacgcgctcaagacgtgcagcgtgtgcatcaccgagtac
gcgcagggccacaagctgcgcaagctgccctgctcgcacgagtaccacgtgcactgcatc
gaccgctggctctcggagaactccacctgtcccatctgccggcgcgcggtgctcgccacc
accaaccgcgagagtgtggtctga
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