Sardina pilchardus (sardine): 134068460
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Entry
134068460 CDS
T10667
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX
KO
K10779
transcriptional regulator ATRX
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
134068460 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spil03000
]
134068460 (atrx)
03036 Chromosome and associated proteins [BR:
spil03036
]
134068460 (atrx)
Transcription factors [BR:
spil03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
134068460 (atrx)
Chromosome and associated proteins [BR:
spil03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
134068460 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
134068460
NCBI-ProteinID:
XP_062380077
LinkDB
All DBs
Position
21:complement(14781892..14814473)
Genome browser
AA seq
2105 aa
AA seq
DB search
MTTDIKSIHGSSSKLNTLVTKLHEYMSYSAEEDINEAQTSGNMASTESNTADQIMEEPGS
STETAKPSSSRSKRKPTTVTKHTGLDQSDDSEQQQSEQEEDPSDSNTEMTSLPKGTIVVN
PEPVENESKDDFTGPEFKSRSAKSKGEVQRKPVGNEISLHERVNCTACGQQVNPYQRDSV
LEHPILKVLICKSCYKYYMSDDISKDADGMDEQCRWCAEGGNLICCDYCSNAFCKKCILR
NLGRKELSGIMDESSKWYCFVCSPQPLVDLSSSCNKIMLKLEQLWRREHKPKSGKSERKR
DKAALNGKEHHSESSGTLTFSPKFLQIPKELVKKTKKLIETTTGLNNTFVQFIQQASKDK
GAKPLLRYRHLKAFKSVLADLKMAHATLEEALEVEFRELELQNGAEGTVGHAEVEQQTPA
EAEPTEQAGADEVQNDEAVDGSDAEEDAADFMAADDDVEMKDSPIPSPPEQGNGSEVGEV
DTLREEEEEEDEVKLDGDCGVAEDGNMLDGDSSELDRAILSATPSIPDELFQMVESLADS
TKLAAADEAREAKVADSSASVSSAEESQPIEPDEAGEKSSGAQKRIATLGKKKLVVKLTP
MPLRVSLKTETVSEAKGRVERVSPDDGPKSRRSPRVKTTPLRKPSESKDKGKSNGKQDAD
KRTKVKTTKTSSDQEEGAAAKVSSTQMDSDSDEVPSILAERAAQEASSGDEAASSGKKVK
REGRSNSAARSSERRSTKRKLNLKSTSSESDQESGTKNSTAKRASKRTKTKTAGSESENF
DSDLEKDMKSLGKLGTGKKGVRKVKQESKEIPEKPGKTKKRSFERTRKTRRSKASANQSS
SSSDNEEDKAEDSAEDSDDKQKIRPLMDSVMPGVEAFQQSSGDEGGVKGEPSQMPEDDDD
DPENRIAKKMLLAQIKATYSSGAESSSEHSDSEQEDGKPAKKVKNGSGEENGEDGDSSED
DEDSEEDSDGKKKGRRHRLLRHKLSLSEGESGTEKSAKGGKKEKGKKKSRRKVVSDDSAD
SDFEGSPSSDDDGSALSEEVSESEGEVGNKRKTRSAKKAAKEKEERSYKQKQKKKRRRIK
VQDSSSGKSGEEDEEEGEEGEGDGEGDDDDDDDKGTPKGRKKIRKILKESKLRMETRDAL
KEEEDRRKRIAEREALREKLREVIVLDEASQVIVVDDSSQVACPITTKLVLDEDEETKEP
LVQVHRNMVTKLKPHQVDGVQFIWDCCVESVKKTKKSSGSGCILAHCMGLGKTLQVVTFL
HTMLLCEKLNFTTALVVCPLNTVLNWKNEFEKWQHGFKDEESLEVVELATVKRPQERAYA
MQRWHEDGGVLIIGYEMYRNLTQGRSIKSKKLKETFQKTLVDPGPDFVICDEGHILKNEA
SAISKAMNSVKTRRRVILTGTPLQNNLIEYHCMVNFIKENLLGSVKEFRNRFINPIQNGQ
CADSTPQDVRLMKKRAHILYEMLAGCVQRRDYTALTKFLPPKHEYVLSVRMTSIQAKLYR
HYLDHFTSVGSALEGNRGRAGTKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSME
EFIASDTEESSMSLTSEDEKPKKKKARGKAKKKSSDGSDSDAVEVIKEWNTSSRGGNPES
RNRGEPVEEPKGASSSYSPDWYKDFVTDKDAEILEHSGKVSLLFQILRMAEETDEKVLVF
SQSLISLDLIEDFLELSCRAKDEGKESPYKGEGKWFRNIDYYRLDGSTNAMTRKKWAEEF
NDTNNPRGRLFLISTRAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQHRPVFV
YRFLAQGTMEEKIYDRQVAKQSLSFRVVDQQQIERHFTMNELTELYTFDPELLEDPAGEG
KKKRHATPVLPKDAFLAEMLQNHKDQLVHYHEHDSLLDHKEEEALSEEDRKAAWAEYEAE
KKGLSLRTNQQAYHMGMGNQPYFPINMAALATMTNRELEDLVNQGRQKVMETSNAINSLV
SEPLEDLISRIWKENPSLEESRVQALAQAQQATIERERQRIEVAYRDVLHKQQTLMMYVQ
KVLNNRKVQEQQIAMAKQGLLMNQLALQNGMMGTGNLNQMELLGLYQHLQQMQGMGGNPG
PSKGL
NT seq
6318 nt
NT seq
+upstream
nt +downstream
nt
atgactacagacatcaaaagtatccatggtagttccagcaagctgaatacattggtgaca
aaactccatgagtacatgagttattctgcagaagaggatattaatgaggcccaaacgtcc
ggtaatatggcctctacggaatcaaacacagctgaccaaatcatggaagagcctgggagc
tccacagagacagcaaagccctcctcttcgagatctaagaggaaacccactactgtgacc
aagcacactggcctagatcagtctgatgactctgagcagcagcagagtgaacaggaggaa
gacccctctgacagcaacacagaaatgaccagtttaccaaaaggcactatagtggtcaac
cccgaacctgtagagaatgaatcgaaagatgatttcacgggccccgagttcaaaagccga
agcgcgaagagcaaaggagaggtccaaaggaaacctgtgggaaatgaaatttcacttcat
gaaagagtgaattgcacagcctgtggccagcaagtcaatccttatcagagggattctgtc
ttggagcatcccattttaaaagttcttatctgcaagtcatgttacaaatactacatgagt
gatgacatcagcaaagatgccgatggtatggatgaacaatgcaggtggtgtgcagaagga
ggaaacctcatctgttgtgactattgcagtaatgccttctgcaaaaagtgcattttacgc
aaccttggccggaaagagttgtccgggataatggatgagagcagcaagtggtactgcttt
gtctgtagccctcagcccctggtggacttgtcctcgtcctgcaataagatcatgctgaaa
cttgagcaattgtggcgtcgggaacacaagccaaaatcaggcaaatcggagcgcaagcga
gacaaggccgccctcaacgggaaggagcaccattccgagagctctggaaccttgacgttc
tcccccaagttcctacagattccaaaagagctggtcaaaaagacgaaaaagctcatagag
accacgacaggcttgaacaacacgtttgtacagttcattcagcaggcctcgaaagacaaa
ggggccaagcctttgttacggtaccgccatctcaaagctttcaagtctgtgctggctgac
ctgaagatggcccatgccaccctggaggaggccctggaggtggagttcagagaactggag
ctccagaacggggccgagggcacagtgggtcacgccgaagtcgagcaacaaacaccagct
gaagccgagcccactgagcaggctggggctgatgaggtccagaatgacgaggctgtagat
gggtctgatgcggaggaggacgctgcagattttatggccgcggatgatgacgtggagatg
aaggatagccccattccctcacccccggaacagggtaatggcagcgaagtaggggaggtg
gacacactcagggaggaggaagaggaggaggatgaagtcaagctggatggagactgtggc
gtagcggaggatgggaatatgctggacggagattcttcagagcttgacagggcgattctc
tcagccacaccctccatccctgacgaactgttccagatggtcgagagtctcgcggactcc
acaaagcttgctgctgctgatgaggccagagaggccaaagtcgctgactcgtcggcctca
gtgtcttcggctgaagaatcccaaccgatagagcccgacgaggctggggaaaagtcctcg
ggggctcagaaaaggatcgctaccctgggcaagaagaagcttgtggtgaagctaaccccc
atgcctctcagagtcagtttgaaaactgagacggtcagcgaggccaagggtcgcgtcgaa
cgcgtctctccggatgatggccccaagagccgccgatcccctagagtcaagacgactccc
cttcgcaaaccttctgagagcaaggataagggtaaaagcaacggcaagcaggacgcagac
aagaggaccaaggtgaagaccacaaagacctccagtgaccaggaggaaggggcagcagcc
aaggtgtcgtccacccaaatggactccgactcagacgaggtcccttcgatccttgctgag
agggctgcccaggaagccagctcgggggatgaggcagcgtcctctggaaagaaggtgaag
agggagggccgcagtaactcagcggcacggtcctccgagagaaggtcaaccaaacgcaag
cttaacttgaagtccacctcctcggagtctgaccaagaatcgggaaccaagaatagcacg
gccaagagggcaagcaagaggacaaagacaaagactgccggctcagagtctgaaaacttc
gactctgatctggagaaagacatgaagagcctgggtaagcttggcacaggcaagaaagga
gttcgtaaggtgaaacaggaaagcaaagagatccctgagaagcctggcaaaactaagaaa
aggtccttcgaacgcacacgcaagaccaggagaagcaaggccagtgccaaccaatcatct
tcctctagtgacaatgaggaagacaaagcagaggactctgctgaggacagcgacgacaag
caaaagattcggccccttatggactctgtgatgcctggagtagaggcattccagcagtct
tcaggggatgaaggtggcgtcaaaggtgaaccctctcagatgcctgaggatgatgacgat
gacccagagaatagaattgcgaagaaaatgctgcttgcacaaatcaaggccacttattcg
tcaggggcggagagctcttcggagcacagcgactccgagcaggaggacggaaagccagcc
aagaaggtcaagaatggaagcggcgaggagaacggagaggatggcgatagctcagaggat
gacgaggactctgaagaagactccgatggtaaaaagaagggccggcgccatcgcttgctc
cgacacaagctgtcgcttagcgagggcgaatcaggcacagagaagtcagccaaaggcggg
aagaaggagaaaggcaaaaagaagagcaggaggaaagtggtcagcgatgattcggcagac
tctgactttgagggttcaccgtcaagtgatgacgatggatctgctctcagtgaggaagtc
agtgaatctgagggagaagttggcaacaaacgaaaaaccagatctgctaagaaggcggcg
aaggagaaggaggagcggagctacaagcagaagcagaagaagaagcggcgccgcatcaaa
gtgcaggactcctccagcggcaagagtggggaggaggatgaggaggaaggagaagagggc
gaaggagatggagaaggagacgacgacgacgacgacgacaaaggaacaccaaaaggccgc
aagaagatccggaagattctgaaggaatccaagctgcggatggagacgcgagacgctctg
aaggaggaggaggacaggaggaagcgcatcgccgagagagaggcactgagggagaaactg
cgggaggtgatcgtgctggacgaggcgtctcaggtgatcgtggtggacgattcgtcccag
gtcgcctgtcctatcaccaccaagctggtgctggacgaggacgaggagaccaaagagccg
cttgtgcaggtgcacaggaacatggtcaccaagctcaagcctcaccaggtggacggtgtg
cagttcatctgggactgctgcgttgagtctgtgaagaagaccaagaagtcctccgggtcg
ggctgcattctggcccattgtatgggtctagggaaaacgcttcaggtggtgacgttcctc
cacaccatgctgctgtgtgagaagctgaacttcaccacggctctggtcgtgtgtccactc
aacaccgtcctcaactggaagaacgagtttgagaagtggcagcatggcttcaaggatgaa
gagagcttagaggtggtggagctggccaccgtgaagcgtcctcaggagcgggcgtacgcc
atgcagcgctggcacgaagatggcggcgtgctgatcatcggctacgagatgtaccgcaac
ctcacgcaggggcgcagcatcaagagcaagaagctcaaagagacctttcagaagaccctg
gtggatccaggccctgactttgtgatctgcgacgagggccacatcctgaaaaacgaggcg
tcggccatctccaaagccatgaacagcgtcaagacccgcaggagagttattctcaccgga
acaccactgcaaaataacctcattgagtaccactgcatggtgaacttcatcaaagagaac
ctgctgggttccgtcaaagagttccggaaccgtttcatcaaccccatccagaacggccag
tgcgcggactccaccccgcaggacgtgcggctcatgaagaagagggcgcacatcctctac
gagatgctggcaggatgtgtccagagacgagattatacagcgctgaccaagttcctgccc
ccgaagcacgagtatgtgttgtctgtgcgcatgacttccatccaggccaagctctaccgc
cactacctggaccacttcacaagtgtggggagtgcgctggagggtaaccgggggagggct
gggaccaaactcttccaggacttccagatgctgagccggatttggacccatccctggtgt
ctgcagctggactacatcagcaaagaaaacaagggttactttgatgaggacagcatggag
gagttcatcgcctcggacacggaagagtcttcgatgagcctcacctctgaggacgagaag
cccaaaaagaagaaggctcgcgggaaggcgaagaagaagagctcggacggttcggacagc
gacgccgtagaggtcatcaaggagtggaacacaagctcccgcggtggcaaccccgaaagc
cgcaaccggggcgaaccggtcgaggagccaaagggggcctctagcagctattctcctgac
tggtacaaggactttgtgaccgacaaagatgcggagatccttgaacattccggaaaagtg
tcgcttctctttcagatcctacgtatggccgaagagacggatgaaaaagttctagtgttc
agtcaatcccttatctctctggatctgatagaagacttcctggagctctcctgtcgagca
aaggacgaagggaaggagtctccgtacaaaggggaggggaagtggttccggaacattgac
tactatcggctggacggctccaccaatgccatgacccgcaagaagtgggcggaggaattt
aacgacacaaacaaccccagaggtcgtctcttcctcatctcgaccagagcaggctctctg
ggcatcaacctggtggcggccaaccgggtcatcatcttcgacgcctcctggaacccgtcc
tacgacatccagagtatcttccgcgtctaccgcttcggccagcaccggccagtcttcgtc
tacaggtttttggctcagggaaccatggaagagaagatctacgaccgtcaggtggccaag
cagtcgttgtcgttccgcgtggtggaccagcagcagatcgagcggcacttcaccatgaac
gagctgaccgagctctacacctttgaccccgagctgctggaggacccggccggagagggc
aagaagaagaggcacgccacgccagtgctgccgaaggatgccttcctggcggagatgctg
cagaaccataaggaccagctggtgcactaccacgagcacgactctctgctggaccacaag
gaggaggaggccctcagcgaggaggaccgcaaggcagcctgggcagagtacgaggctgag
aagaagggtctgtctctgcgcaccaatcagcaggcgtatcacatgggcatgggcaaccag
ccctacttccccatcaacatggccgccctggccaccatgaccaaccgggagctggaggat
ctggtgaatcagggtcggcagaaggtgatggagacgagcaacgccatcaactcactggtg
tcagagccactggaggacctgatcagtcgcatctggaaggagaaccccagcctggaggag
tcgcgggtgcaggcgctggcccaggcgcagcaggccaccattgagcgggagcggcagcgc
atcgaggtggcgtaccgggacgtgctccacaagcagcagacgctgatgatgtatgtgcag
aaggtgctgaacaaccgcaaggtgcaggagcagcagatcgccatggccaagcagggcctc
ctgatgaaccagctggcgctgcagaacggcatgatgggcacgggcaacctcaaccagatg
gagctgctgggcctctaccagcacctgcagcagatgcagggtatggggggcaaccctggg
ccctcaaagggcctgtag
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integrated database retrieval system