KEGG   Sardina pilchardus (sardine): 134068787
Entry
134068787         CDS       T10667                                 
Symbol
pcdh20
Name
(RefSeq) protocadherin-20
  KO
K16498  protocadherin delta 1
Organism
spil  Sardina pilchardus (sardine)
Pathway
spil03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:spil00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    134068787 (pcdh20)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:spil01009]
    134068787 (pcdh20)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:spil04515]
    134068787 (pcdh20)
Protein phosphatases and associated proteins [BR:spil01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     134068787 (pcdh20)
Cell adhesion molecules [BR:spil04515]
 Cadherins
  Protocadherins
   134068787 (pcdh20)
SSDB
Motif
Pfam: Cadherin Cadherin_CELSR2_9th Cadherin_2
Other DBs
NCBI-GeneID: 134068787
NCBI-ProteinID: XP_062380533
LinkDB
Position
21:26028354..26031456
AA seq 839 aa
MNTAVLLQKVLFVVILKQTMCRTLTFHVEEEQQEGVYVGTISRDYLGPYRLLDGDFLSLH
ENTGDLYTTKQIIDRESVCPIPQHGDCTRTCHAVVGLQEEVIKIILNVEDINDNAPYFPE
HVMRLTVTEDVSVGTSFVLDGEARDADFGSNGEISYHLQDSKFFSVREEGPSLVLVLQKE
LDHEIQDNHQMTVIAADHGLIPLSSSATVIITVSDVNDNCPEFDPDSPHSVSINGNTPKG
SFIAQVKATDRDAGDNAAIAYSFSRKNSEKAMALFHLDTRSGLITLADDVQADSPQEFVL
KVFASGPLCSPVASEVTISVQPMTGAQPVIEIRFIAEHENQTILLQENAPPSPLALLELR
DCTSGCALSIEEDVPFSLKPQTQNGHYRLSTSKPLDFEIHSEYHITIVIANSQGKLLTHK
KVIKVLVVDVNDNAPQFSQAHYQIHVEENNKPGASILQVRAFDPDSQHNGMLFYRLSEST
SPIFHVDRVTGELTVSVSLDREQREVYSVTVLARDNGTPPLETSASVSVHVLDQNDNVPA
FLTPHFIFFVLESIPRLSPVGKIGVTDIDQGANGHIEVRVFNSTGPFVMDNVQGMLRCTT
QLDREERDHYELFLEALDGGSPALSATARVTIYVEDVNDNWPQVIVPPSNLTCLTVRPST
PAGSAVTRIHAVDKDSGINSDITYHLVGSEPAQNCPFQIDPHSGNISLTQHLMGQDYGMH
HLFIVVSDGGKPTPLQTPVWVNLLVNETLAQCHLNSVPKSLPRTLPRPTVPNQCETSEQN
GQNPKLILLIGLGMVVLSLCLLSIAVGLFVKQRNMRHHVKAREMIPLRDKHCSDHWEKD
NT seq 2520 nt   +upstreamnt  +downstreamnt
atgaataccgctgtcttactacagaaagtgctttttgtggttattttaaagcaaacaatg
tgccgtacactgactttccacgtggaagaggaacagcaggaaggtgtctacgttggcact
atcagcagagattatctgggcccataccggctgcttgatggggacttcttaagtctacat
gaaaacaccggcgacctgtatactaccaagcagatcatagatagagagagcgtgtgccct
attccgcaacacggtgattgcaccagaacctgccatgctgttgttggtctacaggaagaa
gtcataaagatcatactgaatgtggaagacatcaatgacaatgccccatatttccctgag
catgtcatgcgcttgactgtgacagaggatgtaagtgttgggacaagttttgtcttggat
ggtgaagctcgggatgcggactttggcagcaatggtgagataagctaccatttgcaggat
agtaaattcttctctgtgagagaggagggaccctccctggtgcttgttctgcaaaaggag
ttggatcatgaaattcaggataaccatcaaatgaccgttattgctgctgaccatggtctg
ataccactcagcagcagtgccacagtgatcattactgtgtctgatgtcaatgataattgc
ccagagtttgatccagacagcccccattcagtgagcatcaatggaaacacacccaagggc
tcattcattgcccaggtgaaagccacagacagagatgcgggcgacaatgccgccatagcc
tactcgtttagcaggaagaactcagagaaggcaatggccttgttccatctggacacacgc
agtggactgatcaccttagctgatgacgttcaggctgacagtccgcaggagtttgtgctg
aaagtcttcgccagcggccccctctgctcccccgtcgcctccgaggtaaccatatctgtg
cagccaatgacaggggcccagccggtgatcgagatcaggttcatagcggagcatgaaaac
caaactatactgttacaggagaacgcgccgccatctcccctggcgcttttagagctgcgg
gactgtaccagcggctgcgccctctccattgaggaagacgtgccattttccctaaaacca
caaacgcaaaatggtcactatcgcctttcaacatcaaagccacttgactttgaaatacat
tctgaataccatattaccattgtcatcgcaaactcccagggcaaacttctgacacataag
aaggtgatcaaagtgctggtggttgatgtgaatgataatgccccgcagttcagtcaggca
cactatcagatacatgtggaggagaacaataagccaggggccagcattctgcaggtcagg
gcatttgatccagacagtcagcacaacggaatgctattttacagactgagcgagagcacg
tccccgatctttcacgtggaccgcgtgacgggcgagctgacggtgtcggtctctctcgat
cgagagcagcgggaggtttactcggtgaccgtgctggcccgagacaacggcaccccaccg
ctggaaacctcagcgtctgtgtctgttcacgtgttggaccagaatgacaatgtgcccgcg
ttcctcacaccgcattttattttctttgtgctggagagcatcccccgtttgtcgcctgtg
ggaaaaattggggtgacagacatagaccaaggtgccaatgggcacatagaggtgcgtgtg
tttaacagcactggcccgttcgtcatggacaatgtccagggaatgctgcgctgcacgaca
cagctggaccgtgaggagcgggaccattacgaactcttcctggaggcgctagacgggggc
agccctgcgctgtctgccaccgcccgggtcaccatttacgtggaagacgtcaatgacaac
tggccccaggtgatcgtgccccccagcaacctcacctgcctcaccgtgcggccgtccacc
ccggcgggctctgcggtcactcgcatccacgctgtggacaaggactcggggatcaactcg
gacatcacctaccatcttgtcggcagcgagccggcgcagaactgcccgttccagatcgac
ccgcactcgggcaatatttcactcacccaacatctgatgggtcaggactatgggatgcac
cacctctttattgtggtgagcgatggggggaagccaaccccacttcagaccccagtgtgg
gttaacctgttggtcaacgagacattggcgcagtgtcacttaaacagtgttccaaagagc
ttgccaagaacactcccacggcccacggtgccaaatcagtgtgagaccagcgagcagaac
ggtcaaaatcccaagttaatactactcattggcttaggcatggtcgttttatctctgtgc
ctcttgtcaattgccgtggggctgtttgtgaagcagagaaacatgaggcatcatgtaaag
gcccgtgaaatgatcccactgagggacaagcattgctctgatcactgggagaaagactga

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