Sardina pilchardus (sardine): 134068897
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Entry
134068897 CDS
T10667
Symbol
upf3b
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03013
Nucleocytoplasmic transport
spil03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
spil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
134068897 (upf3b)
mRNA cycle factors
P-body specific factors
134068897 (upf3b)
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GFIT
Other DBs
NCBI-GeneID:
134068897
NCBI-ProteinID:
XP_062380681
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Position
21:complement(28528218..28533358)
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AA seq
462 aa
AA seq
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MIMKEDKENTRPREKKVDMKCEENEKPDKPCKDKKEAMTKIVIRRLPPSLTKEELEEQLQ
PLPEVDYLEFFSNDTSLYPHLFSRAYLNFKNQDDIVLFRDRFDGYVFIDSRGQEYPAVVE
FAPFQKIAKRRSKKRDAKSGTIEEDGDYKKFLEFYNGDDEKLTSTPETLLEEIEAKTKEL
IAKKTTPLLDFLKNKQRIREEKKEERRRRELERKRLRDEERRKWREEDRRKRKDAEKLKK
GERAAEKDKEQSKEEPKIKLLKKPDKADEGEAEKPKEKGKKAEREKQKEERAAGSSDMKK
RQNGENREDRPRKLDEDGRKDYRDRDVDRDRERDRERRLKEKERIRRQDEDRRRRRERHD
GENTFKKREEEGRKERWEKRRNENSGESSSHADKPEKTSKDHKREESNKRERLRNKDRPA
IQLYQPGARSRNRTGSGPSGDSHVANKKADSDGKITQEKGEE
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaagaagacaaagaaaatactcgtccgagagagaaaaaggtggatatgaaa
tgtgaagaaaatgaaaagcccgataagccatgtaaagacaaaaaggaagcaatgaccaag
attgtcatccgacgtctcccaccgagtttaacaaaggaggaattagaagagcaactgcaa
cctttacctgaagttgactaccttgagttcttttctaatgacaccagcctctacccgcat
ctcttctcaagagcgtacctaaatttcaagaatcaagatgacattgtacttttccgagat
cgctttgatggatatgtctttatcgacagcagaggtcaggagtatccagcagttgttgag
tttgcgccattccagaaaattgccaaaaggaggagcaagaaaagggatgccaaaagtgga
acaattgaagaagatggtgattacaagaagtttctggagttttacaatggagatgatgaa
aagctgacatctacaccagagactctgcttgaggagatagaggctaaaacgaaagaactt
attgccaagaagactacacctctcttggatttcctgaagaacaaacagcgaataagggag
gagaagaaagaagagaggagaagaagggaacttgagcgaaagcgcttgcgggatgaggaa
cggcgcaagtggagagaagaggaccgacggaaacggaaggatgctgagaaattgaaaaaa
ggagagagagctgctgaaaaggacaaagaacagtccaaagaagaacccaagatcaagctc
cttaagaaacctgacaaagctgatgagggtgaggctgagaagcctaaagagaaggggaag
aaggctgagcgagagaagcagaaggaggagagagctgctggaagttctgacatgaagaag
cgccagaatggcgaaaaccgtgaggacaggccaagaaagttagatgaagatggccgcaaa
gactacagagatcgggatgtggatagagatagagagcgagaccgcgaacgccggctgaaa
gaaaaggagcgtatcagaagacaagatgaagaccggcgtaggaggagagagcgtcatgat
ggagagaacaccttcaaaaagcgagaggaggagggaaggaaagagcgttgggagaaaagg
aggaatgaaaacagtggagaatcctccagtcatgcagataaacctgaaaaaacatctaaa
gaccacaaaagggaagaaagcaacaaaagagagcggctgaggaacaaggaccgacctgct
atccagctctaccagccgggtgccaggagccgcaaccggaccggaagtgggccgtcaggt
gactctcatgtggccaacaagaaggctgatagtgatggcaagatcacccaggagaagggc
gaggagtga
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