Sardina pilchardus (sardine): 134068933
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Entry
134068933 CDS
T10667
Symbol
pcdh12
Name
(RefSeq) protocadherin-12
KO
K16499
protocadherin delta 2
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
spil04515
]
134068933 (pcdh12)
Cell adhesion molecules [BR:
spil04515
]
Cadherins
Protocadherins
134068933 (pcdh12)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
134068933
NCBI-ProteinID:
XP_062380741
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All DBs
Position
21:11744142..11761232
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AA seq
1195 aa
AA seq
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MLAQSLSQVLVLVLVFCLACRAQSSNPTPHTVTYRVLEEQEAGTKVGRLVDDLRQRGEQG
SLEDFQVAGHGQALPFSVSARGGEVSTLRRLDREELCRGVDRCEIAFNILYRRAGAMDFL
HVRVEVTDLNDHSPTFPSLRQDVEISETAALGMRIPLERAVDLDAGPNGLQTYSMSVSQH
FALDVKSGSGGTKQAELVVIKELDREELSSIDITLLAFDKGNPPRSGMTIVTVHILDSND
NSPVFENGAPSVVLPEDTSRGTVVINLRATDPDEGANGEIEYSLSKHAPADVQKIFSVHP
QTGAVTLVGPLDYEEKDTYEVDIQARDLGPNGIPSHCKLQVKLRDVNDNAPRIHVTWTPP
DSPVATVSEGAPNETFLALVMVSDADSGENGEVRAHIQHGSGHFRLKNIHGDNYMIVTNG
TLDREKTMEYNLTLFARDNGQPSLTCFRHLTVRVLDENDNAPVFSKTHYRATFKENNKVG
FQVLTVEATDVDLDLSGKVSYSIYESNDLATPSFSFSVHPTTGVVTVQQSLDFEESRVYT
FVVQAIDHGHPPLTSSATVIIELQDDNDNYPEINDPPPKGGVAKVSVPVNAEKGEIVAEV
GEKVNERPVYLPTNRTSGRKHQGFLATTIKAHDPDSGLNGKIHFRIVDGNPSRLFWLDTK
TGQLYVNTTNATDLIGKTFKVGIAVSDMGTPVLVTRTTLEVNFINLLDHLKNSAPGHQAQ
LSFTMLMAICVGASCLLLLLAVALVTTFCRTEKRDNHAYNCRQAESTYASHPRRPQKHIR
KTDIQLVPVLRGRRDDHPQGDEAQPLSSGAPPSPTELHGDGQFSISRSAHAMPDPNMTLQ
LSQTRTLRKPGNIELDGPVPHTPGMPYRTLRKARNPSSSTTSSLSQAGTLKRHHANSEVH
SGTLESQKGNLSPAVSQATLRRPKNTDSLSRQAEHEHRQMLRNLVRLSMAAFSGDSPIEL
SSASPEVQQVSQLLSLLHQGQFQPRPNFRGNKYSHRNGRLGAQDADWLSTKDSGHGESEA
GDVDWEPGRDSPVDPLLEEGLNNLLNSADDVFADVQDPGWIARLSLPLAGDWHENVFIPD
GPQSPDDRGRSGSQGGPGDDSASPSSFSTFGKSPEKAGPLGGALLSEVSTLFEMLLTQKA
DAQPRPSAEMLYRLSAAYRRSLGLDTPPPGGAPFSSARHPAGSDKMAAPSMHSSG
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgctggcccaatctctcagtcaagtgttggtgctggttctggtattttgtttggcgtgt
cgggcccagtcttccaacccgactccccacaccgtcacataccgcgttctggaggagcag
gaggccgggacgaaggtgggccggctggtcgacgacctgcgtcagcgcggggagcaaggg
tcactggaggatttccaggtcgcggggcacggacaggccctgcccttcagcgtgtcggcg
cggggcggcgaggtgtcgacgcttcgccggctggaccgggaggagctgtgccgcggcgtc
gaccgctgtgagatcgccttcaacatcctctacaggagggcgggcgcgatggacttcctg
cacgtgcgcgtggaggtgacggacctgaacgaccacagccccaccttccccagcctcagg
caggacgtggagatctccgagacggcggccctcggcatgagaatcccgctggagcgggcc
gtggacctggacgccgggccgaacggcctgcagacctactccatgtccgtcagccagcac
tttgccctggacgtgaagagcggcagtgggggcaccaagcaggccgagctggtcgtgatc
aaagagctggaccgggaggaactgtcctccatcgacatcacgcttttggctttcgacaag
ggcaaccccccgaggtctggcatgaccatcgtgacagtccacatcttggactccaacgat
aacagtccagtgttcgagaacggggcgccctcggtggttctcccagaagacaccagccgt
gggacagtggtcatcaaccttcgcgccacagaccctgacgaaggagctaatggggagatc
gagtactccctgagtaagcacgccccagcggacgtccagaagattttcagcgtgcacccc
caaactggggccgtcaccctggttggacccctggactatgaggagaaggacacgtatgag
gtggacatacaagctcgagacttggggcccaatggcatcccctcgcactgcaagctacaa
gtcaagctacgagatgtgaacgacaacgctccgaggatacacgtcacctggacgccgcca
gattcgcccgtggccaccgtgtccgagggagcgcccaacgagacgttcctggccctcgtc
atggtttcggacgcagattcgggtgaaaacggcgaggtgcgtgctcacattcaacacgga
tcgggacactttcgcctcaagaacattcacggagacaactacatgattgttactaatggg
acattggatcgggagaaaacgatggaatataatctaacgcttttcgcgcgggacaatggc
cagccctcgctgacttgttttcgccacctaactgttcgcgtgttggatgagaacgacaac
gctcccgtcttctctaagacccactacagagccaccttcaaggagaataacaaagtcggt
tttcaagttctcactgttgaggccaccgatgttgacttggatctcagcggcaaggtgtct
tactctatttacgagtccaatgatctcgccacaccctcgttctccttctcggtccatccc
accactggtgtggtcacggtccagcagtctttggactttgaggagtcccgcgtctacact
tttgttgtgcaggccatcgatcacggtcacccccctctcaccagcagtgccacggtaatc
atcgagctccaggatgacaacgacaactaccctgaaatcaacgaccctcctcccaagggt
ggcgtggcaaaggttagcgtacctgtgaacgcagagaaaggggagatcgtggcggaggtg
ggcgaaaaagtcaacgagaggccagtttacctccccaccaatcggacctcaggacgtaaa
catcagggcttcttagccacaaccatcaaggcccacgatccagactcaggcctgaatgga
aaaatccatttccggattgttgacgggaacccttctcgcttgttctggctggacacgaaa
acagggcaactgtacgtcaataccaccaatgccactgacctcatcggcaagacgttcaaa
gtgggcattgccgtgtcggacatgggcaccccggtgcttgtcacccggacaaccctggag
gtcaatttcatcaacctcttggatcacctgaagaactccgcccctggacaccaggcccag
ctgagcttcaccatgctcatggccatctgcgtcggcgcctcctgcctgctgctgctgttg
gccgtcgccctggtgaccaccttctgtcgcacggagaaacgcgacaaccacgcctacaac
tgcaggcaggcggagtcgacctacgcgagccaccctcgccggccgcagaagcacatccgc
aagacggacatccagctggtgccggtcctgagggggcgccgggacgaccacccccagggg
gacgaggcccagccgctctcctccggagctcctccgtcgcccacggagctccacggcgac
gggcagttcagcatctcccgatcggcccacgcgatgccggatcccaacatgacgcttcag
ctcagccagaccaggaccttgcggaaacccggaaacatcgagctggacgggcccgtcccc
cacacccctggcatgccgtaccggaccctccgcaaggcgcggaacccctcctcctccacc
acctcttcgctctcccaggccggaactctgaagcggcaccacgccaactcagaggtgcat
tctgggacgctggagagccagaaggggaacctgtccccggccgtatcccaggcaacgctg
aggaggcctaagaacacggactccctcagcaggcaggctgagcacgagcacaggcagatg
ctgaggaacctggtgcgcctctccatggctgccttcagtggggacagccccattgagctg
tcgtctgcctcccctgaagtacagcaggtctctcagttgctctcgctcctccatcagggg
cagttccagcccagaccaaacttccgagggaacaagtactcccaccgcaacggccgactg
ggagcgcaggacgctgattggctgagcaccaaggacagtggccacggggagagcgaggct
ggagacgtggactgggagccgggtcgggattcccccgtggaccctctcctggaggagggc
ctcaacaacctcctcaacagcgcagatgatgtgtttgcggatgttcaggaccccggctgg
atcgctcgcctctccctcccactggccggcgactggcacgagaacgtcttcatccccgac
gggccgcagtcccccgacgaccgtggccgcagcggctcgcagggcgggcccggcgacgac
tcggcctcgccctcctccttctccacgttcggcaagtcgccggagaaggcgggcccgctg
ggcggggccctgctgtcggaggtcagcacgctgttcgagatgctgctgacgcagaaggcc
gacgcccagccgcggccctccgccgagatgctctacagactctccgcggcgtaccgccgc
tccctcggcctggacacgccaccaccagggggcgccccgttttcatccgcgcgccaccca
gctggcagcgacaagatggccgctcccagcatgcactcctctggttga
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