Sardina pilchardus (sardine): 134068989
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Entry
134068989 CDS
T10667
Symbol
zgc:110269
Name
(RefSeq) probable flap endonuclease 1 homolog
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03030
DNA replication
spil03410
Base excision repair
spil03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
134068989 (zgc:110269)
03410 Base excision repair
134068989 (zgc:110269)
03450 Non-homologous end-joining
134068989 (zgc:110269)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spil03032
]
134068989 (zgc:110269)
03400 DNA repair and recombination proteins [BR:
spil03400
]
134068989 (zgc:110269)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spil04147
]
134068989 (zgc:110269)
DNA replication proteins [BR:
spil03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
134068989 (zgc:110269)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
134068989 (zgc:110269)
DNA repair and recombination proteins [BR:
spil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
134068989 (zgc:110269)
Exosome [BR:
spil04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134068989 (zgc:110269)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
XPG_N
XPG_I_2
5_3_exonuc
WIV_2
Motif
Other DBs
NCBI-GeneID:
134068989
NCBI-ProteinID:
XP_062380818
LinkDB
All DBs
Position
2:28606730..28615085
Genome browser
AA seq
351 aa
AA seq
DB search
MGITKLADLIRNNAPGAIAHKQISDYTGKIIALDTSIIVNQFRTAVHTMPHLSPLTGLFF
RTLAFLEWDIKPVYVIDGRPPEEKRAELERRAQNAGWNSPPRPRSNAVSSQTQDCLRLLK
LMGVPALIAPGDAEALCAHLAKTGVVDAVASEDMDTLAFGGSLLLRQLNAKRDSDVTEFC
LSKILEMLQLSQKEFVDLCILLGCDYCDKIGGLGPTRALSLIKKHRTIESVSHNINRKTH
PVPLSWTYQRARNLFLESLQVATPELEWKEPDEEGLVGFLCMEKHVIKMDRILGRMEKFR
KSRETKRKEREEAKAAGKSTQTGIKDFFRVTRKRQAVEAVCHGKEKQRKTK
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggggatcaccaagctggcagatttaattcgaaataatgctccaggtgcaatagctcat
aagcagataagcgactacactggaaagatcatcgctttggatacttctattattgtcaat
cagtttcgcaccgcggttcatacaatgccacatttgagtcctctgacaggactattcttt
cggacccttgcctttctcgaatgggacatcaaaccggtgtatgtcatcgatgggaggccc
cctgaagaaaaaagagctgagttggagagaagagctcagaatgcaggttggaactctccc
ccacgtccacgctctaatgcagtttcttcacagacacaagactgtctgcggctccttaag
ctcatgggcgtccctgctctcatagcacctggagatgcagaggccttgtgtgcccatctt
gcgaagactggtgtggtagatgcagtggcatcagaggatatggacactttagcttttgga
ggttctcttctccttcgccagcttaatgctaagagagacagtgatgtcacagaattctgc
ttgtccaaaatcttagaaatgctacaactttcacagaaggagtttgtggacttgtgtatc
ttgctgggatgtgactactgtgacaagatcggaggtcttgggcccacacgggccttgtct
ctgataaagaaacaccgaacaatagagtctgtgtcacataacatcaatagaaagacacac
cctgtccctctcagctggacctatcaaagagcccgtaacctcttcctggagagcctgcag
gtggcgacacctgagctggaatggaaggagcccgatgaggagggtctggtgggcttcctg
tgcatggagaaacatgttataaaaatggacagaattcttggacggatggagaaattccgt
aaatctcgggagactaaacggaaagaaagagaggaggcaaaagcagctgggaaaagtact
caaacaggaattaaagattttttccgtgtgacacggaagcgacaggctgtagaggcagtg
tgccacggcaaagaaaaacaacggaagaccaaatga
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