Sardina pilchardus (sardine): 134069242
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Entry
134069242 CDS
T10667
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04120
Ubiquitin mediated proteolysis
spil04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
134069242 (syvn1)
04120 Ubiquitin mediated proteolysis
134069242 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spil04121
]
134069242 (syvn1)
Enzymes [BR:
spil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134069242 (syvn1)
Ubiquitin system [BR:
spil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134069242 (syvn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf_RING_Vps8_fungal
zf-ANAPC11
zf-RING-like
FAR1_N
zf-RING_Vps41
zf-HC5HC2H
FANCL_C
zf-Nse
Motif
Other DBs
NCBI-GeneID:
134069242
NCBI-ProteinID:
XP_062381129
LinkDB
All DBs
Position
21:24718898..24725500
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AA seq
626 aa
AA seq
DB search
MVRAALVTATSMVLTGAVVAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWVFHFRVLSLMVLLAILDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYTLHTIDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASQPNQTPAPPPAQAPAPAPPANAQ
GPVPGNAPGMMPHFPPGLFPFWGPFPGAAPPAGAPGAQAAADAPPTGASTTQAQAQGSST
SAQPNGEASNTSVPGGAMPGFPFNFPPPPFPSAPWLPMPPPPPFMSSMPPPPASLSSMSD
AELRELEQEGRRGLEARLQCLHNIHTLLDAAMLNIHHYLTTVATLSPPRTEASAGEASGP
STSSNTNSTTENSSQETPAQSPEPVLGATGFSQPDSTTAEEKKEEEAEAAAAAAEAEEEN
DDGEPNAAELRRRRLRKLETTPPPDH
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagcagccctggttacggccaccagtatggtgttgacaggggcggtggtggcc
catgcctaccttctcaaacaccagttctaccccacagtggtgtacctcactaaaagcagt
cccagcatggctgtattgtacatccaagcatttgtgctggtgtttctgttggggaaattt
atgcgcaaagtcttctttggacagctgcgggctgctgagatggagcacctgattgagcgc
tcctggtatgctgtgactgagacctgcctagccttcacagtgttcagggacgatttctcc
cctcgtttcgtggccctattcacactgttgctattcctcaagtgctttcattggttggca
gaagacagagttgactttatggagaggagtccaaatatttcctgggtcttccacttcagg
gtgctgtctctcatggtgttactggcgatactggactttctttttgtaaatcatgcttgc
catagcatcatcacaaggggagcctcagttcagctggtgtttggattcgagtatgcaatt
ctgatgaccatggttctcacaaccttcatcaaatacacacttcatacaattgacctccag
agtgagaatccctgggataacaaggcagtatatatgctgtacaccgaactcttcacaggt
ttcattaaggtgctgctgtatatggcattcatgaccatcatgatcaaagtgcatacgttc
cctctgtttgccattcgtcccatgtatcttgctatgagacaattcaagaaagctgtaact
gatgccattatgtctcggcgagccatccgcaatatgaacacactctatcctgatgccaca
cctgaagatctccaggcctcggataatgtctgcattatttgtcgagaggagatggtgact
ggagccaagaaattgccctgcaaccacatcttccactccagctgcctgcgctcctggttc
cagagacagcagacctgtcctacgtgccgcatggacgtgctgagagcctctcagcccaat
cagacacccgccccgccccctgcccaggctccggcacccgccccacctgccaacgcacaa
ggccctgtgcccggcaacgccccagggatgatgcctcacttccccccggggctcttccct
ttctggggcccgtttcccggggctgcccctcctgccggtgcacctggtgctcaggctgct
gcggatgcccccccaactggcgccagcaccacccaagctcaggcacaagggagcagtacc
tcagcccagcctaacggagaagcctctaacacttctgtccctggaggtgccatgccaggt
ttcccgttcaacttccctcccccgccattcccttctgcaccgtggctgcccatgccacca
ccacctcccttcatgtcctcgatgcctccgccgcccgcctccctgtccagcatgtccgac
gcggagctgagggagctggagcaggagggccggcggggcctggaggcgcggctgcagtgc
ctccacaacatccacacgctgctggacgccgccatgctcaacatccaccactacctcacc
accgtggccacgctcagcccccctcggactgaagccagtgctggagaagccagtggtccc
tcgacttcctccaacaccaacagcaccacggagaactccagccaggagacgccagctcaa
agccctgagccagttttgggggcgacgggattctctcaaccagactccaccacagcggag
gagaagaaggaggaggaagcagaggcagcggcggcggcggcagaggcagaggaggagaac
gacgacggagagcccaacgcggcggagctcaggcggagacgcctccgcaagctggagacc
actccaccccctgaccactga
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