Sardina pilchardus (sardine): 134069362
Help
Entry
134069362 CDS
T10667
Symbol
nfkb1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04010
MAPK signaling pathway
spil04210
Apoptosis
spil04218
Cellular senescence
spil04620
Toll-like receptor signaling pathway
spil04621
NOD-like receptor signaling pathway
spil04622
RIG-I-like receptor signaling pathway
spil04623
Cytosolic DNA-sensing pathway
spil04625
C-type lectin receptor signaling pathway
spil04920
Adipocytokine signaling pathway
spil05132
Salmonella infection
spil05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
134069362 (nfkb1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
134069362 (nfkb1)
04218 Cellular senescence
134069362 (nfkb1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
134069362 (nfkb1)
04621 NOD-like receptor signaling pathway
134069362 (nfkb1)
04622 RIG-I-like receptor signaling pathway
134069362 (nfkb1)
04623 Cytosolic DNA-sensing pathway
134069362 (nfkb1)
04625 C-type lectin receptor signaling pathway
134069362 (nfkb1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
134069362 (nfkb1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134069362 (nfkb1)
09171 Infectious disease: bacterial
05132 Salmonella infection
134069362 (nfkb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spil03000
]
134069362 (nfkb1)
Transcription factors [BR:
spil03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
134069362 (nfkb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
134069362
NCBI-ProteinID:
XP_062381304
LinkDB
All DBs
Position
21:complement(20854541..20888455)
Genome browser
AA seq
973 aa
AA seq
DB search
MAEDASYLHHPQFFDYNLDPSNWIDIEPPVNLPNMSYTNSLRIVDGPYVQIVEQPKQRGF
RFRYGCEGPSHGGLPGASSEKNRKTYPQVKICNYQGPARVVVQLVTNSKDPHLHAHSLVG
KQCDKGICIAELPPKDNTISFPNLGILHVTKKNVTKVLEERMTEAYRMGYNSGVVIHTEI
DACQGEVRLPRELTEHQKSIIATAAAHQSKEMDLSVVRLMFTAFLPDSDGGFSRRLDPVV
SEPIYDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEEGDSGLTWE
AFGDFSPTDVHRQFAIVFKTPKYRDLNLQKPTSVFVQLKRKSDNETSEPKPFTYHPQIID
KEEVQRKRQKTLPNFQDYSGPGGAGGMYRGGGGGPATGGGPGTGGGGGSYYHGYSNFQNY
GSGYTFSPGMGGGATNIKHATTRVEDGDNGSDAGGDDDDDDDPASGGVVKVAPQPDVGIP
GEAREFRGFSAEEGDETDRMNTVCFLESRLAELAERQALALFQYAVSGDPCALLALQRPL
MTAQDEDGDTGLHLSVIHSQPDSVRSLTQVITALPGEDVLNMRNDLYQTPLHLAVITQQR
EAMDVLLDAGAQASLTDRHGNTALHLAAQQTEGDMMAQLLRHPGMAELTDVPNSRGLCAL
HVAVLANSLCAVRALLQAGASADVQELTSGRTPLHLAVEMDNVSLSGCLLLEGNADVDSC
TYNGSTPLHIAAARGSIKLSALLMAAGADPHKENFEPVFFKEDEDSTEQAREDEEDEEDE
GFIPGMTPLGMAASSEVRDILSGKEYQPESSPIPVLAQGDMRSLGPDVKQAVCAALEEQQ
GGWESLAHSLGLGVLTTAFRLSPSPAATLLASYEVSGGTVHELFESLRLAGNSDALKALQ
RHRQPAPVPPPDHPATHITGLSEDILGLKLACHEENGACDSGVETSFQRPSLSLTESLCG
RLELPETPQQAVA
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagacgcttcataccttcatcaccctcagttttttgactacaacttagaccct
agcaactggattgacatagaacctcctgtgaatctccctaacatgtcgtacaccaacagc
ctgagaatagttgatggaccttacgttcagattgtagagcaacctaaacaaaggggattc
aggtttcgctatggctgtgagggcccttcacacgggggactcccgggcgcgtccagtgag
aagaacaggaaaacgtacccacaagtgaagatctgtaattaccagggtccggctcgtgtg
gtcgttcagctggtcaccaactccaaggatccccacctgcacgcacacagcctggtgggt
aagcagtgtgacaagggaatctgcatcgctgagcttccccccaaagacaacaccatcagt
tttcccaacctgggaatcctgcacgtgaccaagaagaacgtgaccaaggtgctggaggag
cggatgaccgaggcctaccggatgggctacaacagcggcgtggtcatccacacggagata
gacgcctgtcagggggaggtgcggctgccccgcgagctaacagagcaccagaagagcatc
attgctacagcggcggcgcaccagtccaaggagatggacctgagcgtggtgcggctcatg
ttcacggccttcctgcccgacagcgacgggggattctcgcgcagactggacccggtggtg
tcagagcccatctacgacagcaaagccccaaacgcctccaacctgaagatcgtccgtatg
gaccgtacagcaggctgcgtgaccggaggagaggaggtctacctcctgtgtgacaaagtc
cagaaagatgatattcaggtgcgtttctatgaagagggagacagtggccttacctgggaa
gcatttggtgacttctcacctacagacgtccacagacagtttgctatcgtcttcaagact
ccaaagtacagagacttgaaccttcagaagccaacctctgtatttgttcagctgaagagg
aagtcggacaacgaaactagtgaacccaagcccttcacctaccatccgcagatcatagat
aaggaggaggtccagaggaagaggcagaagacgctgcccaatttccaggactacagcggc
ccgggcggagcgggggggatgtaccggggcggcgggggcggaccggccaccggcgggggg
cccggcacgggaggaggaggaggctcgtactaccacggctactccaacttccagaattac
ggctctggctacacattctccccaggcatggggggcggggccaccaacatcaagcatgca
accactcgtgtggaggacggcgataacggtagcgatgctggtggcgatgatgacgacgac
gatgacccagcctcgggaggggtcgttaaggtcgccccccagcccgatgttggcatccca
ggggaggcgagagaatttcgagggttttctgcggaagagggtgacgagacggacaggatg
aacacagtgtgtttcctggagtccaggctggccgagttggctgagaggcaggcgctcgct
ttgttccagtatgcggtctctggagacccgtgtgccttgctggctctacagcgccccctg
atgactgctcaggatgaggacggagacactgggcttcatcttagtgttatccacagccag
ccagactcagtcaggagtttgactcaggtcataactgcccttccaggagaggatgtgctc
aacatgaggaatgacctctaccagacccccttgcacctggcggtgatcacgcagcagagg
gaagccatggacgtcctcctggacgctggggcgcaagccagtctcaccgatcgccatggc
aacacggccctgcacctggccgcccagcagacggaaggggacatgatggcgcagctactg
cggcaccctggcatggccgagctgacagacgtgcccaactccaggggtctatgtgctcta
catgtggctgtgctggctaacagcctgtgtgcggtgcgggcacttcttcaggccggggcc
agtgccgacgtgcaggaactcaccagcggacgcacgccactccacctggccgtcgagatg
gacaacgtctcgctcagcggctgcctgctactggagggcaacgctgatgtggactcctgc
acttacaacggctccacccccctccacatcgcagccgcccgcggatccatcaaactcagc
gctctactcatggctgcaggggcagaccctcataaggagaactttgagccagttttcttc
aaagaagatgaggactccaccgagcaagccagggaggatgaggaggatgaggaggacgaa
ggcttcatccccggaatgactcctctgggcatggctgcctcctcagaagtgcgagacata
ctgagcggaaaggagtaccagccggagagcagccccatccccgtcctggcccaaggggac
atgaggagcctggggccggatgtgaagcaggctgtgtgtgcggcgctggaggagcagcag
ggcggctgggagagtctggcccactctctgggcctcggggtgctcaccaccgcattccga
ctcagcccctcgcccgccgccactctgctggccagttacgaggtgtcggggggcaccgtc
cacgagctgtttgagagcctgaggctggcagggaacagcgacgccctgaaagcgctacag
cggcaccgccagcccgctcccgtccctccgcccgaccaccccgccacgcacatcaccggt
ctgtctgaggacatcctgggcctgaagctggcctgtcacgaggagaatggagcgtgtgac
agcggggtggagacctccttccagcggccgagcctcagcctgaccgagtccctgtgcggc
cgcctggagctgcccgaaaccccgcagcaggccgtggcctag
DBGET
integrated database retrieval system
