Sardina pilchardus (sardine): 134069707
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Entry
134069707 CDS
T10667
Symbol
valopb
Name
(RefSeq) vertebrate ancient long opsin b
KO
K04256
c-opsin
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
spil01009
]
134069707 (valopb)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
spil04030
]
134069707 (valopb)
Protein phosphatases and associated proteins [BR:
spil01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134069707 (valopb)
G protein-coupled receptors [BR:
spil04030
]
Rhodopsin family
Vision
Opsin
134069707 (valopb)
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srv
7TM_GPCR_Srsx
7tm_4
Motif
Other DBs
NCBI-GeneID:
134069707
NCBI-ProteinID:
XP_062381719
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All DBs
Position
22:24303556..24310993
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AA seq
415 aa
AA seq
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MASFVLSVNGVSFTEATEKLEPENPYQGPLSYISPWNYTFLACLMFVVTSLSLSENFTVM
LVTFKYKQLRKPLNYIIVNLSVADFFVSLIGGSISFLNNAYGYFILGNWACVTEGFAVTY
LGIVALWSLAILAFERFFVICRPLKNVRLGVKHAGLGLLFVWTFSFIWTIPPVLGWNSYT
VSKIGTTCEPNWYSTDYTDHTYIITFFTTCFILPLGVIIGSYGKLMQKLRKVSNTHGRLG
HARKPDREVARMVIVMIAAFMIGWAPYACFSITVTACPTIYIDPRLAAAPAFFAKTAAVY
NPIIYVFMNKQFRKCLIHMFKGGTASLDSTHINQTSDRGTTAESHMGEMSTIAARVPLSS
VCNMERTQEEDEEVDDDDEEAVACRGGEEEKHGENNGGTNNTLPVSVNENKVCPL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctttcgtcttgtcagtgaacggggtttcattcactgaagcaacggagaaactc
gaacccgagaacccataccaaggacccctctcatacatttcgccatggaactatactttt
ttggcgtgtttaatgttcgttgtgacctcgctgtctctctctgagaacttcaccgttatg
cttgttacttttaaatacaaacagcttaggaaacccttaaattatatcatcgtaaactta
tcagtagcggatttctttgtgtcactcatcggagggagcataagttttcttaacaacgca
tatggctacttcattctgggcaactgggcttgtgtcacagaaggattcgccgtcacatac
ctgggcatagtggctctgtggtctttggccatcctggcctttgagcgcttttttgtcatc
tgccgacccctaaagaacgtgcgcctcggggtcaagcacgccggtctgggtctcctcttc
gtctggaccttctcgttcatctggaccatcccgccggtgctgggctggaacagctacacg
gtcagcaagatcgggaccacctgtgaacccaactggtactccacggactacacagaccac
acgtacatcatcaccttcttcaccacctgcttcatcctgcccctgggagtaatcatcggc
tcttatggcaaactcatgcagaagctccgcaaggtgtccaacacccatgggaggctgggc
cacgccaggaagcctgaccgggaggtggcacgcatggtcatcgtcatgatcgcggcgttc
atgatcggctgggcaccttacgcctgcttctccatcacggtcacggcctgccccaccatc
tacatcgaccccaggctggccgcggcgcccgctttcttcgccaagaccgccgccgtctac
aaccccatcatctacgtattcatgaacaagcagtttaggaagtgcctcattcacatgttc
aagggtggcacggccagcctggactccacccacatcaaccagacgtcggaccgcggcacc
acggccgagagccacatgggcgagatgtccaccatcgccgcccgcgtcccgctctcgtcc
gtctgcaacatggagcgcacgcaggaggaggacgaggaggtcgacgacgacgacgaggag
gccgtggcgtgccgggggggcgaggaggagaagcacggcgagaacaacggcggaaccaac
aacacgctccccgtcagcgtcaacgagaacaaagtgtgccctctctga
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