Sardina pilchardus (sardine): 134069765
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Entry
134069765 CDS
T10667
Symbol
tsen54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54 isoform X1
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spil03016
]
134069765 (tsen54)
Transfer RNA biogenesis [BR:
spil03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
134069765 (tsen54)
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
134069765
NCBI-ProteinID:
XP_062381817
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Position
22:complement(2512449..2523300)
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AA seq
570 aa
AA seq
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MADGETSTEQPKLRFCSEILSPSELFQARTRSHKLPLRGQKDFLPMESPRQQERLEQSLQ
EHWSLVAEERVERSGSLVKAVWIPDDGTVELQTPAGKFWQTMGYAAHGKQYLLPEEALYL
MECGNLQVFHHKLPLSIEEAYEKLLSSEHVSLQQYQVFGHLKRLGYVVNRFDPSIVQSMY
ERQLNLPQTRDRHGAHLKRKRSPSPAHRHTGSPTSPPSERPTGPPSSERLDPPANPPSER
ATTLPSERAVEDKRVDPPGDPPSESAVQEGFSAPDPPQRQEQSPGSGRSWWTRESRFSET
TAVPGLQEAEQQNPSPSPSPSPSSPSPAASSAAARWDFGKIHFPNLGSSRASRASPLGPP
DPRLLPGALQVGSRCDVAPWLRRLNTRAEHLSRRERERQRERDRYRRDVNDDRDVRRCRN
WAEYQQLLDRKRRSRRHRGDRPAHLWEGVVTPLSQPGHASSHGDLLNQIGVIQSSRLLDD
AISLSIPPQWKISFDVYQPDTVADYKKSNPGKPYTRMCVCSFEGPVPDLQVVKSLSLQSG
QVSVTFAVVDHGDISFYCFKDFTLPVDVCR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggccgatggtgagacgtcaacagagcagccgaaacttcggttctgcagtgaaatatta
agcccgtcggagctgttccaggcgcggacgcggagccacaaacttccgctgcgcggccag
aaggacttcctgcccatggagtctccacggcaacaggagcgtctggagcagagtctgcag
gaacactggagcctagtggccgaggagcgcgtggagagatcggggagtctggtgaaggcc
gtgtggatcccagatgatggtaccgtggagctgcaaacaccagcagggaagttctggcag
accatggggtacgctgcacacgggaaacaatatcttctgccagaggaggcgctctacctc
atggagtgtgggaacctgcaggtgttccaccacaagctgccgttgtctatcgaggaggcc
tacgagaagctcctgtcctccgagcacgtcagcctgcagcagtatcaggtgtttgggcat
ctgaagaggctgggctacgtggtcaacagatttgaccccagtattgtccagtctatgtac
gagcgtcagctgaacctgccgcagacgcgggatcgccatggagcccacctgaagagaaaa
cgcagcccgagccccgcccacaggcacacgggcagtccaaccagccccccctcagagaga
ccaaccggccccccctcttcagagagacttgacccccccgccaaccccccctcagagaga
gcaaccaccctcccctcagagagagcagtagaggacaagagagtggacccccccggtgac
cccccctcagagagcgccgtgcaggaggggttctcggcccctgaccccccccagaggcag
gagcagagccccgggtcgggcaggtcctggtggacgagggagtcccggttctccgagacg
acggcggtgccgggcttgcaggaggcggagcaacagaacccctccccctccccctccccc
tccccctcctccccctcccccgccgcctcctccgccgccgctcgctgggactttgggaag
atccacttccccaacctgggctcctcccgcgcctcccgcgcgtctcccctgggtcccccg
gacccccggctgctgcccggggcgctgcaggtgggcagcaggtgcgacgtcgccccctgg
ctgcggaggctgaacacgcgggccgagcacctgtccaggcgcgagcgcgagcggcagcgg
gagcgagaccgttaccgtagggacgtgaacgacgaccgcgacgtgcgccggtgcaggaac
tgggcggagtaccagcagctgctggacaggaagaggaggagtcgacgtcaccgtggcgac
aggccggcacacctgtgggagggcgtggtcacaccgctctcacaaccaggccacgcctcc
tctcacggtgatttgctcaaccagatcggggtgattcagtcgtcacggctactggacgat
gccatcagtttgagtatcccgccacaatggaagatcagtttcgatgtttaccagcccgac
acagtggctgactacaagaagagcaaccccggcaaaccttacacacgcatgtgtgtctgc
agttttgagggtccagtgcctgatcttcaggtggtgaagagcttgtccctccagagtggg
caggtgtccgtgacctttgcagtggtggatcacggagacatctccttctactgcttcaag
gacttcacactgcctgtggacgtgtgccgctga
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