Sardina pilchardus (sardine): 134069843
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Entry
134069843 CDS
T10667
Symbol
rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spil04121
]
134069843 (rnf40)
Enzymes [BR:
spil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134069843 (rnf40)
Ubiquitin system [BR:
spil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
134069843 (rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
zf-C3HC4
CC_Bre1
zf-C3HC4_3
BRE1
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-rbx1
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
134069843
NCBI-ProteinID:
XP_062381947
LinkDB
All DBs
Position
22:24225663..24246634
Genome browser
AA seq
1005 aa
AA seq
DB search
MSGTGGGKRASGGDSPPGPPEKKSKKEEKTTTTLIEPIRIGGVSSTEEMDMKVLQFKNKK
LCERLEQRQVMEDELREKIEKLEKRQATDDTTLLIVNRYWTRLDENLQVLLQRVEPENPP
EPAPAPSSSAPEPAAPSPALAPELPPVPAPEPDTEPPPAPPPADGEEVPAPPQPPAPDEE
DRPQLPPQQDGLDQMATELPRVDGITAPPPPTPLSDTAKGFLATLDHCCEEELGLQLQDR
MQFSKSAVACVVCVFDRLHTNIEDLCARVQNAVCEDDNQREILAQNCSLLEENRRLQDLA
SSLQGKHHKVSMEYNELVDKVTGSETKVSEMETAVEDLQWDIEKLRNREQKLNKHLAEAL
EQLNSGYYSTGGSGGLPGGQITLSIQKFELLNAELEQNQELANSRMAELEKLQQELQEAV
RESEMLKMDLRNIPEEVVKETPEYKCLQSQFSLLYNESLSVKTQLDEARALLLTAKNAHL
RQIEHMESDELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINREMR
HLISSLQNHNHQLKGDVQRYKRKLRETQMEINKLRCQSGDSSGVLLLEEPASDGGGLEVK
KEEDEEQEDEEEERRRELERQRAREREREAERERERERERERQRSEEIKRKDSDTLKMLR
AELKKAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKAKAEVEELRVRVRELEERERK
ESKKLADEDALRKIRVAEETIEHLQKKLTATKQEEEALLSEMDVTGQAFEDMQEQNSRLL
QQLREKDDANFKLMSERIKSNQIYKLLREEKEELADQVLTFKTQVDAQLLVVQKLEEKEG
ILQTTLAALEKELAIRTQSLELNKRKAVEAAQLAEDLKVQLEHTQNKLREIQASVLDNRT
ARERESSNLKRAQEDLSRLRRKLEKQKKVEMYTDADEILQEEINQYKAKLRCPCCNTRDK
ETVLTKCFHVFCYECLKTRYDTRQRKCPKCNAGFGANDFHRIYIT
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcacaggtggagggaagcgtgcctcaggtggggacagtccccctggcccacct
gaaaagaagtccaagaaagaggagaagaccaccacgactctgatcgagcctattcgtatt
ggaggggtctcttccacggaagaaatggacatgaaggtcctccagttcaagaacaagaag
ctctgtgagcgactggagcagaggcaggtgatggaggatgaactgcgagagaagattgaa
aagttggagaaacgtcaggctactgatgacaccaccctgctcattgtgaaccgctattgg
acacggcttgatgagaaccttcaggtcctgcttcagcgtgtggagcctgagaaccctcca
gagcctgctccggccccgtcttcctcggcccccgagccagccgccccctctcctgccctg
gctcctgaactccctccagtgcctgctcctgagccagacacagagcccccgccggcaccc
cctccagcagatggggaagaggtgcctgctcccccgcagccccctgccccagacgaggag
gaccggccacagctgcctccacagcaggacggcctggaccagatggctacagaattgcca
cgggtggatggcatcacagcgccccctccccccaccccgctgagcgacactgccaagggc
ttcctggccacgctggaccactgctgcgaggaggagctgggcctgcagctgcaggaccgc
atgcagttcagcaagagcgccgtcgcctgcgtggtctgcgtcttcgaccggctgcacacc
aacatcgaggacctgtgcgcccgcgtccagaatgcagtgtgtgaggatgataaccagaga
gagatcctggcccagaactgctctctgctggaggagaaccggagactgcaggatctcgcc
tcctcgctgcagggcaagcaccataaagtgtccatggagtataatgagctggtagacaag
gtgactggctcggagaccaaggtgtctgagatggagacggctgtagaggacctgcagtgg
gacatcgagaagctgcgcaacagagagcagaagctcaacaagcacctggctgaggcgctg
gagcagttgaactcgggctactattccacaggaggctctggagggctccctggaggtcag
atcaccctcagcatacagaagtttgagctgctgaacgcagagctggagcagaaccaggag
ctggccaacagtcgcatggcggagctggagaagctgcagcaggagctccaggaggcggtc
agggagagcgagatgctcaagatggacctgcggaacattccagaagaagtggtaaaggag
acaccggaatacaagtgtttgcaatcacagttctctctgctgtacaacgagtctctgagt
gtgaagacccagctggacgaggcccgggcgctgttgctgaccgccaagaacgctcacctc
aggcagattgaacacatggagagtgacgagctgtccttgcagaagaagctccgcaccgag
gtcatccagctggaggacacgctggcccaggtgcgcaaggagtacgagatgctgcgcatc
gagttcgagcagaacctggcggccaacgagcaagcaggacccatcaaccgggagatgcgt
cacctgatcagcagcctgcagaaccacaaccaccagttgaagggtgacgtgcaacgctac
aagaggaagctgcgcgagacccagatggagataaacaagctgcgctgccagagcggggac
tccagcggcgtgctgctcctggaggagccggcgagcgacggcggcggcctggaggtgaag
aaggaggaggacgaggagcaggaggacgaggaggaggagcggcggcgcgagctggagcgc
cagcgggcgcgggagcgcgagcgcgaggcggagagggagcgggagcgcgagagggagcgc
gagcggcagcgcagcgaggagatcaagaggaaggactcggacacgctcaagatgctccgc
gccgagctcaagaaggcgcaggagtcccagaaggagatgaagctgctgctggacatgtac
aaatccgcccccaaagaacagcgggacaaggtccagctaatggctgccgagaggaaggcc
aaagctgaggtggaagagctgcgtgtccgtgtgcgtgagctggaggagagggagaggaag
gagagcaagaagctggcagacgaggacgccctgaggaagatccgggttgccgaggagacc
atcgaacacctgcagaagaagctcaccgccacaaaacaggaggaggaagccttgctgagc
gagatggacgtgacgggccaggccttcgaggacatgcaggagcagaacagtaggctgctg
cagcagctccgcgagaaggacgacgccaacttcaagctgatgagcgagcgcatcaaatcc
aaccagatctacaagctcctgcgcgaggagaaggaggagctggctgaccaggtgctcacc
ttcaagacccaggtggacgcccagctgctggtggtacagaagttggaggagaaggagggc
atcctgcagaccacattggccgccctggagaaggagctggccatccgcacgcagtccctg
gagctcaacaagagaaaggcggtggaggcggcccagctggctgaggacctgaaggtgcag
ctggagcacacgcagaacaagctcagggagatccaggcctccgtgctggacaaccgcacc
gcccgcgagagggagagcagcaacctcaaacgggcacaggaggatctgtccaggcttcgt
cgcaagctggagaagcagaagaaggtcgagatgtacacggacgcggatgagatccttcaa
gaggagatcaaccaatacaaggcgaagctgcgctgtccgtgctgcaacacgcgcgacaag
gagacggtgctcaccaagtgtttccacgtcttctgctacgagtgcctgaagacgcgctac
gacacgcgccagcgcaagtgccccaagtgcaacgccggcttcggggccaacgacttccac
cgcatctacatcacctag
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