Sardina pilchardus (sardine): 134069944
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Entry
134069944 CDS
T10667
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spil03021
]
134069944 (supt6h)
03036 Chromosome and associated proteins [BR:
spil03036
]
134069944 (supt6h)
Transcription machinery [BR:
spil03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
134069944 (supt6h)
Chromosome and associated proteins [BR:
spil03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
134069944 (supt6h)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
S1
S1_RRP5
HHH_3
HHH_9
MJ0788
Tex_N
Tex_YqgF
SH2
Motif
Other DBs
NCBI-GeneID:
134069944
NCBI-ProteinID:
XP_062382084
LinkDB
All DBs
Position
22:complement(17374396..17380616)
Genome browser
AA seq
1761 aa
AA seq
DB search
MSDFIESEAEESEEEFEEKDLKPRKTQKFTEDDEEEEEENAEDQDERGNLRGLINDDDDD
DEEEPGGSPAGSGSGSDSGEEVRRRKKRTYDDYLDEDDLDLIEENLGVKVKRRKKRFERL
RNMDDDEEDDEKDLIADEIFTGDGDGDGEVEDGEPVDVQLAHAGEEEEEEDEESDIDDFI
VDDDGQPLRKKKGKKFSGYTDAALQEAQEIFGGDFDYSDFDAEPFDQGEEEEDDQEDENW
DRPKKQVKRKTGRRSIFDVYEPSELESSHMTDQDNEIRSTDMPERFQLRTIPVKPAEDDE
LEEEAEWIFRNAFSNSTISMQDSTDYLNPGSNPTFSYKQPQTVSKIKEALNFMRNQHFEV
PFIAFYRKEYVEPELNINALWKVWQWDAKWTHLRTRKENLTRLFNKMQSYQFEQISADPD
KPLADAVRPLDTADLTRLKDVQSFDELRDVYQHFQLYYGQDIPRMQNAAKTVKKKITKIK
KIITDEDGEEEEEEEEIEEEEEHKGPVLKMATRRDMYSICQRVGLDGLAKKFGLTPEQFG
ENLRDSYQRHETEQFPAEPLELAKDYICAQFSTPEAVLEAARYMVGLQIAREPLVRHVIR
QTFQERAKINIKPSKKGKKDIDEAHYAYSFKYLKNKPVKELTGEQFLKMGQAEEEGLLTM
DINIDLMGVSGYGGDPTYFDEIKQFYYRDEFSHQVQEWNKQRAMAIEQALKQFLYPQMTK
ELKFKLITEAKDHIIRSCCKKLCNWLKVAPYRPEQQMEEDDDLMDETQSKGIRVLGVAYA
GGRDNPVFCCLINGEGEVIDFLRLPNFLKRRNAWNEDEREKKLNDIENLKKFLLSKKPHV
VAVTAENRDSQMILEDIKRTLQELEQDSSLPAVGVELVNNDLATLYMNSTKSEADFRDYP
PLLRQAVSVARQIQDPLVEFAQVCSSDDDILCLKLHPLQEQVDKDELLTALYREFINRVN
EVGVDVNRAIAHPYTQSLVQYICGLGPRKGSHLLKILKQNNTRLENRTQLVTMCHMGPKV
FINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAG
ALEEILDNPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRAQYRSPNSE
QVFNMLTKETPESFYIGKLITCVVTGIAHRRPQGESYDQAIRNDETGLWQCPFCRQDNFP
ELSEVWNHFDSGSCPGQAIGVRSRMDNGVMGFIPTKFLSDKVVKHPEERVKVGMTVHCRI
MKIDIEKFSVDLTCRTSDLMDKNNEWKLHKDVYYDFDAETEEAKRDEDLKKKNQRTTYIR
RVIAHPSFHNINFKQAEKMMETMDMGDMVFRPSSKGESHLTLTWKVGEGIYQHVDVREEG
KENAFSLGHKLWINNEEYEDLDEITARFIQPMAAFARELLYHKYFQDCEGGNRKKMEEIL
VKSKREKPTFIPYYISACKELPGKFLLGYQPRGKPRIEYVSITPDGFRYRSRVFPTVNGL
FRWFKDHYHEPVPGVTPSSGSRTQTPASVNATPANINIADLTRAVSALPPNMTSQMFNAI
AAVKAQGQNANTTPAQWGSSQYAYSGGGGSTGGGGGSSSAYHVFATPQQPMATPNYQMTS
PSYMAGFITPEIQAVPTPRYPGATPQSSYGDHASSKSSSSSHSRSSHHHHHHQQQPPQQQ
SSSQQQQQQQTQQQAPPQPKQSNTAVDWAKMAEQWRQEKEAEQRKQKTPRMTPRPSPSPM
IESTPMSIAGDATPLLDETDQ
NT seq
5286 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacttcatagagagtgaggctgaagagtcggaggaagagtttgaggagaaagac
ttgaaacctcgaaagactcagaaattcacagaggatgatgaggaggaagaagaggaaaat
gcagaagatcaagatgagcgtggaaacttgcgcgggctcatcaacgacgacgacgacgat
gatgaagaagaaccaggaggtagtcctgcaggcagtggcagcggcagcgattcaggtgaa
gaagtccgtcgccgtaagaaacgtacctatgatgattacttggacgaagatgacctcgat
ctcattgaagagaacttgggtgtcaaagttaagagaagaaaaaagaggtttgaacgtctt
agaaacatggacgatgacgaggaggacgatgagaaggatttaattgctgatgaaatcttc
actggtgatggagacggtgatggggaggttgaggacggcgagccagtggatgtgcagttg
gctcatgcaggtgaggaggaagaagaagaggatgaagaatccgacattgatgactttata
gtggatgatgacggccagccactgagaaagaaaaaaggcaagaaattctcgggctacaca
gatgcggccctacaggaagcccaggagatctttggtggcgattttgactactctgacttt
gatgctgagccttttgaccagggtgaagaggaggaggatgatcaggaggatgagaactgg
gacaggcccaaaaagcaggtgaagaggaaaacgggtcgccgcagcatctttgacgtctat
gagcctagtgagttggagagcagtcacatgacagaccaggacaatgagatccgaagcaca
gacatgccagagagattccagctgcgtaccattcctgtgaagcccgctgaggacgatgag
ctagaggaggaggcagagtggatcttcagaaacgccttctctaactccaccatctcaatg
caagacagcacagactacctgaaccccggctcaaaccccactttcagctacaaacagccc
cagactgtcagcaagattaaagaggccctgaacttcatgaggaaccagcacttcgaggta
ccctttattgcattctacagaaaagagtatgtggagccggagctaaacattaacgcattg
tggaaagtctggcagtgggatgcaaagtggactcacctgagaacacgtaaggagaatcta
acccggctcttcaataaaatgcagtcgtatcagtttgagcaaatttctgctgatcccgat
aagccactggctgatgcggtccgcccactggacactgcagacctgacaagactcaaagac
gtccaatcctttgacgaactcagagacgtttaccaacacttccaactgtattacgggcag
gacatccctaggatgcagaatgcagccaaaactgtgaagaaaaaaataacaaagattaag
aaaatcattactgatgaggacggcgaggaagaggaggaggaggaggagatcgaggaggag
gaagaacataagggcccagtgttaaagatggccacccgcagagacatgtacagcatctgt
caaagagttggtctcgacggactcgccaagaaattcggtctgacacctgagcagttcggt
gagaacttgcgtgacagctaccagcggcacgagacagagcagttccccgccgagcccctg
gagttggccaaagactacatctgcgcgcagttcagcacaccagaggcagtgctggaagcc
gcgcgctacatggtaggcctccagatcgcccgcgagcctctagtcaggcatgtgatcagg
cagaccttccaggagagggcaaagatcaacatcaaacccagcaaaaagggcaaaaaggac
atagacgaggcccactatgcctactctttcaaatacctaaaaaacaagcctgtgaaagag
ttgactggagaacagtttctgaaaatgggccaggctgaggaagaaggcctgcttaccatg
gacatcaacatcgacctaatgggcgtcagcggctacggcggtgacccgacctacttcgac
gagatcaagcagttctactacagggacgagttcagtcaccaggtgcaggagtggaacaag
cagcgtgccatggccatcgaacaggccctgaagcagttcctgtacccgcagatgaccaag
gagctcaagttcaagctcatcacggaggctaaggaccacatcatccggtcgtgctgcaag
aagctgtgcaactggctgaaagtggcgccctatcgtcccgagcaacagatggaggaggac
gacgacctgatggacgagacgcagagcaagggcatccgggtgctgggcgtggcctacgcc
ggcggcagggacaacccggtgttctgctgcctcatcaacggcgagggagaggtcatcgac
ttcctgcggctgcccaacttcctgaagaggaggaacgcctggaacgaggacgagcgggag
aagaagctgaacgacatcgagaacctgaaaaagttcctcctcagcaagaagccgcacgtg
gtggccgtcaccgctgagaaccgcgactcgcagatgatactggaggacatcaagcgcacg
ctgcaggagctggaacaggactcctccctgcccgccgtcggggtggagctcgtgaacaac
gacctggcgacgctctacatgaacagcaccaagtccgaggcggacttccgcgactacccg
ccgttgttgcggcaggccgtgtccgtggcccggcagattcaggaccccctggtggagttc
gcccaggtgtgcagcagcgacgacgacatcctctgcctcaagctgcaccccctccaggag
caggtggacaaggacgagctcctgacggcgctctaccgcgagttcatcaaccgggtgaac
gaggtgggcgtggacgtgaaccgcgccatcgctcacccgtacacgcagagcctggtgcag
tacatctgcggcctgggccccaggaagggctcgcacctgctgaagatcctgaagcagaac
aacacccggctggagaaccgcacgcagctggtcaccatgtgccacatgggccccaaggtc
ttcatcaactgcgccggcttcatcaagatcgacacggcctcgctgggcgacagcaccgac
tcctacatcgaggtgctggacggctcgcgcgtccaccccgagacgtacgagtgggcgcgc
aagatggccgtggacgcgctggagtacgacgagtcggcggaggacgccaacccggccggc
gcgctggaggagatcctggacaatcccgagcggctcaaagacctcgatctggacgccttc
gccgaggagctggagcgccagggctacggcaacaagggcatcaccctttacgacatccgc
gccgagctcagctgcaggtacaaggacctgcgggcgcagtaccggtcgcccaactccgag
caggtgttcaacatgctgaccaaagagacgccggagagcttctacatcggcaagctcatc
acctgcgtggtgacgggcatcgctcaccgacgcccgcagggcgagagctacgaccaggcc
atccgcaacgacgagacgggcctgtggcagtgcccgttctgtcgccaggacaacttcccc
gagctcagcgaggtgtggaaccacttcgacagcggctcctgccccggccaggccatcggc
gtgcggtcgcgcatggacaacggcgtcatgggcttcatcccgacaaagttcctcagcgac
aaggtcgtgaagcaccccgaggagcgggtcaaggtcggcatgacggtgcactgccgcatc
atgaagatcgacatcgagaagttcagcgtggacctcacctgccgcacgtccgacctgatg
gacaagaacaacgagtggaagctgcacaaggacgtctactacgacttcgacgccgagacg
gaagaggcgaagcgggacgaggacctgaagaagaagaaccagaggaccacctacatccgc
cgcgtcatcgcccacccgtccttccacaacatcaacttcaagcaggccgagaagatgatg
gagaccatggacatgggcgacatggtgttccggccgagcagcaagggcgagagccacctg
acgctcacctggaaggtgggcgagggcatctaccagcacgtggacgtgcgcgaggagggc
aaggagaacgccttcagcctgggccacaagctgtggatcaacaacgaggagtacgaggac
ctggacgagatcacggccaggttcatccagcccatggcggcgttcgcccgcgagctgctc
taccacaagtacttccaggactgcgagggcggcaaccggaagaagatggaggagatcctg
gtcaagtcgaagcgcgagaagcccacgttcatcccttactacatctcggcctgcaaagag
ctgccgggcaagttcctcctcggctaccagccgcgcggcaagccgcggatcgagtacgtc
tccatcacccccgacggcttccgctaccgctcgcgcgtcttccccaccgtcaacgggctc
ttccgctggttcaaggaccactaccacgaacccgtgcccggcgtcacccccagcagcggc
agccggacgcagacgccggcctcggtcaacgccacgccggccaacatcaacatcgccgac
ctgacgcgggcggtcagcgccctgccgcccaacatgacctcgcagatgttcaacgccatc
gcggcggtcaaggcccagggccagaacgccaacaccaccccggcccagtggggctccagc
cagtacgcctacagcggcggcggcggcagcacgggcggaggcggcggcagcagcagcgca
taccacgtcttcgccacgccgcagcagcccatggccacgcccaactaccagatgacgtcg
cccagctacatggcgggcttcatcacgcccgagatccaggcggtgcccacgccgcgctac
ccgggcgccacgccgcagtcgtcctacggcgaccacgcctcgtccaagtcgtcctcgtcg
tcccacagccgctcgtcgcaccaccaccaccaccaccagcagcagccgccgcagcagcag
tcgtcgtcgcagcagcagcaacagcagcagacgcagcagcaggccccgccgcagcccaag
cagagcaacacggcggtggactgggccaagatggcggagcagtggcggcaggagaaggag
gcggagcaacgcaagcagaagacgccgcgcatgaccccgcgaccctcgcccagccccatg
atcgagagcacgcccatgtccatcgccggcgacgccacgcccctgctggacgaaacagac
cagtag
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integrated database retrieval system
