Sardina pilchardus (sardine): 134070142
Help
Entry
134070142 CDS
T10667
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03020
RNA polymerase
spil04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
134070142 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
134070142 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spil03021
]
134070142 (polr3a)
Enzymes [BR:
spil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
134070142 (polr3a)
Transcription machinery [BR:
spil03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
134070142 (polr3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
134070142
NCBI-ProteinID:
XP_062382380
LinkDB
All DBs
Position
22:complement(9957352..9992231)
Genome browser
AA seq
1391 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDTSHTPLSHGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYLDLELPCFHVGYFKAIIGILQMICKTCSHIMLSKE
EKLQFMDHLRRPGLVYLQKRGLKKKISDKCRKRTVCLNCNAFNGPVKKCGLLKILHEKYK
TTKKVVDPIVSDFLQSFDIAIEHNKEVEALLTRAQENLNPLVVQNMFRRIPAEDVPLLLM
NPESGKPADLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMTG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPIHVAKILTYPEKVNKANIELMRKLVKNGPELHPGANF
IQQRHNQMKRFLRYGNREKMAQELKFGDVVERHMIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRSKACQIVASILVGKDEKVKISLPRPAIMKPLNLWTGKQI
FSLILKPSAACPVKANLRTKGKQYSGKGEDLCSNDSFVVIQNSELMCGSLDKGTLGSGSK
NNIFYILLRDWGQMEAANAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLNAKQELLDAG
YKKCDEYIEALNTGKLQPQPGCTPEETLEALILRELSVIRDHAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFDKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRCVYACPSEPALSRNELVLTAESIMKKSDFMC
CRDTFLDEIKKFIKSVSEKIKKTRDKYGINDNGTTEPKVLYQLDRITPTQLEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNI
STPIITAHLDVEDDADFARLVKGRIEKTLLGEISEYIEEVFLPDDTFILVKLSLERIRLL
RLEVNAETVRYSICMSKLRVKPGDIAVHGEAVVCVSPRENSKSSMYYVLQSLKQDLPKVV
VQGIPEVARAVIHIDDQSGKQKFKLLVEGDNLRSVMATHGVNGSRTTSNNTYEVEKTLGI
EAARTTIINEIQYTMSNHGMSIDRRHVMLLADLMSYKGEILGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHRADKDPNPPRRPLLFD
NPEFHIPLVTP
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggaacaatttagagagacggatgtggccaaaaaaataagccacatctgtttt
gggatgaaatctgcggaacagatgaggcagcaggctcatatccaagtggtcagcaagaac
ctgtacagccaggacaccagtcacacgccactctcccatggagttctggaccatcgcatg
ggcacgagtgaaaaggaccgaccatgtgaaacgtgtggaaagaatttggccgattgtctg
ggtcactacggatacttagacctggaactgccctgctttcatgttggatacttcaaagcc
atcataggaatcttgcagatgatctgtaaaacgtgttcccatatcatgctgtctaaagag
gagaagcttcagttcatggaccacctcagaaggcccggtctggtctaccttcagaaacgc
ggcctgaagaagaagatctcggacaaatgcaggaagagaacagtctgccttaactgcaat
gcattcaatggtccggtgaagaagtgtggactgctgaagattcttcatgagaaatacaag
actactaagaaggtggtggaccccatagtgtcagactttctgcagtccttcgacattgcc
atcgagcataacaaggaagtggaggctctactaacacgggctcaagagaacctcaacccg
ctggtggtgcagaatatgttccggaggattccggcggaggacgtgccactgctgctaatg
aacccagagtcggggaagccggccgacctcatcctgacccggctactggtgccaccactc
tgcatccggccctcggtggtcagcgacctcaagtccggcaccaacgaggacgacctcacc
atgaagctcacagagataattttcctcaacgacgtcatcaagaagcatcgcatgacgggt
gcgaagacccagatgatcatggaggactgggacttcctgcagctgcagtgtgccctgtac
atcaacagtgagctctcgggcatccccctcaacatggcgcccaagaagtggaccaggggc
tttgtgcagagactcaagggcaaacaagggcgtttccgtggaaacttgtcgggaaagcga
gtggatttctccggcagaacagtcatctcccctgaccccaacctgcggattgatgaagtg
gctgttcccatccatgtcgccaaaattctgacctacccagagaaggtgaacaaagccaac
atcgagctgatgagaaagctggtgaagaacggacctgaattgcaccctggggccaacttc
attcaacagagacacaaccagatgaagagattcttgaggtacggtaaccgtgagaagatg
gcccaggagctgaagtttggcgacgtggtcgagagacacatgatcgacggcgacatcgtg
ctcttcaaccgacagccctctctgcacaagctcagcatcatggctcacatcgcgcgcgtg
aagcctcacaggacgttccgctttaacgagtgcgtgtgcacgccgtacaacgccgacttc
gacggcgacgagatgaacctccatcttccccagacggaggaggccaaggctgaggccctg
gtgctcatggggacaaaagccaacctggttacaccgagaaacggagagccgttgattgca
gctattcaggacttcctaacaggagcttacttgctgaccctgaaggacaccttctttgac
cggtccaaagcctgccagatcgtggcctccatcctcgttggcaaagatgagaaggtcaaa
atatccctgcctcgccctgccatcatgaagccgctcaatctgtggacggggaagcagatc
ttcagcttgatcctgaagccaagcgcagcctgtccagtcaaagccaacctgcgcaccaaa
ggcaaacagtacagtggcaaaggagaagacctgtgctccaacgactcgttcgtggtgatc
cagaacagtgagctgatgtgcggtagcttggacaaaggcacgctgggctccggctccaag
aacaacatcttctacatcctgctacgtgactggggccagatggaagcggccaatgccatg
tcccgcctggctcgcctcgcccccgtctacctgtccaacaggggcttctccatcggcata
ggtgacgtgactccaggtcaggggctgctgaatgccaagcaggagctgctggacgccggc
tacaagaagtgtgacgagtacatcgaggccctgaacaccggcaagctccagccgcagcca
ggctgcacacctgaggagacgctggaggccctgattctgagagagctgtctgtcatcaga
gatcacgcaggtagcgcatgtctcagagagctggacaaaagcaacagtcctctcatcatg
gccctgtgtggctccaaagggtctttcatcaatatctctcagatgatcgcctgtgtcggt
cagcaggccatcagtggctcccgtgtgcctgatggcttcgagaaccgctccctgcctcac
tttgacaagcattcgaagctccccgccgccaagggctttgtggcggacagtttctactct
gggctcacccccaccgagttcttcttccacacaatggccggcagagagggcctggtggac
accgctgtgaagacggccgaaactggatacatgcagaggcgtctggtgaagtccctggag
gacctctgctcccagtacgacctgacggtgcgaagctccacgggcgacatcatccagttc
atctacggcggcgacggcctcgaccccgccgccatggagggcaaggacgagcccctggag
tttaagagagtcctcgacaacatcaggtgtgtgtacgcctgcccaagcgagccggccttg
agcaggaacgagctggtgctgaccgccgagtccatcatgaagaagagcgacttcatgtgc
tgccgggacaccttccttgatgaaataaagaaattcattaagagtgtctctgagaaaatc
aagaagacccgtgacaaatatggcatcaatgacaacggcaccactgagccaaaggtcctc
taccagctggacaggatcactcccactcagctggagaagtttctggagacatgcagggac
aagtatatgagggctcagatggagccgggctcggcggtgggcgccctctgtgcgcagagc
atcggggagccgggcacgcagatgaccctcaagaccttccacttcgccggcgtggcctcc
atgaacatcacgctgggcgtgccccgcatcaaggagatcatcaacgcctccaagaacatc
agcacaccgattatcaccgcccacttggatgtggaggatgacgcagacttcgctcggctg
gtcaaaggccgcatcgagaaaacgctgctgggcgagatctcggagtacatcgaggaggtg
ttccttccagatgacaccttcatcttggtgaagctctcactcgagaggattcgacttctg
cgcctggaggtcaacgctgagacggtgcgctactccatctgcatgtccaagctgcgcgtg
aagccgggcgacatcgccgtgcacggggaggcggtggtgtgcgtgtcgccgcgcgagaac
agcaagagctccatgtactacgtgttgcagtcgctcaagcaggacttgcccaaggtggtg
gtgcaaggcatccctgaggtggcccgtgctgtcattcacatcgacgaccagagcggcaag
cagaagttcaagctgctcgtggagggagacaacctccgcagtgtcatggcaacccacggc
gtcaacggcagccggacgacctcgaacaacacttacgaagttgagaagacccttggcata
gaagctgcccgcaccaccatcatcaacgagatccagtatacgatgagcaaccacggcatg
agcatagaccggcggcacgtcatgctgctcgctgacctcatgtcctataagggcgagatc
ttgggaatcacccgcttcggtctggctaaaatgaaggagagtgttctgatgctggcgtcc
tttgagaagacggccgatcacctgttcgacgccgcctacttcggccagaaggactctgtc
tgtggtgtgtccgagtgcatcatcatgggcattccgatgaacatcggaaccggcttgttc
aagctgctccatcgagcagataaagaccccaacccgccccgcagacccctgctcttcgac
aaccccgagttccacatccccctggtgaccccctaa
DBGET
integrated database retrieval system
