Sardina pilchardus (sardine): 134070305
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Entry
134070305 CDS
T10667
Symbol
xrcc6
Name
(RefSeq) X-ray repair cross-complementing protein 6
KO
K10884
ATP-dependent DNA helicase 2 subunit 1
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
134070305 (xrcc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spil03041
]
134070305 (xrcc6)
03400 DNA repair and recombination proteins [BR:
spil03400
]
134070305 (xrcc6)
Spliceosome [BR:
spil03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
134070305 (xrcc6)
DNA repair and recombination proteins [BR:
spil03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
134070305 (xrcc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_C
SAP
Fan1_SAP
Rho_N
SAP_new25
VWA
Motif
Other DBs
NCBI-GeneID:
134070305
NCBI-ProteinID:
XP_062382604
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All DBs
Position
22:23931803..23938381
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AA seq
610 aa
AA seq
DB search
MAEWNAYYRNEDEEVEQEEGDEGAVDYKNTGRDSLVFLVDASKEMFIKGEDGELSNFDMT
MECVRSVYMSKIISSDRDLVALVFYGTKKCKNPRESFKHVYIYHDLDSPGARRVHDIDNL
RGEKGAQLAAEVMGSGETSLGDALWCCSNLYSDIKLRLSHKRLMIFTCRDSPHGDDGNRD
RTARTKASDLRETGVIIDLMHLKKQGGFDVGQFFCDIVSPPEDESELGLHLEPCGKLEDL
QKRVRAKDMKKRAQCRLTFSLGDGMKLAVGVYVLARTATKPPSVLLYRDTNEAVRTKTRL
FHTNTGSLLLPSDTKRAQVYGQKQIVMEKDEVDEMKKFDDPGLVLIGFKPMSKLKVHHHI
KPSVFIYPEEDQVSGSSCVFAALLRRCSERNLFAVCRYIPRRNTPPRFVALVPQREELDQ
GQAQISPPGFHAIFLPYADDIRTLDVPECPTATGEQTDKMKEIVHKLRFKYRCDAFENPV
LQKHFRNLEALALDLMQPEDIEDFTMPKVEMMDERLGPLAQEFKDLVYPADYNPEGKPAA
KRKTADAGGGAEKKPKVEVSQEELRAHVEKGTLGKLTVPVLKEACKAFGVRTTGTKKQEL
IDALTASITK
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatggaacgcatattatcggaatgaggatgaggaggtggaacaagaggaaggc
gatgagggcgcagtcgattataaaaacactgggcgtgacagccttgtcttcctggtggac
gcgtccaaagagatgtttataaagggggaggatggagaactttccaactttgacatgaca
atggagtgtgtgcgaagtgtctacatgagtaagatcatcagcagcgatcgagacctggta
gcactggtgttctatggcacaaagaagtgcaaaaaccccagagagtcctttaagcatgtt
tacatctaccacgacctggactcaccaggggcccgtagggttcatgacatcgacaacctg
cgaggggagaagggtgcccagctggctgctgaggtgatgggcagtggggagacgtccctg
ggcgatgcgctctggtgttgctctaacctgtacagtgacatcaagctgcgcctctcccac
aagcggctgatgatcttcacctgccgagactcccctcacggcgatgacggcaaccgagac
aggactgcgcgcactaaggcctctgacctcagagaaactggtgtgatcatagacctgatg
cacttgaaaaagcaaggtggatttgacgtcggccagttcttctgcgacattgtgagccct
cctgaggatgagagtgagctgggcctgcacttggagccgtgtgggaagctggaggaccta
cagaaaagagtccgcgccaaagacatgaagaagagagcccaatgcaggcttacattctct
ttgggagatggtatgaagttggccgtgggtgtatatgtgttggcaaggactgccaccaag
cccccctctgtcctgctgtacagagacacgaatgaagctgtgcggaccaagacccgtctc
ttccacacaaacactggtagtcttctgttgcccagcgacacaaagagggcccaggtctat
ggacaaaagcagatagtgatggagaaggatgaggtggatgagatgaagaagtttgatgat
ccaggtctggttctcatcgggttcaagcccatgagcaagctgaaggtgcaccaccacatc
aagccttccgtgttcatctaccccgaggaggatcaggtctcaggaagctcctgtgtgttt
gcagctctgctgcgtcgctgcagcgagaggaacctgtttgccgtgtgccggtacatcccc
agacggaacaccccacctcgctttgtggccctggtgccccagagagaggagctagaccag
ggccaggcccagatctctcccccaggtttccatgccatcttcctgccttatgctgatgat
atacgcaccctggatgtacctgagtgtcccacggcaacaggcgaacagacagacaaaatg
aaagagattgtgcacaaacttcgcttcaagtacagatgtgatgcattcgaaaatccagtg
ctgcaaaagcacttcagaaacttggaggctttggccctggatctcatgcagccagaagat
attgaggacttcaccatgccaaaagtcgaaatgatggatgagcgccttggaccgcttgct
caagaatttaaggatcttgtttaccctgctgactacaacccagaaggaaaacccgccgcc
aagcgaaaaaccgctgacgcaggaggaggggctgagaagaaacccaaagtggaggtgtct
caggaggagcttcgtgcccatgtagagaagggtaccctgggaaaacttacagttcctgtg
ctgaaggaggcctgcaaggcctttggagttcgcaccacaggaacaaagaaacaggaacta
attgatgccctcacagcaagcataaccaaataa
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