Sardina pilchardus (sardine): 134070316
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Entry
134070316 CDS
T10667
Symbol
wdr90
Name
(RefSeq) WD repeat-containing protein 90
KO
K24759
WD repeat-containing protein 90
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
spil03037
]
134070316 (wdr90)
Cilium and associated proteins [BR:
spil03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
134070316 (wdr90)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
CFA20_dom
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_LRRK2
Beta-prop_Nup120_160
Beta-prop_NWD2_C
Beta-prop_SPT8
Cytochrom_D1
WDR54
SGL
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
134070316
NCBI-ProteinID:
XP_062382614
LinkDB
All DBs
Position
22:complement(20190087..20224851)
Genome browser
AA seq
1833 aa
AA seq
DB search
MSSRAWQHPYVNIFKHVRVEEWKRSSREGDVTSYMDKTLKCSVFRIRGSVPASNYILLPK
SSSQSLGLTGRYFYLLFRPSPGKHFVVHLDVVAEEGQVIRVSFSNMFKEFKSSSTCLQLP
FICGSAQGSVYESTAHTAKQGLVGPAPTCVRWVCLVMDLRYLVSVYLNRRYSHLKALKLC
ANMSVKNTMTSDLLLDPGVCYSVVKRGGVVMEEGTAPMPREMSFPLPKGCTWHDLYDYIR
FPSDGLKMPFDSIQKGATNQAKTDVRGSPDRQESLCVDLSKPVRDRVSLIQQITTPRPRL
KQKKVTLLTPSLPEVAPLSTAGAGGDGGCVDDGGVHVFAPPLDQHQDVITVRSPVSQPHS
PLLEVMAAEVSRPISLPASKASKQASKQRKLHPDPILHLNKIIGFGGKTMKNVVWNRLGD
EVLYPCHAVIIAMKIGSGKQRFFIGHTDKVSALALNGGCSLLASAQADTHTLLRLWSYET
GQCLALVNTHAHSLSILSFSYSGRVLCGVGKDGHNKTILVVWNTESVTQKGVVCVLGKAH
TDVDIRALQITCCDETRMVSCGLGNVRLWRLRGGALRSCPLNLDQFHSLEFTDLDLLHSH
TADAAEEHTLFVSSRSGHVLEVDYAAVAIRNVRRLLPTQPSHAQRREKHTFSTGPGIAVN
SISVCEAFCATASEDGYLRLWPLDFSAVFLEAEHEGPVCHVCISDDGLKVLASTSIGSLG
YLDVASRGYSTLMRSHTHTVLGFSIDGLRRHITTASSDGTVRVWDMDSMQQLYDFLSEDT
PSSVAFHPSLPVFCCGSSSGRIRVFNITSASMLAQHRKHTEAVVGCVFSPDGECLFSGGA
DGSLALYNSAHQELPAIRVLGNVLARGSERAPDALVVSGDSSRLAFIGPTQHTVTIMDAR
SLDEMLRVDVSILDLDSPKLDCALKVCFSPPKPGHLLISTSANKILYVNTHTGKLLKEVC
DVQKKCCWSLAVSEDSRFLLTAGCNTLKVWDYNMSLDVNSQVFIGHSEPIKQVSFTPDQM
GVVSVGDALFFWDFLAHPQEAMLRSPAILVSPPKPGPSGDSGALTNGLRLSAGMPRGPAP
LPSFDLSSIERPAHDALEDLSLNEDAHDALRRSPSPSPAPSPTPKHASFLRVTDRSASRA
SPDKPANQLRENDFGTSSKAERPDCYKHFTPRYNASTPEQNNVAPPPGEEGLRLKAVIGY
NGNGRGNMVWNPDTGLFVYTCGCVCVVENLHTGSQRHWLGHTEEISTLAISHDAQLVASA
SGSGASSKSLICIWNVTDGSRRTSMSFHKGAVQSMAFARDDRYFLSVGDFSEQEVALWSG
SCFELLCRVTAPWALHEARFSPAIDGLLACVGASGTLFCTIHTQGMQTELQVQSVCVPDD
VGDAELTSLCFNANGLLFTGTSGGQVCVWDCNTHRCFMSWEADEGEIGVLLCCGNRLVCG
SNSRRLRLWSVAAAQALRAQDAERSQDSPAVLLEQEMQLDGAVVSATFDDVMDMGIVGTT
TGTLWYINWTESTSIRLINGHKSKVNGVLFSPDESRFATCGQDGSLRVWTSPSNELLVQF
QVLNQSCECVCWNPGSSVTAVCVSGGYSDGTVRVFNLNSSEMELKLQPHATAVSALQYSC
HGLVLLSAGRDGVIAVISPVTGATLRIISDHKGAPITAMQSVKKQYKEFGLQGDELWLAV
SADRRVSVWAADWKKDKCELLDWLSFPAPAAPEYGEVLPPSLAAFSPCERGVLVYTGYGV
TKELTFYCLNKKQVLRTISLSDWALSLSLCSKERLLAVGSKHRVMKLLHSSSGRFQDFTP
HGDSVQLCCFSPSGKQLLTCAHNEILLWSTHSL
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaagagcctggcagcatccttatgtcaacatcttcaaacatgtgcgcgtggag
gagtggaagagatctagcagggagggagacgtcacctcctacatggacaaaaccctcaag
tgctccgtgttccggatccgtggctcggttccggccagcaactacatcctgctgcccaag
agcagcagccagtctctgggcctgactgggcgctacttctacctgctcttccggccctct
ccagggaaacacttcgtggtgcacctggacgtggtagcagaggagggtcaggtgatccgg
gtgtctttctccaacatgtttaaggagttcaaatccagctccacctgcctgcagctcccc
ttcatctgcggctcagcacagggctctgtgtacgagagcacggcacacacggccaaacaa
ggtctggtgggacctgctccgacgtgtgtgcgctgggtgtgtttggtgatggacctgcgt
tacctggtctctgtctacctgaaccgtcgctacagccacctcaaggcactgaagctgtgc
gccaacatgagcgtgaaaaacaccatgaccagcgacctgctgctggacccaggtgtgtgc
tactcggtggtgaagcgtggtggtgtggtgatggaggagggcactgccccgatgcccagg
gagatgagcttccctctgcccaagggctgcacctggcacgacctctatgactacatcagg
ttcccctctgacggattgaagatgccatttgattccattcagaaaggcgcaactaaccaa
gcaaaaactgatgtccgtggtagcccggataggcaggagagcttgtgtgtggacctcagc
aaacctgttcgcgacagagtctctctcatccagcagatcaccactcccagacctcggctg
aagcagaagaaggtgaccctgctgaccccgtctctgcctgaggtggcgccgctgagcacg
gcgggggcggggggagatggcgggtgtgtggacgacggaggggtgcacgtgttcgccccg
cccctggaccaacaccaagacgtcatcactgttcgctcgccagtctcacagccccactcg
ccactgctggaggtgatggctgctgaagtgtcccgtcccatctctttgcctgcctccaaa
gccagtaaacaagccagcaagcaacggaagctgcaccctgacccaatactacatctgaat
aagatcatcggatttggaggcaaaaccatgaagaatgtggtgtggaacaggctgggcgac
gaggtcctctatccctgccacgccgtcattatcgccatgaagatcggctctgggaagcag
cgctttttcatcggtcacacagataaggtctccgctctggcgctgaatggcggctgctct
ctcctggcgtcggcgcaggcggacacacacacactgctgcgcctgtggagctatgagacg
ggccagtgtctggccctggtcaacacacacgcacactccctcagtatcctcagcttctcc
tacagtggaagggtcttgtgtggagtggggaaggatggacacaacaaaactatacttgta
gtatggaacacagagagtgtgacccagaagggagtagtgtgtgtcctgggtaaagcacac
acagacgtggacatccgagctcttcagatcacctgctgtgatgagacccggatggtgtcg
tgtgggttgggaaacgtgcgcctgtggcggttgaggggcggtgctctgcgctcctgtcca
ctgaacctggatcagttccacagcctggagttcacagacctcgatctgctgcactcacac
actgcagacgcagctgaagaacacacactgtttgtgagcagtaggagtggccacgtgctg
gaggtggactacgctgctgtggccatcaggaacgtcaggagactcctccccactcagcca
agccacgcccagcgccgagagaagcacactttcagcacaggtccaggtattgcagtgaac
agcatcagtgtgtgtgaggcattctgtgccactgcatctgaggatggctacctgaggctc
tggcccctcgacttcagcgcagtcttcctggaggcagagcacgaggggccggtgtgtcac
gtgtgcatctcggacgatggcctgaaggtgctggcgtccaccagcatcggcagcttgggc
tacctggacgtggctagccgcggttacagcacgctgatgcgctcgcacacgcacacggtg
ctcggcttcagcatcgacggcctccgccgccacatcaccaccgcctccagcgacggcacc
gtgcgcgtctgggacatggactccatgcagcagttgtatgacttcctgtctgaggacact
ccatcctcggtggcgttccaccccagcctccccgtcttctgctgtggctccagctccgga
cgcatccgcgtcttcaacatcacctccgccagcatgctggcccagcaccggaagcacacc
gaggcagtcgtgggctgtgttttctctcctgacggagagtgcttgttcagtggtggcgct
gatggatccttggccctttataattcagcacaccaggagcttccagccatccgggtgctg
ggtaatgtgttggcacgaggctcagaacgtgcccctgatgcattggttgtcagcggcgac
agctccaggctggcattcatcggccccacacagcacaccgtgaccatcatggatgcccgc
tcacttgatgagatgttgcgtgtggacgtcagcatcctggacttggacagccccaaactg
gactgtgctcttaaggtctgcttttctcctcccaaaccgggacacctgctcatctccacc
tccgcaaacaagatcctttacgtcaacacacacaccggcaagctgctgaaagaggtgtgc
gatgttcaaaagaagtgctgctggtcgctagcggtcagtgaggatagccggttcctcttg
accgctgggtgtaacacactaaaggtctgggactacaacatgagcctggacgtcaactcc
caggtgtttattggccactctgagcccatcaagcaggtgagcttcacacctgatcagatg
ggtgtggtctctgtgggcgacgccctcttcttttgggacttcctggcacaccctcaagaa
gcaatgctacggtctcctgccatcttggtgtctcctcccaaaccaggcccatcaggtgac
tcgggggcgttgaccaatggattgcggctgtccgctgggatgccccgaggcccagctccc
cttccctcgttcgacctgagctctattgagaggccagctcacgatgcactggaggacctt
tctctaaatgaggacgctcacgatgccttacgacgtagcccctccccttcgccggctccc
agccccacccccaaacacgcctccttcctccgggtcactgataggtcagcgagcagagcc
tctccagacaagccagccaatcagctgagagaaaacgactttgggacctcctcaaaggcg
gagcgtccggactgctacaaacacttcacaccacgttacaacgcctccaccccagagcag
aataatgtggcccctccccctggagaggagggactgagactgaaagctgtgattggctat
aatggcaacgggcgtggcaatatggtgtggaaccctgacacaggtctgtttgtgtacacc
tgcggctgtgtgtgtgtggtggagaacctgcacacaggctctcagaggcactggctcgga
cacacggaggagatctccaccctcgccatctcccatgatgctcagttagtggcgtcagcg
tctgggagcggtgcctcatcgaagagcctcatctgcatatggaatgtcacagacggttcc
cggagaaccagcatgtcgttccataagggcgcagtgcagagtatggccttcgccagggat
gaccgctacttcctgtcagtgggtgacttcagtgagcaggaggtggcgctgtggagcggg
agctgcttcgagctgctgtgtcgcgtgacggcgccgtgggcgctacacgaggcccgcttc
agccccgccatcgacggcctgctcgcttgcgtcggagcttccggaactctcttctgcacc
atacacacacagggcatgcagacagaactccaggtgcagagtgtgtgtgtgcctgacgat
gtaggtgacgcggagctgacatctctgtgcttcaacgccaacgggctgctctttacgggc
accagtggagggcaggtgtgtgtgtgggactgcaacacacaccgctgcttcatgagctgg
gaggcagacgagggagagatcggggtgttgctgtgctgtggcaataggctggtgtgtggg
agcaacagcaggcgtttgaggctttggtcagtggctgctgctcaagcactaagagcccag
gatgcggagcgatctcaggacagccctgcggtgcttctggagcaagagatgcagcttgac
ggggccgtggtcagtgccacctttgatgacgtcatggatatgggcattgtgggcaccacg
acgggcaccctgtggtacatcaactggacagaaagcaccagcatacggctcatcaacgga
cacaagagcaaggtgaatggtgtattattcagtccggacgagagccgctttgctacctgc
ggacaggatggaagtttgagagtctggacgtcgcctagtaacgaactgttggtccagttc
caggtgctcaatcagagctgtgagtgtgtgtgctggaaccctgggagctcggtgactgcg
gtgtgtgtgtcggggggttacagcgacgggacggtgcgagtcttcaacctgaactcgtct
gagatggagctgaagctgcagccccatgccaccgcggtgtccgccctgcagtactcctgc
cacggtctggtgctgttgtcagcaggacgagacggtgtgattgctgtaatcagtccagtt
actggggccacactgcgcattattagtgatcacaaaggggctcccattaccgccatgcaa
agtgtcaaaaaacagtataaggagtttgggcttcagggcgatgagctgtggttggcagtc
agtgctgataggcgtgtcagtgtgtgggcagctgattggaagaaggacaaatgtgagcta
cttgattggctgagtttccccgccccagctgcccctgagtatggggaagtcttgccacca
agcctggctgccttcagtccttgtgagcgaggggtcctagtttacactggctatggagtg
acaaaagagctcaccttctactgcctgaacaaaaaacaggtcctgagaaccatttctttg
tcagattgggctctttccttaagtctctgctctaaggaacgactacttgctgtcggctca
aagcaccgtgtgatgaagttgcttcacagctcctcgggtcgttttcaggacttcacccct
catggcgactccgtccagctctgctgcttctccccttcaggaaaacagctgcttacctgt
gctcacaatgagatactcctctggagcactcatagcctttaa
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