Sardina pilchardus (sardine): 134070412
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Entry
134070412 CDS
T10667
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1-like isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
134070412
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
spil04040
]
134070412
Ion channels [BR:
spil04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
134070412
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Ortholog
Paralog
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
134070412
NCBI-ProteinID:
XP_062382741
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All DBs
Position
22:10326531..10450385
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AA seq
1246 aa
AA seq
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MLVLEDGNRSVGTGNSIMTNYKSGNFKPGTSSIHMSKMDVIIPYSADVPCDNGQRMWWAF
LASSMVTFFGGLFIILLWRTLKYLWTVCCHCNVKKKDVQRVSNPTVVVGADGVVKTSDDK
DAVVAASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDSSDEIESCQ
NFTQDLTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRS
WLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDP
WENFQNSQSLSYWECVYLLMVTMSTVGYGDVCAKTTLGRLFMVFFILGGLAMFASYVPEI
IELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNIS
PNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCPDPDAEDASNIM
RVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQSCLAQG
LSTMLANLFSMRSFIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGFSFPEVCELCYVKLK
LLLIAIEYKSDIRESSTLINPGNHVKMEEGTLGFFIASDAKEVKRALYYCKACHDDITDP
KRIKKCGCKRTKMSVYKRMKLACFDCGRSEHDCACMSGSVRSNMDSLRQGYALSPLSVND
CTATLRSSKSNYNGYIKSMDEEPQSALSPKKKQRNGGMRNSPNTSPKVIRHDPLLIPGHD
QMETMDVNVKKYDSTGMFHWCPSKDIEKVMLTRSEAAMTVLSGHVVVCIFGDVKSALVGL
RNLVMPLRASNFHYHELKPIVFVGSLEYLKREWETLHNFPKVSILPGTPLSRADLRAVNI
NLCDMCVILSANQNNIDDASLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRS
SPENSPVHGLVRQPSITTGANIPIITELAKPGKTLPLVSFSQDKSSGNNIPMITELVNDS
NVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGAT
PELEGLLAEENALRGGYSTPQTLANRDRCRVAQLALNDGPFAELGDGGCYGDLFCKALKT
YNMLCFGIYRLRDAHITSPTQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRSSL
SHSSHSSHTSSKKSSSVHSIPASARPPGRSKGRDPRDKQKKDMVYR
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgttagttcttgaggatggcaaccgttctgttggcactggcaatagtataatgactaat
tataaaagtggcaattttaagccggggacgtcctctatccatatgtccaagatggacgtg
atcatcccgtattcggccgacgtgccctgcgataatggtcagcgcatgtggtgggcattc
cttgcttcgtccatggtcactttctttggaggtttattcatcatacttttatggcgaact
ctgaaatacctgtggactgtgtgttgccactgtaacgtcaaaaagaaggatgttcagaga
gtcagcaaccccacagttgtcgtgggagcggacggcgtggtcaagaccagcgatgacaag
gacgccgtggtggctgccagcgaggtgggctggatgacctcggtcaaagactgggccggg
gtcatgatctcggcgcagacgctcaccggacgagtcctggtggtgctggtgtttgcgctc
agcattggggccctggtgatctacttcatcgactcctcagatgagatagagtcttgccag
aacttcacccaggacctcacgctacagatcgacatggcttttaacgtcttcttcctgttg
tacttcggcctgcggttcatcgcagccaatgacaagctgtggttctggctggaggtcaac
tccgtggtggacttcttcaccgtaccgccggtgttcgtctccgtgtacctcaacaggagc
tggctggggttaaggttcttaagagccttaaggttgatacagttctcagaaattttacag
tttttgaatattttaaaaactagcaattccataaaacttgtgaacttgtgctcaatcttc
ataagcacatggcttactgcagctggattcatccacttggtggaaaactcaggggaccct
tgggaaaacttccaaaattcccaatccctttcctactgggaatgtgtctacttactcatg
gtcaccatgtccacagtgggatatggagatgtttgtgcaaaaacaacccttgggcgcctt
ttcatggtcttcttcatcctcggtggattggccatgtttgccagctacgtccctgaaatc
atagagttaataggaaaccgcaagaaatatggtggttcctatagtgcggtaaatgggcga
aagcatattgtggtgtgtggtcatattacgctcgaaagtgtgtccaacttcctaaaagac
tttcttcacaaggacagggatgatgtcaatgtagaaattgtttttcttcataatatttcc
cctaatcttgagctggaagccttattcaaacgccatttcactcaggtggaattttaccaa
gggtctgtcctcaaccctcatgatcttgccagagtgaagattgagtcggctgatgcctgt
ttgatcttagctaacaaatactgcccagaccctgatgcagaggatgcctccaacataatg
agagtgatatccatcaagaattaccatccaaagatccgcatcataacacagatgttgcag
taccacaataaggcccatctcctgaacatcccgagctggaactggaaagagggcgacgac
gccatctgcctggccgagctgaaactcggcttcatcgcccagagctgcctggcacagggc
ctgtccaccatgctggccaacctcttctccatgaggtcgttcatcaagattgaagaggac
acgtggcagaagtactacttggagggggtggccaatgaaatgtacacagagtatctttct
agtgcctttgttgggttttccttccctgaggtttgtgagttgtgctatgtgaagctgaag
ctgttgctaatagccatagagtacaagtcagacatacgagaaagcagcacactcatcaac
cctgggaaccatgtgaagatggaggagggaacgttgggcttcttcatagccagcgatgct
aaagaagtgaagagggcgttgtactactgcaaagcttgccatgacgacatcacagatccg
aaacggatcaaaaagtgtgggtgcaaaagaaccaagatgtccgtctacaagagaatgaaa
ctggcatgttttgattgcggccgctcagagcatgactgcgcgtgcatgtcaggcagtgtg
cgtagtaacatggactctctccgacaaggctacgcgctctcccccctgtctgttaatgat
tgcacagccactttgcgctcctctaaaagtaactataatggatatatcaaatcaatggat
gaggagccacagtctgccctgtcacccaagaagaaacagcgcaatggcggcatgaggaac
tctcccaacacctcgcctaaagtgatcagacatgatccgctcctcatccccggccacgac
cagatggagaccatggacgtgaacgtgaagaaatacgactccacgggcatgtttcactgg
tgtccatctaaagacatcgagaaggtcatgctaacacggagcgaggcggccatgacagtc
ctcagtggtcacgtggtggtctgcatcttcggggacgtgaagtcagctctggtgggcctc
cggaacttggtgatgcccctgcgggccagcaacttccactaccacgaactcaagcccatc
gtgttcgtgggctctctggagtacctgaagagggagtgggagaccctccacaacttccct
aaagtctccatcttacctggcacacctttgagccgcgctgacctgagagctgtcaacatc
aacctgtgcgacatgtgcgtcatcctgtcggccaatcagaacaacatcgacgacgcttcg
ctgcaggacaaggagtgcatcctggcgtcgctcaacatcaagtccatgcagtttgacgac
agcatcggggtcttgcaggccaactcccaagggttcactccacctggcatggacaggtct
tctccagaaaacagcccagtccacgggctggtgaggcaaccgtccatcaccaccggagcc
aacatccccatcatcacagagctggctaagccaggcaaaacactgcccttggtctcattc
agtcaggataagagcagtgggaacaacatcccaatgattactgagctggtcaacgactcc
aacgttcagttcttggaccaagacgacgacgacgacccagacacggagctgtacctcacg
cagcccttcgcctgcgggacggcctttgccgtcagcgtgctggactccctcatgagcgcg
acgtacttcaacgacaacatcctgacgctgatccggacgctggtgaccggcggcgccacg
cccgagctggagggactcctggcggaggagaacgccctgcgcggcggctacagcacgccg
cagaccctcgccaaccgggaccggtgccgcgtggcacagctggcgctcaacgacgggccc
ttcgccgagctgggggatggaggttgctatggtgatttattctgtaaggcacttaaaaca
tacaacatgctatgttttgggatttaccgcctaagagatgcacatataacttcacccacc
cagtgtaccaagcggtatgtgatcaccaacccgccgtacgagttcgagctggtgcccacg
gacctgatcttctgcctgatgcagtttgaccacaacgcgggccagtcgcggagcagcctg
tcgcactcctcgcactcgtcccacacgtccagcaagaagagctcgtccgtgcactccatc
cccgcctccgcacgcccccccggccgcagcaaaggccgcgacccgcgggacaagcagaaa
aaagacatggtttacagatga
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