Sardina pilchardus (sardine): 134070846
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Entry
134070846 CDS
T10667
Symbol
zc3h13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spil03019
]
134070846 (zc3h13)
Messenger RNA biogenesis [BR:
spil03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
134070846 (zc3h13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
134070846
NCBI-ProteinID:
XP_062383298
LinkDB
All DBs
Position
23:complement(2706669..2726429)
Genome browser
AA seq
1908 aa
AA seq
DB search
MSKIRRKVTVENSKTISDSSASTTPSRRPSVFERLGPSTGGNAAETHCRNWLKTGNCSYG
NTCRYTHGTQPRGKGFSGTFSRSAERPTGDLRERMKNKRQDAEADAQKRDPEEPTSPATR
QKQRDSSRGRHREKEDIKITKERTPASEEEPAEWEGTREDSDNGDYDYELSLEMKRQKIQ
RELMKLEQENLDKREEITIKKEESTAKNRPGSMSKASPERGSSKGSPSSRKSSGSPKYKA
TGKSAGSGKKEKSSSSSVISSPVSDQTRAEESESRFSKGGHGKKKGPRTPSPPPPVPVEP
HVVGKKHKGKHKNKDKSEDRAKEGKERGRDAEKHKEKKDKRRDRSESSHKAKRSVTSDER
SGSVSSPSRDVSPPSRRKSSSPKGSSQKPPAAASPHRSRGSPVRQQHSPSPSVARHHSPS
SHSGSRSSPQRHTPSPTPARNRRNRSPPSPSYPRSEPGPPASSSPPPSSSSSALRRSRSP
LTPRGPSPPAQGQRRASPGRRHSQGRERGARAERDRSPPPQERRHERRDESRGRREKESG
RDERDYEPEQSSSRDNRDERESRDSRDRRDARDRRDTRDERPHRQDASKEARGDASRSDA
RSSREAPEHRERERERERERERERERGEAHRKDDAAPEDRGSYGKGHSREEARTETRSEA
RTDARTETRSDARAERGGRGRGRGAETTDKGSSRGSRASPGDRGHDNWESRSGVRERSAE
RGSERAADSKATERANERTTDRYGNERPRGEQARDSSYDRRSGHGDRERRDNRDREVRAP
SPGRHQSRGEEAEREERRDDRRTERGGDERRDERPRERERDREREREKEKEREKEREAER
ERERVRERDREREREREREREREREREEREREREREEREREREERERERERERKERERER
EQRERERQREWEEREKGREERRERRDDPRDDRPVRDSVEERKPSRKRHRGETTPSPRSSP
KRARDASPADSDGYNSSEEKGEKHRLLSQVVRPQDPPSRSPPPAPPRAPAEEKPSRWKED
ERRPDKKDVRGRTHEDGRGGGGGGSGADRRGDQEGVPAASDTRRGKEREASPPAATVPVA
TAEERETPAAAAHEEGKKKSKGQKKGLKKNRREEEQRATAGVTARDDRFPAEPAVTNPPP
PETPPPPLLSPRKPPKKKALDKKRKRSRGADSDASEDEPGAAAHHPVSKRRRGPRTPPPI
TKEDLLSQRVLAASQRSPLPLPLSDWSDEDVPDRGEPPPPPPPPPPPPPVQPLPEPRTLL
PVEALPSRRLRGRTDPPIAPLLPDPPMLLPTPPLQPLLPQHMLRKPLLPHAPGVPLEPHP
SVGRPGVLGNAPLGRPSRRLRSPSNETHRDENPQVPRARRGRQPPLGNVARERERERERE
RERERDRERERERERERERERERERERAAVGEPVGAERKSRIDQLRRGEPSRSTSSDRQD
SRSHSSRRSSPESERQARSRAGSYDSRERERDRDRDVFDRKDPRQPPGPPGLGLGLGLGL
GLGLGGLGLGPAGVPQQPREWEQEPQRDWGPRGPREPLLPHRGANREPIRERERDLREPR
ERERLLPEGLLSGAVHERLERERERERAEREREHRERERERERERERERERERGERERLL
PIDPMAHGEPKARGDARMERGDYEPLLPREAVAMDTDKPADSAHAPTEAAQEEKGDSLDE
DDVKGEDNQSMVSGGEEYEPISDDELDEILGDSSQKREDQQDDDRVPGPLDVIDVDWSSL
MPKQKQEPRAPGAALLRFTPGAVLLRAGVSRRLAGPQLLARVKEVCRSELDDPKDAERLF
EHDLGALNMAALNRRVERANLLRNLGSGCKALSARRDIAIRKQLLKNDKGTTKQMYSTPP
VGDSELLQLSVRLFKKALASSQTADLERAQTSAASAPTAAPSAEVCVS
NT seq
5727 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagatcaggcggaaggtaacagtggagaattcgaagaccatatctgacagcagt
gcgagcaccacaccctctcgaaggcccagtgtttttgagagactcggccccagcaccgga
gggaatgctgcggagacacactgtagaaattggttaaagactgggaactgcagttacggc
aatacttgtcgctatacacatggaactcagccaaggggcaaaggcttttctggaacgttt
agcaggtcagcagagaggcccactggggatctccgggagaggatgaagaataagagacag
gatgctgaagcagatgcccagaaaagagatccagaagagcctacatcacccgcaaccaga
cagaagcagcgcgactcctctcgtggccgtcaccgtgagaaagaggacataaagatcacc
aaggagagaactccagccagcgaggaagagccagccgagtgggagggcactcgagaagac
tctgataacggtgactacgactacgagttgtctttggagatgaagagacagaagattcag
cgcgagctgatgaagctcgagcaagagaacttggacaaaagggaggagatcaccatcaag
aaggaggaatccacagctaagaacaggcccggaagcatgtctaaggcttcccctgagcgc
gggagctccaaagggtccccctcgtcccgcaagtccagcggatcccccaagtacaaggcc
acagggaagagcgccggctctgggaagaaggagaagtcgtcctcctcctccgtcatctcg
tctccggtgtcggaccagacccgggccgaggagtcggagagtcggttctctaaggggggt
cacggtaagaagaagggcccgcgcacccccagcccccccccgccggtcccggtggagccg
cacgtggtggggaagaagcacaagggcaagcacaagaacaaggacaagtcagaggaccgc
gccaaggagggcaaggagcgcggccgcgacgccgagaagcacaaggagaagaaggacaag
cgcagggaccgctcagagagctcccacaaggccaagcggtcggtgacgtcagacgagcgc
tctggaagtgtgtcctcgccctcccgagacgtgtccccccccagcaggaggaagtcctcc
tcccccaaagggtcctcccagaagccccccgccgccgcatccccacaccggtcccgtggc
tccccggtgcgtcagcagcacagtccgtccccctcggtggcgcggcaccactccccgtcc
tcccactcgggctctcgctcgtcgccccagagacacaccccctcccccacgcccgctcgc
aaccgccgcaaccgcagccccccctccccttcgtacccccgcagcgagcccggccccccc
gcctcgtcgtcccccccaccctcctcttcctcctccgccctgcgccgctcgcgctccccc
ctgaccccccgtggcccctcccccccggcacagggccagcgccgggccagtcctggacga
cgccactcgcagggccgagagaggggagcgcgcgcagaacgagaccgcagcccgccgcca
caggagagacgccacgaacgcagagatgagtctcgcgggcggcgtgagaaggagagcggt
cgagacgagcgggactacgagccggagcagagcagctcgcgggacaaccgtgacgagcgc
gagtcccgggacagccgcgaccggcgagacgccagggaccggcgcgacacccgcgacgag
cggccgcaccgacaggacgcgtccaaggaggcccgcggggacgcgtccaggagcgacgcc
cgctcctcacgagaggcgccggagcaccgggagcgcgagagggagcgggagcgggagcgg
gagcgcgagagggagcgcggcgaggcccaccgcaaggacgacgccgccccagaggatcgt
gggagttacggcaagggccacagccgcgaggaggcgcggaccgaaacacggagcgaagcg
cggactgatgcgcggaccgagacccgatcggacgcccgcgccgagagagggggcagaggt
cgaggccgaggagccgagactaccgataaaggttcgtctcgaggctcgcgggcgtctcca
ggtgaccgtggccatgacaactgggagtccaggagcggagttcgcgagcgcagtgctgag
agaggctcggagcgcgcagccgacagcaaggccaccgagcgagcaaatgagcgcaccacc
gatcgctacggtaacgagcggcccaggggcgagcaggcccgagactcctcctacgaccgc
aggagtggccatggcgaccgcgaacgcagggacaaccgcgacagagaggtgagagcgccc
tctcctgggcgacaccagagccgcggcgaggaggctgaacgtgaggagcggcgggacgat
cggcggacggagaggggcggtgacgagagacgagacgagcgtccacgggagcgagagagg
gaccgcgagagggagagagagaaggagaaggagagagagaaggagcgggaggccgagcgc
gaacgagagagggtccgagagcgagaccgagagcgcgagagggagcgcgagagagaacgg
gagcgagagagagagcgcgaggagcgagagcgcgagagggagagagaggagcgcgagagg
gagagagaggagcgagagagggagagagagcgggagcggaaggagagagagcgtgagcgc
gagcagagagagagggagagacagagggagtgggaggagagagagaagggaagagaggag
cgcagagagaggagggatgaccccagagatgaccgccccgtccgagactctgtcgaggag
cgcaagcccagtcgtaagagacacagaggggagaccacacccagcccccgcagctctccc
aaacgcgcccgcgacgccagccctgccgacagcgacggctacaacagctccgaggagaaa
ggtgagaagcaccggctgttgagtcaggtggtgcgtccgcaggaccccccctcccgctcg
ccgccccctgcccccccacgcgcccccgccgaggagaagccgtcgcgctggaaggaggac
gagcggcgtccagacaagaaggacgtgcgtggacgcacccacgaggacggccgaggagga
ggaggaggaggaagtggcgctgaccggcgaggggatcaggagggcgttccggccgcgtcg
gacaccaggaggggcaaggagcgcgaggccagcccccccgccgccaccgtccccgtggcg
accgcggaggagcgcgagacgccggccgcggctgcccacgaggagggcaagaagaagagc
aaggggcagaagaagggcctcaagaagaaccggcgcgaggaggagcagcgggccacagca
ggagtgaccgcgcgtgacgaccgcttccccgcggagcccgcggtcactaacccgcctcct
ccggagactcctccccctcccctgctgtcgccgcggaaaccgcccaagaagaaggcgctg
gacaagaagcgcaagcgctcgcgcggcgccgactcggacgcgtccgaggacgaaccggga
gccgccgctcaccacccggtcagcaagcgccgccgcgggccccgcacccccccgcccatc
accaaggaggacctgctgtcccagagggtgctggcggccagccagaggtcaccgcttccc
ctgccgctcagcgactggtccgacgaggacgtccctgaccgcggcgagcctcctcccccc
ccaccacctccaccacccccccctccggtccagcccctgccggagcccaggacgctgctg
cccgtcgaggctctgcccagccgtcgtctacgtggacgcacggacccccccatcgcgccg
ctgctccccgacccccccatgctgctgcccacgccccccctgcagccgctactgccccag
cacatgctgcgcaagcccctcctgccccacgcgcccggcgtcccgttagagccgcacccc
tccgtgggccggcccggagtcctgggcaacgcgcccctgggtcgcccctcgcgccgcctg
cgatcgccctccaacgagacgcaccgcgacgagaacccgcaggtgccccgcgccaggaga
gggcgccagccgccactgggcaacgtggcacgggagcgcgagagggaacgcgagcgagag
cgcgagagggagagagaccgggaacgggagcgggagagggagcgggagagggagagggag
cgggagcgtgaacgggaaagagcggcggtcggagagccggtcggggccgagaggaagtcc
cgcatcgaccagctgaggagaggagagcccagccgcagcacctcttcagatcgccaggac
tcccggagtcacagttcccgacgcagctcccccgagtcggagcgtcaggcgcgttctcgt
gcgggctcctacgacagcagggaacgcgagcgggaccgagaccgcgacgtcttcgaccgc
aaggacccgaggcagccgccggggcccccaggactggggctgggtcttgggctggggctg
gggctcggactgggcggactgggcctcggtccggccggcgtcccccagcagcccagggaa
tgggagcaggagccgcagagggactggggcccccggggcccccgagagccactgctgccc
caccgcggcgccaaccgcgagcccatccgcgagcgagagcgcgacctgcgggagccccgt
gagcgcgagcgcctgctgcccgagggcctgctgtccggcgccgtccacgagcggctggag
cgcgagcgcgagcgggaacgggccgagcgcgagcgcgagcaccgggagagagagcgggag
cgcgagagggagagggagcgggagagggagcgggagcgcggggagagggagaggctgctc
cccatcgaccccatggcccacggagagcccaaggccagaggagacgcacgcatggagcgc
ggcgactacgagcccctgttgccgcgggaggctgttgccatggatactgacaagccggcc
gacagcgcgcatgctccgaccgaggcggctcaagaagagaagggggacagtcttgatgaa
gatgatgtgaaaggagaggacaaccagtcgatggtgtctggaggtgaagagtacgagccc
atcagcgatgatgaactggacgagattcttggagacagcagtcagaagcgagaggaccag
caggacgatgacagagtcccaggtccgctggacgtgattgacgtggactggtccagcctg
atgcccaagcagaagcaggagcctcgtgcccccggggcggcgctgctcaggttcaccccc
ggcgccgtgctgctccgcgcgggcgtctcgcgccgcctggccggaccgcagctcctcgcc
cgcgtcaaagaggtgtgccggagcgagctggacgacccgaaagacgctgagcggctgttt
gagcacgacctgggcgctctcaacatggcggcgctgaacaggcgcgtggagagggccaac
ctcctgcggaacctgggctcgggctgcaaggccctcagcgcacgcagagacatcgccatc
cgcaagcagctgctaaagaacgacaagggcaccaccaagcagatgtactccactcctcca
gtgggcgactctgagctgctgcagctcagcgtgcgtctctttaagaaggccctcgcgtcc
agccagacggccgacctggagcgcgctcagaccagcgcggctagcgccccaacggccgcc
ccctccgccgaggtgtgtgtgtcctaa
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