Sardina pilchardus (sardine): 134070860
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Entry
134070860 CDS
T10667
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04140
Autophagy - animal
spil04148
Efferocytosis
spil05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134070860 (vps16)
04148 Efferocytosis
134070860 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
134070860 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134070860 (vps16)
Membrane trafficking [BR:
spil04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
134070860 (vps16)
Hops complex
134070860 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
DUF740
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
134070860
NCBI-ProteinID:
XP_062383320
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Position
23:complement(28503297..28517122)
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AA seq
835 aa
AA seq
DB search
MAFVTANWNPLGEAFYRKIELYEMGWNLRDGLRDCLIAAAPYGGPIALLREPQRRSPSAR
PQLEIYSASGSSLASFAWKSGVVKHLGWTVCDDLLCIQEDGTVLIYDLFGSFKRHFSMGN
EVVQNQVLEAKVFHSPYGTGVAIITGAFGVTLATNIDDLKLRRLPGVPGLHEAPSCWAVL
TQDRQSKVLLAHGADLFILDNTACTAVTPPGLSPQATSIVSMAVSFSYKYLALFTDSGHV
WMGSSNLKDKLSEVETKVRTPPKQMVWCRRPKSEQPSVVIMWDRHLLVAGKCKETISYHL
DDDSVLVPELDGVRIISSTHHELLQEVPGACEEIFKIASMAPGALLLEAHKEYEKESQKA
DEYLREIKEQSLLGEAVRQCVEAAGHEHEPETQKTLLRAASFGKCFLSNFPPDQFVSMCR
DLRVLNAVRDYLVGIPLTHTQFRQMTLQVLIDRLVFRKLYPLAIEICRYLKIPEYQGVSR
VLKHWACCKVQQKEEADEVVARAVSIKLGEAAGISYSEIATKAYECGRTELAIKLLEFEP
RSGEQVPLLLKMKRSQLALSKAIESGDTDLVYTVVTYLKNEMNRGDFFMTLRNQPVALSL
YRQFCKHQEQNTLKDLFNQDDDHQELGNFYVKASYKEKRLEARLSLLQSAVDEYNKAKNE
FAAKATEEEMRLLRFQKRLEDEKGEQLMGLSLQNTLQALLTIGLHKQAEQLYKDFRVPDK
RYWWLKLTALADKEDWEELEKFAKSKKSPIGYLPFVEVCVKRHNKYEAKKYVSKVMPEQK
VKAHLAVGDLEGAADTAIERRNEGEISTVLSRCSATTDRAVMERLNRARSAGAKK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttgtgacagcgaactggaacccgcttggggaggcgttttacaggaagatcgag
ctgtatgagatgggatggaacctgagggatgggctgagagactgtctgattgctgctgca
ccctatggaggacccattgcccttctccgagagccccagagacgttctcctagtgcccgg
cctcagttggagatttattctgcatctgggagttccctggccagttttgcgtggaagagt
ggagtggtgaaacacctggggtggacggtgtgtgatgacctgttgtgcattcaagaggat
ggcactgtgctcatctatgatctctttggcagcttcaaaagacacttcagcatgggaaat
gaagtggttcagaatcaggtgctggaggctaaggtgttccattccccctatggaactgga
gttgccataatcactggagctttcggggtcaccttggcaacaaacattgatgacctgaag
ctgcggcggcttcccggagtcccaggcctgcatgaggcgccctcctgttgggctgtgttg
actcaggaccgccagagcaaagttctgcttgcacacggagcagacctattcatactggac
aacacagcctgcactgcagtgacacccccaggtttgtctccccaggccaccagtatagtg
agtatggccgtgtccttcagctataagtacctggctctcttcactgactctggccacgtg
tggatgggctcatccaacctcaaggacaaactcagtgaggtggagaccaaagtgagaacc
ccccctaagcaaatggtctggtgtcggagaccaaagagtgagcagccctcagtggtcatc
atgtgggaccggcacctcctagtggccggcaagtgtaaagagaccatctcgtatcacctg
gacgatgactctgtgctggtgccggagcttgatggggttcgcatcatcagtagcacacac
catgagctgctgcaggaggtgccaggtgcatgtgaggagatctttaagattgcctccatg
gccccgggggccctgctgctagaggcacacaaagagtatgagaaagagagccagaaggcg
gatgagtacctgcgtgagattaaggagcaaagccttctgggtgaagccgtgcggcagtgt
gtggaggcagcaggacacgagcatgaacccgagacccagaaaacactcctgagggctgcc
tcctttgggaagtgtttcctcagtaatttccctccagatcagtttgtgagcatgtgcaga
gacctgcgtgtcctcaacgctgtgcgagactaccttgtgggaatccccctcacacacaca
caattcagacagatgaccttgcaagttcttattgaccggctggtgttccgtaagctgtat
ccactggccattgagatctgccgctatctcaagatccctgaataccagggagtgagcaga
gtactgaaacactgggcctgctgcaaggtgcagcagaaggaggaggcggatgaggtggtg
gcgcgggcggtgagcatcaagctgggcgaggctgcagggatctcctactctgagatcgcc
accaaagcctacgagtgtggacgcaccgaactggccatcaagttgttggagtttgagcct
cgctctggagagcaggtccccctgttactgaagatgaagcgcagccagctggccctgagc
aaagccattgagagtggagacactgacctggtgtacacggtggtgacatacttgaagaac
gagatgaaccgaggtgacttcttcatgactctgagaaaccagccagtcgcccttagtctc
tacagacagttctgtaaacatcaagaacagaacaccctgaaagacctctttaaccaagat
gatgatcatcaggaattagggaacttctatgtgaaggccagctacaaagagaagaggttg
gaagcccgtttgtctctactacagagtgctgttgacgaatacaataaagcaaagaacgag
tttgctgccaaggcgacggaggaggagatgcgtctgctgcggttccagaagcgcctggag
gatgagaagggggagcagctgatgggcctgagcctgcagaacacgctgcaggcgctgctc
accatcggcctccacaagcaggccgagcagctctacaaggacttcagggtccccgacaag
aggtactggtggctgaagctgactgcccttgctgacaaggaggattgggaggaattggag
aaatttgcaaagagcaagaagtcgcccatcggatatctgccttttgtagaggtgtgtgtc
aagaggcacaataaatacgaggccaagaaatacgtgtcaaaggtgatgccagagcagaag
gtgaaagctcacctggcagttggtgatctggagggggctgcagacacagccatcgagcgg
cgcaacgagggcgagatcagcaccgtgctctcccgctgctcggccacgaccgaccgcgca
gtgatggagcgcctcaaccgagcccgctcggccggcgccaaaaagtga
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