Sardina pilchardus (sardine): 134070870
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Entry
134070870 CDS
T10667
Symbol
vldlr
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134070870 (vldlr)
Membrane trafficking [BR:
spil04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
134070870 (vldlr)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
134070870
NCBI-ProteinID:
XP_062383335
LinkDB
All DBs
Position
23:complement(16945529..16966155)
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AA seq
891 aa
AA seq
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MVTSILGFLILPICLCGYVRGMQTQTHCEPSQFQCGNGRCIPSVWKCDGDEDCTDGSDES
TCVRKTCEQLDFVCRNGQCIPKRWHCDGEPDCEDGSDESIEVCHTRTCRVNEFSCGAGST
QCIPVSWKCDGEKDCDNGEDELLCGNITCAPLEFTCASGRCISANFVCNGEDDCGDGSDE
QDCPPSSCGPTEFQCTNASCIPGNWVCDDDVDCPDQSDESPQRCGRPTPPAKCSSSEVQC
SSGECIHRKWRCDGDPDCKDGSDEKNCPVRTCRPDQFKCEDGICIHGSRQCNGARDCADG
SDEVNCKNLTQCHGPDKFKCRSGECIEMNKVCNKARDCPDWSDEPIKECNLNECLLNNGG
CSHICRDMVIGYECDCTPGLQLIDRKTCGDINECQNPGICSQICINLKGGYKCECHSGYQ
MDPTTGVCKAVGKEPCLIFTNRRDIRKLGLERREYTQIVEQLRNTVALDADFTQQRIFWA
DLGQKAIFSTRLDKREETSSHIKVIEDVQMPVGIAVDWIYKNIYWSDLSSKSIAVANFNG
TKRRVLFDNGLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGVDRQVLVETDIQWPNG
ITLDLIKSRLYWVDSKLHMLCSVDFNGDNRRKVLQSSNFLAHPFALTVFEDRVFWTDGEN
EAIYGANKFTGSDVTILANNLNEPQDIIVYHELIQLSGTNWCNEKQENGGCSYMCLPAPQ
INKHSPKYTCACPDGWKLGADGRTCKPVNVPAAPKDSGKVQSSSAPPQDRLLHSPNKLNG
SCKYGECGNHLFPTMQEGNVSASMHEVSSSAKGSAAAWAILPVLLLAMAVAGGYLMWRNW
QTKNKKSMNFDNPVYLKTTEEDLNIDISRHSASVGHTYPAISVVSTDDDLS
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgtctattctgggatttcttattctgccaatatgtctgtgtggatatgttcga
ggcatgcagacgcagacgcactgcgagccctcgcagttccagtgtgggaacggccgctgc
atcccctctgtgtggaaatgcgatggagacgaggactgcaccgatggcagcgacgagagc
acctgtgtgaggaaaacgtgtgagcagttggactttgtctgtcggaatggccagtgcatc
cccaagcggtggcactgtgacggcgagcctgactgtgaagacggctccgacgagagcatc
gaagtgtgccacacccggacgtgtcgtgtgaacgagttcagctgcggggccggctctacg
cagtgcatccccgtctcctggaagtgcgacggagagaaggactgcgacaacggagaggac
gagctgctctgtggtaacattacctgtgctcctctggagttcacctgtgccagtggccgc
tgcatctcggccaacttcgtgtgcaacggcgaggacgactgcggcgacggcagcgacgag
caggactgtccgccgtcctcgtgcggccccaccgagttccagtgcaccaacgcctcctgc
atcccgggcaactgggtgtgcgacgacgacgtggactgtccggaccagtcggacgagtcg
ccgcagcgctgcggacggccgacgccgccggccaagtgctcgtccagcgaggtccagtgc
agctcgggcgagtgcatccacaggaagtggcgctgcgacggcgacccagactgcaaggac
ggcagcgacgagaagaactgccctgtccgcacctgcaggccagaccaattcaagtgtgag
gacggcatctgcatccacggcagcaggcagtgcaatggcgcccgcgactgcgccgacggc
agtgacgaagtaaactgtaaaaacctgacccagtgccacggcccagacaagttcaagtgt
cggagtggggagtgcatcgagatgaataaagtgtgcaacaaggcgcgagactgtcccgac
tggagcgacgagcccatcaaggagtgcaatctcaacgaatgtctgctcaacaatggcggc
tgctcccatatctgccgggacatggtgattggttacgagtgtgactgtactccaggcctt
cagctcattgatcgcaagacctgtggagatatcaacgaatgtcagaacccagggatctgt
agccagatctgcattaacctgaaaggagggtacaagtgcgagtgccacagtggctaccag
atggaccccaccacaggggtctgcaaggctgtcggcaaggagccctgtctgatcttcacc
aatcggagggacatccggaagctgggcctggagaggcgggaatacacccagatcgtagag
cagctgaggaacactgtggccttagacgctgatttcacccaacagaggatcttctgggca
gaccttgggcagaaagccatcttcagcacacgactagacaagcgagaggagacctcaagc
cacatcaaggtcattgaggatgttcagatgccggtaggaattgctgtggactggatttat
aagaacatctactggtccgacctgagcagcaagagcattgcggtggcaaacttcaatggc
actaagaggagagttctgtttgacaacggactgaaggagccggcctccattgctgttgat
cccctctcagggtttctgtactggtcagactggggtgagccagcgaagattgagaagtct
ggcatgaatggagttgaccggcaggtccttgtcgagacggacattcagtggcccaatggg
atcactttggatctgataaagagccgcctctactgggtggattccaagctgcacatgctg
tgcagtgtcgacttcaatggagacaaccgccgaaaagtacttcagtcctccaacttcctg
gctcacccgtttgccctcaccgtctttgaggatcgggtgttctggacagatggggagaat
gaggctatttatggtgcaaacaagtttacaggatctgatgtcaccattttggccaacaat
ttaaacgaacctcaggacattatagtttatcatgagctaattcaactctcaggaaccaac
tggtgcaacgagaagcaagagaacggcggctgctcttacatgtgcctgccagcgccgcag
attaacaagcactccccaaagtacacgtgcgcctgccccgatggctggaagctgggggcc
gacggccggacgtgtaagccagtcaatgtcccagctgccccaaaggattctgggaaggta
cagtcatcctcggctccccctcaagaccggctcttgcattctccaaacaaactgaatggc
agttgtaaatatggtgaatgtggtaatcatttgtttcccacaatgcaagaagggaatgtc
agtgcatcgatgcacgaggtcagctcttcagctaagggatctgcagctgcctgggccatt
ttgccagtgttgcttcttgccatggctgttgctggtggctatcttatgtggagaaattgg
cagacgaagaataagaaaagcatgaactttgacaatccagtttacctgaagaccacagag
gaggacctcaacatcgacatcagcagacactccgcttccgtcggacacacgtacccagca
atatcggtggtgagcacagacgacgacctctcctaa
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