Sardina pilchardus (sardine): 134070990
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Entry
134070990 CDS
T10667
Symbol
sox1b
Name
(RefSeq) transcription factor Sox-1b
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spil03000
]
134070990 (sox1b)
Transcription factors [BR:
spil03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
134070990 (sox1b)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
134070990
NCBI-ProteinID:
XP_062383533
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Position
23:complement(3066252..3068039)
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AA seq
340 aa
AA seq
DB search
MYSMMMETDLHSPGAQSNTNSGHTGPNNGNKVNQDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKLMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLASGLLAGSGAGAGVGLGVGMSPGGVGQRLDSPGGHGGSAASYAHMNGWANGAYSGQV
AAAAAAAAMMQEAQLAYSQHPGNGTHHHHGHHHHPHNPQPMHRYDMTALQYSPLSNSPSY
MSASPSGYGGITYTQHQNSSVASTGAIGTLGSLVKSEPSVSPPVTTHTRGPCPGDLREMI
SMYLPTGETGDPAVQSRLHALPQHYQSSTGVNGTVPLTHI
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggaaacggacttacactcgccgggagcccaatcgaatacaaat
tcggggcacacggggccaaacaatgggaacaaagtgaaccaagaccgcgtcaagagaccg
atgaacgcgttcatggtttggtcccggggccagcgacggaagatggcacaagagaatccc
aaaatgcacaactctgaaatcagcaaaagacttggcgccgagtggaaactcatgtccgag
gcggaaaagagaccttttattgacgaggcaaagcgattacgggcaatgcacatgaaggag
catccggattacaagtacagaccccggaggaagaccaagacgctgctgaaaaaagataaa
tattccttagcgagcgggcttctggccggatctggagctggcgctggtgtgggtctcggt
gttgggatgagcccaggtggggtcggacagaggttagacagtcctggcggtcacgggggc
tccgccgccagctatgcacatatgaacggctgggcgaacggagcctactcgggccaggtg
gcggcagcggcggcggccgcggcgatgatgcaggaggctcagctcgcatacagccagcac
ccgggcaacgggacgcaccaccaccacggacaccaccaccacccgcacaacccccagccc
atgcaccgctacgacatgactgctctccagtacagccccctttccaactcccccagctac
atgagcgcgtcgccgtcagggtacggggggatcacctacacacagcatcagaactccagc
gtggcttccacaggtgcaatcggcactctgggatctctggtgaaatcggagccaagtgta
agccctcccgttactactcacacccgtggtccttgtcccggagacttgcgagaaatgata
agcatgtatctaccgacgggagagacaggtgacccggcagttcaaagtagacttcacgct
ttgccacagcactatcaaagttccacgggggtcaatggcacagtcccactgacgcacatt
taa
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