KEGG   Sardina pilchardus (sardine): 134071468
Entry
134071468         CDS       T10667                                 
Name
(RefSeq) probable ribonuclease ZC3H12C
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
spil  Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:spil00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spil03019]
    134071468
Messenger RNA biogenesis [BR:spil03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     134071468
SSDB
Motif
Pfam: RNase_Zc3h12a Regnase_1_C UBA_6 UBA_N4BP1_C zf-CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 134071468
NCBI-ProteinID: XP_062384179
LinkDB
Position
23:27714392..27733119
AA seq 943 aa
MGLKDHLDDGTGHILDLGIDLDYLQVKATARDRPPSEADAHTKMEPGPSEEAEGRLPAGT
SLGSSSGIGSTPADSEESTDSEAEQINLPPRSAHPQLCRSPCLDLESASPPGTSVSEDAD
SVGSLRAYQNKMEFALKLGYQEDLIRLVLSKLGPEALINDILGELVKLGSKPESEQGGGS
AASQSRSSSMAPSSSSCSSSGSTTSSSGCGFSDSTESRQSDSPSQMDSLDDKDNLRPIVV
DGSNVAMSHGNKEVFSCQGIQLAVDWFLERGHRDITVFVPAWRKEQSRPDALITDQEFLR
RLEKDKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLANEKPEWKKFI
DERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPIIPEHKKQPCPYGKKCTYGHKCKF
YHPERGTQPQRSVADELRASAKSCSAKVPVESGLVKSHSMPGSQRPAEAKRAQAKRQSDP
SVRTLSYSDVEERLTSRSPKLDPSHGKGSATMLPAPGGPPMGHGHGHGHGQDPTREYPHP
SGKPHSGGMLASQYPMCESPDLSYCSLVRAYSGLRIAVPPRSPERRMLPDALLSDCSSEG
SASCGSSSTDSYGGVLGPAGERSCMSSPDLLSDDAAAPLRCPHHHLGQQQQQQQPPPHHH
HHHHHHRGSAQYPPPLPPPQTPPQHHLHQGHVLAPVPVPGYHHHHHHHHQQQQQQVPAPQ
SLTPRGYSFSLDEPPDSPLFTKHSRPYLSPQLQHQTVAARSSCPGDCPPLSGGSHPQSSP
LGRGLASTRADSVSDSRLYESSPLLPRKALYMGQERLGGWDPYYLQPPPPQAPPQPCYEP
FTFQGLQESREQAWRAPWGRGPSQPPPPHPSHSPQPQPMGSLNPPEPPPISRHQEVRQKV
FKNLCNIFPTELVRMVMGRYPHVTDAQQLAAAILAEKSQPGAY
NT seq 2832 nt   +upstreamnt  +downstreamnt
atgggcctgaaggaccatctagatgatggaacaggccacatccttgacctcgggatcgat
ctggactacctgcaggtgaaggctactgccagagaccggccaccctccgaagcggatgcc
cataccaaaatggagcctggcccgtcggaagaggccgagggcaggctaccagccggaacg
agcctgggcagcagtagcggcattggatccacacccgccgactccgaggagagcaccgac
agcgaggcagagcagatcaacctcccgccccgctctgcccatccccaactctgccgctca
ccgtgtctggacctggagtctgcctcacctccgggcacttccgtctctgaagacgccgac
tccgtgggaagcctgcgcgcctaccagaacaagatggaatttgcattgaagctcggctac
caggaggacctcattcggctggtgctcagcaaattagggcctgaggctctgattaacgac
attctcggtgagctcgtaaagctggggagcaagccagaaagcgagcagggcggtggatcg
gcagcgtctcagtccaggtcttcatcgatggcaccctcatcctcctcctgctcgtcctca
ggatccaccacctcttcatcaggctgtgggttctccgactccactgagtcccgtcagtcg
gattctccctcacagatggactctctggatgacaaggacaacctgaggcccattgtggtt
gacggcagcaatgttgccatgagccatggcaacaaggaggtcttctcatgccaaggcatc
cagcttgcagttgactggttcctggagcgaggacaccgtgacatcactgtgtttgtccca
gcttggaggaaggagcagtcgcggcctgatgctctcatcacagaccaagagtttctccgc
cggctggagaaggacaagatccttgtgttcacgccctcacgacgggtgcaaggtcgtagg
gtggtctgctacgatgaccgcttcattgtcaagctagcctacgagtccgacggcatcata
gtctccaacgacaactaccgggacttagccaatgagaagccagagtggaagaagttcatc
gatgagcggctgctaatgtattcattcgtcaatgacaaattcatgcctcctgatgaccct
ttgggtcgacatggcccaagtttggagaactttctgcgaaagcgaccaatcattccagaa
cacaagaagcagccctgcccttacgggaagaagtgcacgtacgggcacaagtgtaagttt
tatcacccagagcgtggcacccagccccagcgctcggtggcagacgagctccgcgccagc
gccaagagctgctcggccaaggtgcccgtggagtcaggcctggtgaagagccacagcatg
ccgggcagccagcggcccgccgaggccaagcgagcgcaggccaagcgccagtccgacccc
agcgtccgcacgctgtcctacagcgacgtggaggagaggctgaccagccgctcgccgaaa
ctcgacccgtcccacggcaaagggagcgccaccatgctgcccgctcccggcgggccaccc
atgggccacgggcacgggcacggacacgggcaggacccgacccgggagtacccccacccg
tcggggaagcctcactcgggcggcatgctggcgtcccagtaccctatgtgcgagtccccg
gacctgagctactgctcgctggtgcgcgcctactcgggcctgaggatcgccgtgcccccg
cgcagccccgagcgccgcatgctgcccgacgcgctcctgtcggactgcagcagcgagggc
agcgccagctgcggcagcagcagcacggactcgtacggcggcgtgctgggccccgcgggc
gagcgctcgtgcatgagctcgcctgacctgctgtcggacgacgccgccgcccccctgcgc
tgcccacaccaccacctcggccagcagcagcagcagcagcagccaccaccgcaccaccac
caccaccaccaccaccaccggggcagtgcccagtacccgccccctctgccgccgcctcag
acgccccctcagcaccacctgcatcagggccacgtgctcgcgcccgtcccggtgccaggc
taccaccaccaccaccaccaccatcaccagcagcagcagcagcaggtgcccgcgccacag
agcctgacgccacgcgggtacagcttcagcctggacgagcctcccgactcgcccctcttc
accaagcactcgcgaccctacctgtcgccgcagctccagcaccaaaccgtggccgcccgc
tccagctgccctggggactgtccgcccctgtcgggcggctcgcacccccagagctcgccc
ctgggccggggactggcctccacgcgggccgacagcgtttcggactcccgcctgtacgag
agctcacccctgctgccccgcaaggccctctacatgggccaggagcgtctgggcgggtgg
gacccctactacctgcagccgcccccgcctcaggcccctcctcagccctgctacgagccc
ttcaccttccagggcctccaggagagccgcgagcaggcctggagggcaccgtgggggcga
ggccccagccagcctcctcctcctcaccccagccactccccccagcctcagcctatgggc
tccctcaaccctcccgagcctccccccatcagtcggcaccaggaagtgcggcagaaggtg
ttcaagaacctgtgcaacatcttccccacggagctggtgcgcatggtgatggggcgctac
cctcatgtcacagacgcccagcagctggcagcggccattttggcagagaagagccagcct
ggagcgtactga

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