Sardina pilchardus (sardine): 134071470
Help
Entry
134071470 CDS
T10667
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like
KO
K23619
collagen type XXVIII alpha
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spil01002
]
134071470
Peptidases and inhibitors [BR:
spil01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
134071470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
DUF1194
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
134071470
NCBI-ProteinID:
XP_062384181
LinkDB
All DBs
Position
23:22197011..22236255
Genome browser
AA seq
1243 aa
AA seq
DB search
MHWSLLPLLLLCGLHCLEAQRQDDYDEDYEEEVDIRPRKRTNGKTLTTNLIPKNGQNPLA
EDCSLELAFVVDSSESAKDNHAQEKQFVIDVVERLQGVRLQTGQSLRSRTAVLQYSSRSF
TEQTFGQWQGVANFRARVQELRYIGQGTYATYAITNLTHLYMHESGLGAVKVAVFLTDGE
FHPRNPDIFSAMADAKNQGVRFFMVGITPAANAPGNVQQLRLMASPPASRFLYNMQDREI
LEKIVKEITALVDEGCPVSSPCVCDKGERGPPGPAGKKGRSGDDGIPGPKGIKGESGNTG
LAGREGAEGKPGYKGERGERGECGTPGIKGDRGPEGPVGIRGSRGPEGVAGPHGDIGPEG
PPGKKGERGLSGPPGIQGLPGVGLPGPKGDMGFQGRLGPPGPQGLGEPGPPGPQGPQGTQ
GERGQQGEGFPGAKGERGPEGSRGPRGGPGISIKGDKGDFGPPGPAGIIGQPGPGIQGEK
GVEGPRGPPGSRGPQGEGFPGSKGDQGLPGEVGSPGERGAGEPGSKGEPGSPGFGGVPGL
PGEDGAPGQKGEPGAVGLRGLEGAQGVGIQGEKGDQGQRGVRGLSGSAGPPGPSGPKGEP
GVPGRLGFPGLPGRALIGPKGDLGPPGPSGPIGETGYGLPGPKGDRGDHGPAGPFGPKGD
GYPGPMGPPGLTGLPGEPGPEGLGFPGPKGDVGFRGQPGLPGPPGEGKQGPPGIQGRSGP
PGPAGPQGIGIQGPKGDQGSPGGTGPRGPAGEGFAGAKGDRGSPGERGLKGIKGDLGDAG
VPGESGRPGVKGEAGLTREDVIRLIKEICGCGIKCKEVPMELVFVIDSSESVGPDNYNIV
KEFVTTLVDRVTIGRNATRVGLVLYSHEAKIQFNLTRYNAKQDVKQAIRNMPYMGEGTLT
GTAIRMATQAFNSARQGVRKVAVVITDGQTDTRDPVKLDIAVREAHAANVEMYALGIVNA
SDPTQAEFLRELDLIASDPDSEHMYLIDDFNTLPALESKMVNQFCEDENGALVLNRVNGY
LNGFNGYTNGNGNNNGYNGYNGHRNRINDANGQGSNNRKTLNGRHPLKPTNTHITTHRET
HGGTHTNTHSGTHTGTHTGTHSGTHTGTHTGTHTGTHSGRDHSHTVSSGGETTEHGGVAT
GGTQSHSRTHSHDNKTSVNRTSTPTVYVPVPREPFPEEIVPLDPRCELLLEPGPCREYII
RWYYDRQANACAQFWYGGCEGNRNRFDTEAECKKTCVARRAGG
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgcactggtcactgctccccctgctcctgctctgtggactccactgcctggaggctcag
cggcaggacgactacgatgaggactacgaggaagaagtggacatcaggccgagaaagagg
accaacggcaagacattgacgaccaacctcatccccaaaaatggtcaaaacccgctggca
gaggactgtagtctggagttggcgtttgtggtggacagctcggagagcgccaaggacaac
cacgctcaggagaagcagtttgtcatcgacgtggtggagcgcctgcagggcgtgcgcctc
cagacgggtcagagcctccgctcgcgcacggccgtcctgcagtacagcagccgctccttc
accgagcagaccttcgggcagtggcagggcgtggccaacttcagggcgcgcgtccaggag
ctgcgctacatcggccaggggacgtacgccacctacgccatcaccaacctcacccacctg
tacatgcacgagtccggcctgggggcggtcaaggtggccgtgttcctgaccgacggcgag
ttccacccgcgcaacccggacatcttctcggccatggccgacgccaagaaccagggcgtg
cgcttcttcatggtgggcatcacgccggccgccaacgcgccgggcaacgtccagcagctg
cgcctgatggccagcccgcccgcctcacgcttcctgtacaacatgcaggacagggagatc
ttggagaagattgtcaaggagattacggcgctggtagatgaagggtgtcctgtttcttcg
ccgtgtgtgtgtgataagggggagaggggacctccaggaccagctgggaaaaaggggcgc
tcaggtgatgatggcatcccagggcctaaagggattaagggggaatctggcaacactgga
cttgcgggtcgtgagggggccgagggtaagccaggctacaaaggagagaggggcgagagg
ggagagtgtgggacaccaggaataaaaggagacagaggtccagagggtccagttggtatt
cgtggaagtagaggcccagagggtgtggctggcccccatggggacatcggccctgaaggc
cccccagggaaaaaaggagagaggggactttccggcccacctggaattcagggtcttccg
ggagtaggtctgccaggcccaaagggtgacatgggcttccaaggacgactcggccctccc
ggtccacaaggccttggagaaccaggaccaccagggcctcaagggccacagggcacccag
ggagagaggggccaacagggtgaaggcttcccaggtgctaagggagaaagaggtccagag
gggtctaggggtcctagaggaggccccggaatcagcatcaaaggagataagggtgatttt
gggcctcctgggcctgctggtattatcggccaaccaggtcctggtatccaaggagagaag
ggtgtagaagggccgagggggcctccaggatcgcgtggaccacagggggaggggtttcca
ggatcaaagggagatcagggcttgcctggggaggttggatcgcctggggagagaggggca
ggagagccggggtcaaagggtgaaccagggtctcctgggtttggtggggtacctggtctt
ccaggagaggatggagcccctgggcagaagggagaaccaggggcagtgggtttaagggga
cttgaaggggcacaaggagttggcattcaaggagagaagggtgaccaaggccagcggggg
gtgaggggtttatctgggtcagctggcccacctggaccctcagggccaaagggtgagcca
ggtgtacctggacgactcggatttcctggtctgccaggacgtgcactaattgggccaaag
ggtgatctcggtccacctggtccttctggcccgattggagagactggctatggacttcct
ggtccaaaaggtgaccgaggagaccatggtccagcaggtccatttggacccaaaggggat
ggctacccaggccctatgggcccccctggtcttactggcctgccgggtgaacctggtcca
gaagggctgggcttccctggaccaaagggtgatgtgggcttcagagggcagcctggcttg
ccaggaccaccaggagagggcaaacaaggaccaccaggaatccaaggaaggtctgggcct
ccagggcctgcaggtcctcagggaattggtatccagggaccaaagggagaccaaggatct
ccgggggggacaggaccgaggggtcccgcaggagagggcttcgcgggggcaaagggcgat
cgcggttctcccggggagagaggccttaagggcattaaaggagacttgggagacgctggt
gttcctggcgaatcaggaagacctggtgtaaaaggagaagcaggcctcacgagggaagac
gtcatcaggcttattaaggagatttgtggctgcggcatcaagtgcaaggaggtgcccatg
gagctggtgtttgtgattgacagctcggagagcgtgggccccgacaactacaacatcgtg
aaggagtttgtcacgacgctggtggaccgcgtgaccatcggccgtaacgccacgcgtgtg
ggcttggtcctctacagtcacgaggccaaaattcagttcaacctgacacgctacaacgcc
aagcaggacgtcaagcaggccatccgcaacatgccgtacatgggcgagggcactctgacg
ggcactgccatacgcatggccacgcaggccttcaacagcgcccgccaaggcgtgcgcaag
gtggccgtggtcatcaccgacgggcagacggacacgcgcgaccccgtcaaactggacatc
gccgtccgggaagcccacgcggccaacgtggagatgtacgcgctgggcatcgtcaacgcc
agtgaccccacgcaggccgagttcctccgcgagctcgacctcatcgcctccgacccagac
agcgagcacatgtacctcatcgatgacttcaacacgctgccagctctggaatctaaaatg
gtcaatcagttctgtgaggatgaaaacggcgctttggtcctcaaccgtgtcaatggctac
cttaacggattcaacggctacaccaacggcaatggcaacaacaacggctacaacggctac
aacggccaccgtaaccggatcaatgatgccaacggccagggaagcaacaacagaaagaca
ctgaatgggagacaccctctcaagcctactaacacacacattactacgcatagagaaaca
cacggaggcacacacacaaatacccattccggaacacatactggcacacacacaggtacc
cattccggaacacatacgggcacacacacaggtacacacactggaacgcattctggccga
gatcactcacacactgtcagcagtggaggagaaaccaccgagcatggtggtgttgccact
ggtggcacacaatcacactccaggacccacagccatgacaacaagacatctgtcaacagg
acgtctacacctacagtctatgtcccggtaccaagagaacctttccctgaagagatcgtc
cccctggacccgcgctgtgagctgctgctggagccggggccctgccgagagtacatcatc
cgctggtactacgaccggcaggccaacgcctgcgcccagttctggtacggaggctgcgag
ggcaaccggaaccgctttgacaccgaggccgagtgcaaaaagacctgcgtggccaggaga
gcaggtggctaa
DBGET
integrated database retrieval system
