Sardina pilchardus (sardine): 134071683
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Entry
134071683 CDS
T10667
Name
(RefSeq) CLIP-associating protein 1-B-like
KO
K16578
CLIP-associating protein 1/2
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spil03036
]
134071683
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
spil04812
]
134071683
Chromosome and associated proteins [BR:
spil03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
134071683
Cytoskeleton proteins [BR:
spil04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
134071683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
Cnd1
TOR1L1_N
Sec7-like_HUS
HEAT_DAAF5
RTP1_C1
MMS19_C
ParcG
MMS19_N
TAN
Motif
Other DBs
NCBI-GeneID:
134071683
NCBI-ProteinID:
XP_062384483
LinkDB
All DBs
Position
23:24102647..24184662
Genome browser
AA seq
1537 aa
AA seq
DB search
MENMEQCVSQVMQKDLGRRLQVGQDIIDYILDRQRSHDLEQDQTLLDRMADNIASSWVNS
SNFKVALLGMDLLSALVTRLQDRFRSQIGTVLPSLIDRLGDAKDQVRDQDQTLLLKIMEQ
AATPQYVWDRMLGGFKHKNNRTREGVCLCLISTLNLYGAQGLTLSKIVPHICNLLGDPTS
QVRDGAMNCLVEIYRHVGERVRMDLGKKGLPQSRLNVIFSKFDEVQRSGNMILSSDKNID
DDDSVDGGRSSSSKGASSVRRAGNTGSMRRPSSASSSKSTGKEGGSAGAVDEEDFIRAFD
DVPTVQIYSGRELEDSMNKIREVLSDERQDWEQRVTALKKVRSLLLAGALEYDGLPQHLR
QMEPAFKLSAKDLRSQVVREACITLGHLSVLLGNRFDHGAESIMPTLLNLVPNSAKIIAT
SGVAVVRIILRHTHYPRLIPIITSSCISKSVAIRRRCFEFLDLILQEWPTNALERHVAVL
SETVKKGVHDADSEARSVARKCYWGFHGHFSREAEQLFQALELSYQKALQSHLKGSDSVM
SLPQSDRSSSSSQESLNRPLSKSSFGAGRTPKAVPSRATPGSSSLQRSRSDIDVNAAASA
KSRMPSVPSAAPFSSANALPPGSYASLDGGTPGKVEGRVRTRRPSAGSTAGSVTPATDSR
GRSRAKVVSQSQPGSRSSSPGKLLGHTYGRIPRPTGAATPADGRRSRIPRSQGCSRETSP
TRSGSARVSRIPRPSASQGCSRDTSRESSRDTSPARGFTPLVSRRHSRSTSALTTADPLG
YSDRFGLAHQARISASVNAMRILNTGTDVEAAVADALLLGDSRNKRRPMRRRYESPGIYS
DDDANSDASSACSERSYGSRNGGMPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLL
KSQRILSRVELKRLCEIFTRMFADPHSKVFSMFLETLVDFIMVHREDLQDWLFVLLTQLL
KKMGADLLGSVQAKVQKALDVTRDSFPYDQQFNILMRFIVDQTQTPNLKVKVAILKYIDL
LARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQMVLISLFELNTPEFTMLLGA
LPKTFQDGATKLLHNHLKNSSNAAAVGSPSNTVGRTPAPRHPSSRTSPLTSPTNCSHGGL
SPSMMEYDTENMNSDEIYSSLRGVTEAIQNFSFRSQEDVMEPVRRDGKRDDPAGGMASSG
AEQRVDVVDGGSGGGRTALDNKTSLLNTPSPRSFSGPRGRDYNPYNYTDTISGYDRSALK
EAVFDDDAEHFRDGRRQQEGGENKIMHPKAFPTGAGQQLELVGDLLKELSSSMGDRVEER
RTALLELLKVTREDCLAVWDEHFKTMLLLLLETLGDKDHTIRALALRVLREVLRNQPARF
KNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIVQTADYPINLA
AIKMQTKVIERIAKDSLITLLPDIIPGLLQSYDNTESSVRKASVFCLVAIYSVIGEDLKP
HLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSSHS
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
atggagaatatggagcaatgtgtttcccaggtgatgcagaaggacctaggccggcgatta
caggtcggtcaggatattatagactacatcttggacaggcagagatctcacgacttggag
caggatcagactctgctggacagaatggcggacaacattgcctcgtcatgggtcaattcc
agtaattttaaggttgcattgctgggaatggacctgttgtcagccttagtaaccaggttg
caggatcgcttccgttcccaaataggaacagtcctgcccagtctgatagaccgcttaggg
gacgccaaggaccaggtgagggaccaggaccaaactctgctgctgaagatcatggagcaa
gcggccacgccacagtacgtgtgggatcgaatgttgggcggattcaaacacaaaaacaac
aggaccagagaaggagtctgcctctgccttatctccacccttaatttatatggagcccaa
ggactcaccctcagcaaaattgtacctcacatatgtaacctgttaggagacccaacaagt
caggttcgtgacggagccatgaactgcttggtggagatctacagacacgtgggggagagg
gtgcgcatggacctgggaaagaaaggccttccccagtcccgcttgaatgtaatttttagc
aaatttgacgaagtccaaagatcggggaacatgattctctcctctgataagaacatcgac
gatgacgactctgtggacggggggcgttcctcgtcctctaagggggcgtcgtcagtgcga
cgggcaggaaacaccggctccatgcgccggcctagctccgcctccagctccaaatccaca
ggtaaagagggtggcagcgccggggccgtggatgaggaggacttcatccgtgcctttgac
gacgtgcccacagtacagatctactcgggccgcgagctggaggactccatgaacaagatc
cgcgaggtcctgtcagacgagcgtcaggactgggagcagagggtcaccgcgctgaagaag
gtgcgctcgttgctgctggccggtgctctggagtatgacgggctccctcagcatctgcgt
cagatggagccggccttcaagctctcggccaaagacctgcgctcacaggtggtgcgagag
gcctgcatcacgctggggcatctgtccgtgttgctgggtaaccgctttgaccacggcgcg
gagtccatcatgcccacgctgctcaacctggtgcccaacagcgccaagatcatcgccacg
tccggagtggctgtcgtccgcatcatcctgcgtcacacccactaccctcgactcatcccc
atcatcaccagcagctgcatctccaaatctgtggccatccgacggcgctgttttgagttc
ctggacctgatcttacaggagtggcccacaaacgctctcgaaaggcatgttgcagtgctc
agcgagaccgtcaagaaaggagtacacgacgcagactcggaggccagatctgtggccaga
aagtgttattggggtttccatggccacttcagccgggaggcggagcaactgttccaggct
ctggagctgtcctatcagaaggctcttcagtcccacctcaagggctctgacagcgtcatg
tccctcccccaatcagatcgctcctcttccagttcccaggagagcctcaaccggccgcta
tcgaagagcagctttggcgcaggcagaactcccaaggcggttccctcgcgagcgactcca
ggctcctcctccctgcagcgttcccgtagcgacatcgatgtgaatgccgcagccagtgcc
aagtctcgcatgccctcagtgcccagtgctgcccccttcagctccgccaacgcactgccc
cccggctcctacgcctccctagatggcggtacccctggtaaagtggagggtcgtgtacgc
actaggagaccaagtgctggcagcacagcaggaagtgtcaccccagccacagacagcagg
gggcgcagtcgagctaaagtggtgtctcagtctcagccgggcagtcgttccagctcgccc
gggaagctgctgggtcacacgtacgggcgtattcctcgtccgacgggagccgcgacgcca
gcggacggcaggcggagtcgcattccccgcagccagggctgcagccgcgagaccagcccc
acacgctctggctcggcgcgggtgagccgtattccgcggcccagtgcgagtcagggctgc
agtcgtgacacgagtcgcgagagcagccgtgacaccagccccgcccgtggcttcaccccg
ctggtgtcacgacgtcactcccgctccacgagcgcgctcacaacggccgacccactcggc
tactcagaccgttttggccttgcccaccaggctcggatctcggcctccgttaacgccatg
cgcatcctcaacacgggcactgatgtggaggcggcagtggcagacgctctgcttttaggg
gactccaggaacaagcggaggccgatgcggcgccggtacgagtcgccggggatctactcg
gacgacgacgccaacagcgatgcgtccagcgcctgctcggagcgctcgtacggctcgcgc
aacggaggcatgccgcactacctgcgccagacggaggacgtggccgaggtgctcaaccac
tgcgccagctccaactggtccgagaggaaggagggcctgctgggcctgcagaacctgctc
aagagccagcgcatcctcagtcgcgtggagttgaagcggctttgtgagattttcaccaga
atgtttgcagacccacacagcaaggtgttcagcatgttcctggagacgctggtggacttc
atcatggtgcaccgtgaggacctgcaggactggctcttcgtgctgctcacgcagctgctc
aagaagatgggcgccgacctgctgggctccgtccaggccaaggtccagaaggccctcgat
gtcaccagggattcctttccgtacgatcagcagttcaacatcctgatgcggtttatcgtc
gaccagacacaaacacccaacctcaaggtgaaggtggccatcttgaagtacatcgacctg
ctcgcccgccagatggaccccacggacttcgtcaactccagcgagacgcggctggccgtc
tcgcgcatcatcacgtggaccaccgagcccaaaagctccgacgtccgcaaggcagctcag
atggtcctgatctctctgtttgagttgaacactccggagttcaccatgctgctgggagcg
ctgcccaagaccttccaggacggagccaccaagctcctacacaaccacctcaagaactcc
agcaacgctgccgctgtgggttctccgagtaacacagttggtcggacccctgctccccgc
caccccagtagtcgcaccagtcccctcacctcccccaccaactgctcccatggagggctc
tcacccagcatgatggagtacgacacagagaacatgaactctgacgagatctacagctct
ctgcgtggcgtgacggaggccatccagaacttcagcttccgcagccaggaggacgtcatg
gagcccgtcagacgggacggcaagagagacgacccggctggtggaatggcgtcgtcgggg
gcggagcagcgtgtggacgtggtggacggcggtagtggcggcggccggacggcgctggac
aacaagacgtccctcctgaacacgccgtctccgcgctccttcagcgggccgcgcggccgc
gactacaacccctacaactacaccgacaccatcagcggctacgaccgcagcgccctcaag
gaggccgtgttcgacgacgacgcagagcacttcagagacggtcgtcgacagcaggaaggt
ggtgagaataagatcatgcaccccaaggccttcccaacaggagcagggcagcagctggag
ctggtgggggacctgctgaaggagttgtccagctccatgggggaccgcgtggaggagcgg
cgcacggcgctgctggagctgctcaaggtgacgcgcgaggactgcctggccgtctgggac
gagcacttcaagaccatgctgctgctgctgctggagacgctcggggataaagaccacacc
attcgggccctggcgctccgggttctgagagaggtcttacggaaccagccggcccgcttc
aagaactatgcagaactcaccatcatgaagaccctggaggctcacaaggactcccataaa
gaggtggtgcgtgcggcggaggaggcggcctccaccctggccagctccatccacccggag
cagtgcatcaaggtgctgtgccccatcgtgcagacggccgactaccccatcaacctggcc
gccatcaagatgcagaccaaagtcatcgagcgcatcgccaaggactcactcatcacgctg
ctgcccgacatcatccccggcctgctgcagagctacgataacactgagagtagtgtgcgc
aaggcgagtgtgttctgtctggtggccatctactctgtgatcggagaggacctcaagcct
cacctggcccagctcacgggcagcaagatgaagctgctgaacctgtacatcaagagggcc
cagaccaccaacagcaacagcagcagctcttcagacgtctcctcccacagctaa
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integrated database retrieval system
