Sardina pilchardus (sardine): 134072262
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Entry
134072262 CDS
T10667
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134072262 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spil03019
]
134072262 (nup98)
03036 Chromosome and associated proteins [BR:
spil03036
]
134072262 (nup98)
Messenger RNA biogenesis [BR:
spil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134072262 (nup98)
Chromosome and associated proteins [BR:
spil03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
134072262 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
CAF1-p150_C2
Motif
Other DBs
NCBI-GeneID:
134072262
NCBI-ProteinID:
XP_062384840
LinkDB
All DBs
Position
24:complement(8294338..8351623)
Genome browser
AA seq
1791 aa
AA seq
DB search
MFNKSFGAPFGGGTGGFGTTSTFGQQQTTSFGAATGGFGSSAFGTTNTTGGLFGAAQNKP
GGLFGSSTFSQPVTSAPSSGFGFGTASGTSNSLFGSANTAGAGLFSQQSNAFGTNKPASF
GTFGTSTSSGGGLFGATNTQTSNPFGGTSGSLFGAASFTPAQPGTTLKFNPPTGSDTMVK
GGVTTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPSNPMTAATGGLFGTAAAAPP
STAAGLFGASANNTGFSFGQNKTAFGTSTGGFGTASSSLFGQQPPPQQTASLFKPFGQAT
TTQQTTGFSFGAANTLGQPNTSSMGLFGNTAVSQAGGLFGATANTSTATGFGATSGLFGQ
PNTGFGAVGPQSQTLFGNKPGGFGTTTTSAPSFGTGLFGNKPTLTLGANTNTANFGFGAN
PAGGSLFGNKTAATGLGTGLGAGFGAAVGTGQTSLFGNNQNKLGSTLGTVNAFGTSAFNT
GTGTLGLGAPQQPISLTDPSAAATQQAVLQQQINALAYSPFGDSPLFRNPLSDPKKKEER
LKPTNPAAQKALVTTTHYKLTPRPATRVRPKALTPSGTLKSVLFDGLDDDEPSLTNGTFV
PRKNIKKLVLKNLTSSSLSAVDRDVDDLASPPEYPLSCIEESEEANQADMAGEDSPTLPE
SLDPQSTVCDFNLSKTGSEAGNQNDSTYLDPINEETFMKDDSLPEELQEEQSPHPAGVVL
HRVGYYTIPSLDELSRMLNENGECVVENFTIGRKGYGSVFFPGAVNLTNLNLDEIVHFRR
KEIIIYPDDMTKPLEGEGLNRRAEVTLDGVWPNDKTTCSQIKSPDRLADMNYEGRLETAS
RKQGARFLEYRPETGSWVFEVAHFSKYGLQDSDEEEESNLTKTDLKKVKTGLVPPAAGLQ
SAPPNAQQLGSQLSQNLVLPELLGHVSEMDSDMADITQEPTVDVLEEDDFGSPVALEHQL
AESDSLHQPLMSSHIPSSLGINPHTLQIMKASLFVGDDDGDPYQQDASESPMSSSLQTLM
QERRYGLGITKGLLSYHQEAQSNASPAKQMKQFLMSPDPYMGLSSHGLSQAQPMLEATMR
TVGVRHLGGPVPIANSVTQGKRRLLMDAALFAGRSFRVGWGPGWKLAHSGEALSTSEVSD
ITKEQLCVDSIGFSAKPTSSKTGPFQVRLEQVASLESKESELDQCLYLHPLEISRKYSTI
STEENCPFIQPQPGVHALQDYAQWITKVNEDGSTNAVLSHWQQIWTLCKALWGGLTDASE
EENVEQDCCGSYKQQLERRQSFSAWLACAAETRICQELGVATQHSPTEAIFSYLTGHKIS
EACKLAQQSGDHRLSLLLSQAAGLPYSQELLALQLGDWNRMQIGSCLQEERLRIYALLAG
KPVWQSTNSCINVCAELDWQRCIAVHLWYMLPPTASISDALTKYETAFQGSSDELKYACA
PLPPYLESCDLACIEEEIEEEGVKKPLYDICFHLLKLYSDRHHNLQQLLDPSTVTIQRLD
YRLCWHLWNVLQSLNYTHLSPECQARLHSSYAAQLESAGHWELSIFVLLHIPNAMHRERA
VREMLCSYCSLRETEDSAEKESFLTTMLQIPVHWIHEAKAIRARHDSDKHQEALHLYHAR
SWSQCHRLVIHHLAADCIINDNHEYLLHILEGLAVPERHAQIQDWDVSGRVFLDYIHVIQ
TLQSIQQMDGPGYELERLYTEVTSLCSRIELLPCVSAKDRLAQSEMAKRLANILRAVLAL
QQGGDATSDLPLIPLYCLAPHIGRLPMPEDYALEELRSLTQSYLRELILSQ
NT seq
5376 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaagtcatttggtgctccgtttggaggtggaactgggggatttggtacaaca
tccacttttggccaacaacaaaccacaagttttggagcagcaacaggtggttttggatcg
tcagcctttggcaccacaaacactacaggtggtctctttggagctgcacagaataaacca
ggtggactctttggatctagcactttcagccaaccagtaacttcagcccccagtagtggg
tttggctttggcaccgcaagtggaacatctaacagtctatttggaagcgccaacactgca
ggggctggtctcttttcccagcaaagcaatgccttcggtaccaacaaaccagcttccttt
ggcacctttgggaccagcaccagcagcggtggtggactatttggtgcaaccaatacccaa
acctcaaacccatttggaggcacctctgggtcactttttggggctgcaagtttcactcct
gcccaaccggggacaacacttaaatttaatcccccaacaggaagtgataccatggtcaaa
ggtggagtgacgaccagtatcaacacaaaacatcaatgcatcacagccatgaaggaatat
gagaacaaatctttggaagaactccgactggaggattaccaggcggggaggaagggtccc
tccaacccgatgacagctgctacaggaggtctgtttgggaccgccgctgccgctccaccc
agcacagctgctgggctgtttggcgcctctgcaaacaacacaggcttctccttcggacag
aataagaccgcatttggaacgagcacggggggatttggtacagcatcaagcagtcttttt
ggtcaacagccacctccccaacaaactgccagtctcttcaagccctttggccaggctaca
acaacgcaacaaactacggggttttcttttggcgctgccaatactttgggacagcccaac
accagcagtatgggcttgtttggtaacacagctgtgtctcaggctggaggcctgtttggg
gccacggcaaacaccagcacggctacagggtttggtgcaacttcagggctctttggccag
cccaacactggctttggtgccgttggcccacagtcacagacattgtttgggaacaaacct
ggtggttttgggacgaccacaacaagtgccccgtcctttggaacgggactgtttggaaac
aagcctacacttacattgggcgctaacacgaacactgctaattttggttttggtgccaac
ccagccggaggaagcctctttggtaacaagactgctgcaactgggctagggacaggcctt
ggagctggctttggggcagctgttggcactggacagacttctctctttggaaataaccag
aacaagctgggttctaccttaggaacagtgaatgctttcggaacatcggcatttaacact
ggcactggcaccctcggccttggtgcccctcagcagcccatttccctcacagacccgagt
gcagcagcaacacagcaggcggttctacagcaacagataaacgcactggcatactctccc
tttggggactctccacttttcagaaatcccttgtctgaccccaagaagaaggaggagcgc
ctgaagcccaccaatcctgcagcccaaaaggctcttgttacaacaacccactataaactg
acccctagaccggcaacacgtgtacggccaaaagcacttactccttcgggcaccttaaag
tcagtgctctttgatggactggatgatgatgagccctccttgaccaatggaacctttgtg
cctaggaagaacatcaagaagctggtgctgaagaatcttaccagtagcagcctctcagct
gtggacagggacgtagatgaccttgcctcacctccagagtatccactaagttgcatagag
gagtctgaagaagcgaaccaagcagacatggctggtgaagattctcctacattgccagaa
tcccttgacccacagagcactgtgtgtgattttaacttatctaaaactggaagtgaggca
ggaaaccaaaatgacagcacctacctggaccccatcaacgaggagactttcatgaaggac
gactctcttcctgaggagctacaggaagaacagtcccctcacccagcaggggtagttctc
catcgtgtgggctactacactatcccatcattggatgagctcagcaggatgctgaatgag
aatggcgagtgtgtggtggagaacttcaccattggccggaaaggctatggttcagtattc
ttccctggtgcagtgaatttgaccaatctgaacctggatgaaatcgtgcattttagacgg
aaggaaataattatatatcctgatgacatgaccaaacctctggagggggaagggcttaac
agacgcgctgaagtgactctagatggagtttggccgaatgacaagactacttgtagccag
ataaaaagccctgatcgtttggctgacatgaactatgagggaagattggagacagcgtcc
cggaagcaaggtgcacgcttccttgagtaccgacccgagacaggttcttgggtatttgag
gttgctcacttttccaagtatggattacaagactcggacgaggaggaagaaagcaatttg
acaaagacagatttaaaaaaagtcaagactgggcttgttcctccagcggcaggtttgcag
tcagcgcccccaaacgctcaacagctggggtctcaactgtctcagaatttggttttacct
gagcttctgggccatgtgtctgagatggatagtgacatggcggacattacacaagagccc
actgtggatgttttggaagaggacgattttggaagtcctgtggcattagagcatcagctg
gcagaatctgatagcctccatcaaccactcatgtcaagtcacatcccctcgtccttgggt
atcaaccctcacacacttcagatcatgaaggcatctttgtttgttggggatgatgatgga
gatccttaccaacaagatgcatcagagtctccgatgtcctcatctcttcaaactctgatg
caggaaagacgatacggactgggcatcaccaaaggccttttgtcatatcaccaagaagca
cagagtaatgcctcacctgcaaagcagatgaaacaattccttatgagccctgacccatac
atgggtttgtcaagccacggtctctcacaagctcaaccgatgttggaggcaactatgcgc
acagtgggagttcgccatcttggtggccctgtacctatcgcaaactcagtgactcaaggt
aaaaggcggctgctcatggatgctgccttgtttgctggccgctcattccgtgttggttgg
ggccctggatggaaactggcacacagtggcgaagcactctctaccagtgaagtctccgac
atcacaaaggaacaactctgtgttgacagcataggcttttcggctaaacccacctcaagc
aagactggtcccttccaagtccgcctcgagcaggtagcaagtctagaatccaaggagtcg
gagttggaccagtgtttgtatctgcatcctctggagattagccggaaatacagcaccatc
agcactgaggagaactgtcccttcattcagccgcagccgggcgtacatgcgcttcaggat
tatgctcaatggattaccaaggtcaatgaagatggcagcacgaatgctgtgctgagccat
tggcagcagatatggactctctgcaaggcactctggggtggacttactgacgccagtgaa
gaagagaatgttgaacaagactgttgtggttcttacaaacagcagctagaacgaagacaa
agtttctctgcatggcttgcttgtgcagctgaaacacgtatttgccaggagcttggtgtg
gcaactcagcacagcccaacagaggccatcttcagctacttaacaggacacaagatcagt
gaagcctgcaagctggcacaacaaagtggagaccaccgtctgtctttactgttgtctcag
gcagcaggcttgccatacagccaagaacttctggcacttcagcttggtgactggaacagg
atgcaaataggttcttgtctacaggaagagagactccgtatttatgccctcttggcaggc
aaaccagtatggcaatctacgaacagctgtataaatgtttgtgctgagctggactggcag
cgctgtattgcagtgcacctgtggtacatgcttcctcccactgcctctatttccgacgca
ttgaccaaatacgagactgcttttcagggttcgtcggatgaactgaaatatgcttgcgct
ccccttcctccctatctggagagttgtgaccttgcttgcatagaagaggaaattgaggag
gaaggggtaaagaagcccttgtacgacatatgcttccacttgctgaaactctacagtgac
cgacaccataacctgcagcagctattggatcccagcaccgtaacaatccagcgcctggac
taccgactttgctggcatttgtggaatgtgctccagtcgttaaactacacccatctttca
cctgagtgccaggcccggctccactcaagctatgctgcccagctggagagtgctggtcac
tgggagttgtccatctttgtgttgttgcatatacccaacgcgatgcaccgtgagcgagct
gttcgtgaaatgttgtgctcttactgctcactacgggagactgaggattcggcagaaaaa
gagtcttttctcacaacgatgctgcagatccctgttcactggattcatgaggctaaggcc
atccgtgcacgccatgattcagacaagcaccaagaagcattgcacctctatcatgccagg
agttggagtcaatgccaccgcttggtcattcatcacctagcagcagactgcatcataaat
gacaaccatgaatacctactgcatatcctagaaggtcttgctgtgccagagcgccatgca
cagatacaggactgggatgtttctggtagagtgtttctggactacatccatgtcatccaa
acactgcaatccatccagcagatggatggtccaggctatgagctggaaagactctacact
gaggtgacatccctttgcagcagaattgagctcctcccgtgcgtttcagctaaggataga
cttgctcagtcagaaatggcaaaacgtttggccaacatcctccgtgcagtcctggcttta
caacaagggggcgatgcgacatcagacctccccctcatcccactgtactgcctggcgcct
cacattggccggctgcccatgcctgaagattatgctctagaggagctccgcagcctcacc
cagtcttacctgcgcgagctcatcctcagtcagtga
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integrated database retrieval system
